EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005019059 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 18260 bases
Position: chrPSZQ01002222.1:5283150-5301409
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005028046	RtcB	PF01139.17	7.8e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005030460	RTCB-201	1844	-	ENSEASP00005028046	505 (aa)	-	UPI000156076E

Gene Model

Click here to download ENSEASG00005019059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005019059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005019059	RTCB	100	99.802	ENSG00000100220	RTCB	100	99.802	Homo_sapiens
ENSEASG00005019059	RTCB	100	94.851	ENSAPOG00000006040	rtcb	100	94.851	Acanthochromis_polyacanthus
ENSEASG00005019059	RTCB	100	99.604	ENSAMEG00000016152	RTCB	100	99.604	Ailuropoda_melanoleuca
ENSEASG00005019059	RTCB	100	90.495	ENSACIG00000009083	rtcb	100	90.495	Amphilophus_citrinellus
ENSEASG00005019059	RTCB	100	95.050	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSEASG00005019059	RTCB	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSEASG00005019059	RTCB	100	95.050	ENSAPEG00000024701	rtcb	100	95.050	Amphiprion_percula
ENSEASG00005019059	RTCB	100	94.653	ENSATEG00000000618	rtcb	100	94.653	Anabas_testudineus
ENSEASG00005019059	RTCB	100	94.027	ENSACAG00000014817	RTCB	100	94.027	Anolis_carolinensis
ENSEASG00005019059	RTCB	72	97.222	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSEASG00005019059	RTCB	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSEASG00005019059	RTCB	100	93.465	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSEASG00005019059	RTCB	100	94.653	ENSAMXG00000042320	rtcb	100	94.653	Astyanax_mexicanus
ENSEASG00005019059	RTCB	100	99.406	ENSBTAG00000011070	RTCB	100	99.406	Bos_taurus
ENSEASG00005019059	RTCB	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
ENSEASG00005019059	RTCB	100	99.406	ENSCJAG00000006128	RTCB	100	99.406	Callithrix_jacchus
ENSEASG00005019059	RTCB	100	99.604	ENSCAFG00000001785	RTCB	100	99.604	Canis_familiaris
ENSEASG00005019059	RTCB	100	95.248	ENSCAFG00000010789	-	100	95.248	Canis_familiaris
ENSEASG00005019059	RTCB	100	99.604	ENSCAFG00020004890	-	100	99.604	Canis_lupus_dingo
ENSEASG00005019059	RTCB	87	95.909	ENSCAFG00020018953	-	99	95.909	Canis_lupus_dingo
ENSEASG00005019059	RTCB	100	99.604	ENSCHIG00000027009	-	100	99.604	Capra_hircus
ENSEASG00005019059	RTCB	100	99.406	ENSTSYG00000012320	RTCB	100	99.406	Carlito_syrichta
ENSEASG00005019059	RTCB	94	99.161	ENSCAPG00000011647	RTCB	96	99.161	Cavia_aperea
ENSEASG00005019059	RTCB	100	99.406	ENSCCAG00000000618	RTCB	100	99.406	Cebus_capucinus
ENSEASG00005019059	RTCB	100	99.406	ENSCATG00000033424	RTCB	100	99.406	Cercocebus_atys
ENSEASG00005019059	RTCB	100	99.208	ENSCLAG00000007997	RTCB	100	99.208	Chinchilla_lanigera
ENSEASG00005019059	RTCB	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSEASG00005019059	RTCB	100	84.950	ENSCHOG00000009123	RTCB	100	84.950	Choloepus_hoffmanni
ENSEASG00005019059	RTCB	100	96.832	ENSCPBG00000023184	RTCB	100	96.832	Chrysemys_picta_bellii
ENSEASG00005019059	RTCB	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSEASG00005019059	RTCB	100	82.178	ENSCSAVG00000008124	-	99	82.178	Ciona_savignyi
ENSEASG00005019059	RTCB	100	95.644	ENSCANG00000001891	RTCB	100	95.644	Colobus_angolensis_palliatus
ENSEASG00005019059	RTCB	100	99.604	ENSCGRG00001011173	Rtcb	100	99.604	Cricetulus_griseus_chok1gshd
ENSEASG00005019059	RTCB	93	99.575	ENSCGRG00000009587	-	96	99.575	Cricetulus_griseus_crigri
ENSEASG00005019059	RTCB	100	93.663	ENSCSEG00000003986	rtcb	100	93.663	Cynoglossus_semilaevis
ENSEASG00005019059	RTCB	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSEASG00005019059	RTCB	100	94.257	ENSDARG00000101047	rtcb	100	94.257	Danio_rerio
ENSEASG00005019059	RTCB	80	96.560	ENSDNOG00000012425	RTCB	99	96.560	Dasypus_novemcinctus
ENSEASG00005019059	RTCB	100	99.208	ENSDORG00000010855	Rtcb	100	99.208	Dipodomys_ordii
ENSEASG00005019059	RTCB	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSEASG00005019059	RTCB	100	92.475	ENSETEG00000001988	RTCB	100	92.475	Echinops_telfairi
ENSEASG00005019059	RTCB	100	85.545	ENSEBUG00000014235	rtcb	100	85.545	Eptatretus_burgeri
ENSEASG00005019059	RTCB	100	100.000	ENSECAG00000023998	RTCB	100	100.000	Equus_caballus
ENSEASG00005019059	RTCB	89	90.157	ENSEEUG00000006251	RTCB	100	90.157	Erinaceus_europaeus
ENSEASG00005019059	RTCB	100	82.987	ENSELUG00000009275	rtcb	100	82.987	Esox_lucius
ENSEASG00005019059	RTCB	100	99.802	ENSFCAG00000026480	RTCB	100	99.802	Felis_catus
ENSEASG00005019059	RTCB	100	97.822	ENSFALG00000013334	RTCB	100	97.822	Ficedula_albicollis
ENSEASG00005019059	RTCB	100	99.604	ENSFDAG00000018150	RTCB	100	99.604	Fukomys_damarensis
ENSEASG00005019059	RTCB	100	94.257	ENSFHEG00000009595	rtcb	100	94.257	Fundulus_heteroclitus
ENSEASG00005019059	RTCB	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSEASG00005019059	RTCB	100	97.624	ENSGALG00000012611	RTCB	100	97.624	Gallus_gallus
ENSEASG00005019059	RTCB	100	94.653	ENSGAFG00000004198	rtcb	100	94.653	Gambusia_affinis
ENSEASG00005019059	RTCB	100	94.059	ENSGACG00000000586	rtcb	100	94.059	Gasterosteus_aculeatus
ENSEASG00005019059	RTCB	93	96.170	ENSGAGG00000019133	RTCB	98	96.170	Gopherus_agassizii
ENSEASG00005019059	RTCB	100	99.802	ENSGGOG00000011402	RTCB	100	99.802	Gorilla_gorilla
ENSEASG00005019059	RTCB	100	93.465	ENSHBUG00000020571	rtcb	100	93.465	Haplochromis_burtoni
ENSEASG00005019059	RTCB	93	70.551	ENSHGLG00000001066	-	99	70.551	Heterocephalus_glaber_female
ENSEASG00005019059	RTCB	100	99.604	ENSHGLG00000004492	RTCB	100	99.604	Heterocephalus_glaber_female
ENSEASG00005019059	RTCB	100	99.604	ENSHGLG00100008965	RTCB	100	99.604	Heterocephalus_glaber_male
ENSEASG00005019059	RTCB	100	91.716	ENSHCOG00000006450	rtcb	100	91.716	Hippocampus_comes
ENSEASG00005019059	RTCB	100	94.851	ENSIPUG00000015443	rtcb	100	94.851	Ictalurus_punctatus
ENSEASG00005019059	RTCB	100	99.406	ENSSTOG00000003878	RTCB	100	99.406	Ictidomys_tridecemlineatus
ENSEASG00005019059	RTCB	100	99.208	ENSJJAG00000010667	Rtcb	100	99.208	Jaculus_jaculus
ENSEASG00005019059	RTCB	100	94.257	ENSKMAG00000013178	rtcb	100	94.257	Kryptolebias_marmoratus
ENSEASG00005019059	RTCB	100	94.455	ENSLBEG00000010566	RTCB	100	94.455	Labrus_bergylta
ENSEASG00005019059	RTCB	100	93.465	ENSLBEG00000000214	rtcb	100	93.465	Labrus_bergylta
ENSEASG00005019059	RTCB	100	95.644	ENSLACG00000013033	RTCB	100	95.644	Latimeria_chalumnae
ENSEASG00005019059	RTCB	100	94.851	ENSLOCG00000016515	rtcb	99	94.851	Lepisosteus_oculatus
ENSEASG00005019059	RTCB	100	99.010	ENSLAFG00000002082	RTCB	100	99.010	Loxodonta_africana
ENSEASG00005019059	RTCB	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSEASG00005019059	RTCB	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSEASG00005019059	RTCB	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSEASG00005019059	RTCB	100	99.406	ENSMLEG00000040505	RTCB	100	99.406	Mandrillus_leucophaeus
ENSEASG00005019059	RTCB	100	94.653	ENSMAMG00000020676	rtcb	100	94.653	Mastacembelus_armatus
ENSEASG00005019059	RTCB	100	93.465	ENSMZEG00005018942	rtcb	100	93.465	Maylandia_zebra
ENSEASG00005019059	RTCB	100	97.239	ENSMGAG00000012805	RTCB	100	97.239	Meleagris_gallopavo
ENSEASG00005019059	RTCB	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSEASG00005019059	RTCB	100	80.198	ENSMICG00000036677	-	100	80.198	Microcebus_murinus
ENSEASG00005019059	RTCB	100	99.604	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
ENSEASG00005019059	RTCB	100	99.604	ENSMOCG00000002440	Rtcb	100	99.604	Microtus_ochrogaster
ENSEASG00005019059	RTCB	100	94.653	ENSMMOG00000005987	rtcb	100	94.653	Mola_mola
ENSEASG00005019059	RTCB	100	98.614	ENSMODG00000001414	RTCB	100	98.614	Monodelphis_domestica
ENSEASG00005019059	RTCB	100	94.455	ENSMALG00000007603	rtcb	100	94.455	Monopterus_albus
ENSEASG00005019059	RTCB	100	99.604	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.604	Mus_caroli
ENSEASG00005019059	RTCB	100	99.604	ENSMUSG00000001783	Rtcb	100	99.604	Mus_musculus
ENSEASG00005019059	RTCB	100	99.604	MGP_PahariEiJ_G0031396	Rtcb	100	99.604	Mus_pahari
ENSEASG00005019059	RTCB	100	99.604	MGP_SPRETEiJ_G0016507	Rtcb	100	99.604	Mus_spretus
ENSEASG00005019059	RTCB	100	99.604	ENSMPUG00000012285	RTCB	100	99.604	Mustela_putorius_furo
ENSEASG00005019059	RTCB	100	96.844	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
ENSEASG00005019059	RTCB	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSEASG00005019059	RTCB	100	93.663	ENSNBRG00000017202	rtcb	100	93.663	Neolamprologus_brichardi
ENSEASG00005019059	RTCB	100	99.802	ENSNLEG00000004960	RTCB	100	99.802	Nomascus_leucogenys
ENSEASG00005019059	RTCB	100	73.267	ENSMEUG00000007809	-	100	73.267	Notamacropus_eugenii
ENSEASG00005019059	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSEASG00005019059	RTCB	100	65.545	ENSODEG00000005042	-	100	65.545	Octodon_degus
ENSEASG00005019059	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSEASG00005019059	RTCB	100	94.653	ENSONIG00000007474	rtcb	100	94.653	Oreochromis_niloticus
ENSEASG00005019059	RTCB	100	98.614	ENSOANG00000005524	RTCB	100	98.614	Ornithorhynchus_anatinus
ENSEASG00005019059	RTCB	93	99.362	ENSOCUG00000008270	RTCB	96	99.362	Oryctolagus_cuniculus
ENSEASG00005019059	RTCB	100	93.663	ENSORLG00000020093	rtcb	100	93.663	Oryzias_latipes
ENSEASG00005019059	RTCB	100	93.663	ENSORLG00020003706	rtcb	100	93.663	Oryzias_latipes_hni
ENSEASG00005019059	RTCB	100	93.861	ENSORLG00015002968	rtcb	100	93.861	Oryzias_latipes_hsok
ENSEASG00005019059	RTCB	100	93.465	ENSOMEG00000021278	rtcb	100	93.465	Oryzias_melastigma
ENSEASG00005019059	RTCB	100	99.010	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
ENSEASG00005019059	RTCB	100	99.604	ENSOARG00000018008	RTCB	100	99.604	Ovis_aries
ENSEASG00005019059	RTCB	100	99.802	ENSPPAG00000028667	RTCB	100	99.802	Pan_paniscus
ENSEASG00005019059	RTCB	100	99.802	ENSPPRG00000004038	RTCB	100	99.802	Panthera_pardus
ENSEASG00005019059	RTCB	94	96.421	ENSPTIG00000020499	RTCB	97	96.421	Panthera_tigris_altaica
ENSEASG00005019059	RTCB	100	99.802	ENSPTRG00000014287	RTCB	100	99.802	Pan_troglodytes
ENSEASG00005019059	RTCB	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSEASG00005019059	RTCB	100	93.267	ENSPKIG00000001881	rtcb	100	93.267	Paramormyrops_kingsleyae
ENSEASG00005019059	RTCB	91	98.043	ENSPSIG00000011690	RTCB	100	98.043	Pelodiscus_sinensis
ENSEASG00005019059	RTCB	100	94.851	ENSPMGG00000016672	rtcb	100	94.851	Periophthalmus_magnuspinnatus
ENSEASG00005019059	RTCB	100	99.604	ENSPEMG00000019548	Rtcb	100	99.604	Peromyscus_maniculatus_bairdii
ENSEASG00005019059	RTCB	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSEASG00005019059	RTCB	100	99.010	ENSPCIG00000009467	RTCB	100	99.010	Phascolarctos_cinereus
ENSEASG00005019059	RTCB	100	95.050	ENSPFOG00000003058	rtcb	100	95.050	Poecilia_formosa
ENSEASG00005019059	RTCB	100	94.851	ENSPLAG00000017663	rtcb	100	94.851	Poecilia_latipinna
ENSEASG00005019059	RTCB	100	95.050	ENSPMEG00000006227	rtcb	100	95.050	Poecilia_mexicana
ENSEASG00005019059	RTCB	100	94.653	ENSPREG00000018467	rtcb	100	94.653	Poecilia_reticulata
ENSEASG00005019059	RTCB	100	99.802	ENSPPYG00000011752	RTCB	100	99.802	Pongo_abelii
ENSEASG00005019059	RTCB	93	81.568	ENSPCAG00000013641	RTCB	100	81.568	Procavia_capensis
ENSEASG00005019059	RTCB	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSEASG00005019059	RTCB	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
ENSEASG00005019059	RTCB	100	93.465	ENSPNYG00000022760	rtcb	100	93.465	Pundamilia_nyererei
ENSEASG00005019059	RTCB	100	95.446	ENSPNAG00000009209	rtcb	100	95.446	Pygocentrus_nattereri
ENSEASG00005019059	RTCB	100	99.604	ENSRNOG00000004813	Rtcb	100	99.604	Rattus_norvegicus
ENSEASG00005019059	RTCB	100	90.514	ENSRBIG00000042090	RTCB	100	90.514	Rhinopithecus_bieti
ENSEASG00005019059	RTCB	100	94.455	ENSSBOG00000020085	-	100	94.455	Saimiri_boliviensis_boliviensis
ENSEASG00005019059	RTCB	94	99.578	ENSSHAG00000016277	RTCB	100	99.578	Sarcophilus_harrisii
ENSEASG00005019059	RTCB	100	94.059	ENSSFOG00015011572	RTCB	100	94.059	Scleropages_formosus
ENSEASG00005019059	RTCB	100	93.267	ENSSFOG00015000763	rtcb	100	93.267	Scleropages_formosus
ENSEASG00005019059	RTCB	100	90.891	ENSSMAG00000005096	rtcb	100	90.891	Scophthalmus_maximus
ENSEASG00005019059	RTCB	100	94.059	ENSSDUG00000012605	rtcb	100	94.059	Seriola_dumerili
ENSEASG00005019059	RTCB	100	94.059	ENSSLDG00000019458	rtcb	100	94.059	Seriola_lalandi_dorsalis
ENSEASG00005019059	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSEASG00005019059	RTCB	100	96.040	ENSSPUG00000012814	RTCB	100	96.040	Sphenodon_punctatus
ENSEASG00005019059	RTCB	100	95.050	ENSSPAG00000004623	rtcb	100	95.050	Stegastes_partitus
ENSEASG00005019059	RTCB	100	99.802	ENSSSCG00000000158	RTCB	100	99.802	Sus_scrofa
ENSEASG00005019059	RTCB	100	97.822	ENSTGUG00000010947	RTCB	99	97.822	Taeniopygia_guttata
ENSEASG00005019059	RTCB	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSEASG00005019059	RTCB	100	93.663	ENSTNIG00000002484	rtcb	100	93.663	Tetraodon_nigroviridis
ENSEASG00005019059	RTCB	100	86.337	ENSTBEG00000004418	RTCB	100	86.337	Tupaia_belangeri
ENSEASG00005019059	RTCB	93	98.723	ENSTTRG00000006417	RTCB	100	98.723	Tursiops_truncatus
ENSEASG00005019059	RTCB	100	99.604	ENSUAMG00000022792	RTCB	100	99.604	Ursus_americanus
ENSEASG00005019059	RTCB	100	99.604	ENSUMAG00000017225	RTCB	100	99.604	Ursus_maritimus
ENSEASG00005019059	RTCB	100	99.604	ENSVPAG00000005375	RTCB	100	99.604	Vicugna_pacos
ENSEASG00005019059	RTCB	100	99.604	ENSVVUG00000023408	RTCB	100	99.754	Vulpes_vulpes
ENSEASG00005019059	RTCB	100	94.851	ENSXETG00000011523	rtcb	100	94.851	Xenopus_tropicalis
ENSEASG00005019059	RTCB	100	94.653	ENSXMAG00000002855	rtcb	100	94.653	Xiphophorus_maculatus