EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005019360 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 18632 bases
Position: chrPSZQ01001984.1:3925359-3943990
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005028463	ResIII	PF04851.15	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005030918	CHD3-201	5793	-	ENSEASP00005028463	1833 (aa)	-	-

Gene Model

Click here to download ENSEASG00005019360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005019360's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005019360	CHD3	50	37.343	ENSEASG00005023433	CHD6	88	43.436
ENSEASG00005019360	CHD3	95	70.866	ENSEASG00005016150	-	90	70.670
ENSEASG00005019360	CHD3	86	84.834	ENSEASG00005021464	CHD5	90	83.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005019360	CHD3	100	98.854	ENSG00000170004	CHD3	99	93.913	Homo_sapiens
ENSEASG00005019360	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.416	Acanthochromis_polyacanthus
ENSEASG00005019360	CHD3	74	97.141	ENSAMEG00000003025	-	100	97.141	Ailuropoda_melanoleuca
ENSEASG00005019360	CHD3	86	80.273	ENSACIG00000019671	chd3	99	80.918	Amphilophus_citrinellus
ENSEASG00005019360	CHD3	86	81.031	ENSAOCG00000023784	chd3	97	81.747	Amphiprion_ocellaris
ENSEASG00005019360	CHD3	76	79.762	ENSAPEG00000006341	chd3	90	74.882	Amphiprion_percula
ENSEASG00005019360	CHD3	100	74.331	ENSATEG00000000848	chd3	99	73.783	Anabas_testudineus
ENSEASG00005019360	CHD3	100	85.135	ENSACAG00000004276	CHD3	89	84.886	Anolis_carolinensis
ENSEASG00005019360	CHD3	100	98.745	ENSANAG00000034323	CHD3	99	96.832	Aotus_nancymaae
ENSEASG00005019360	CHD3	93	81.029	ENSACLG00000009222	chd3	95	74.729	Astatotilapia_calliptera
ENSEASG00005019360	CHD3	100	98.092	ENSBTAG00000014377	CHD3	91	98.162	Bos_taurus
ENSEASG00005019360	CHD3	100	98.691	ENSCJAG00000014766	CHD3	92	98.691	Callithrix_jacchus
ENSEASG00005019360	CHD3	100	98.472	ENSCAFG00000016859	CHD3	92	98.472	Canis_familiaris
ENSEASG00005019360	CHD3	100	98.472	ENSCAFG00020007422	CHD3	100	98.472	Canis_lupus_dingo
ENSEASG00005019360	CHD3	100	98.582	ENSCHIG00000016737	CHD3	93	98.582	Capra_hircus
ENSEASG00005019360	CHD3	100	98.636	ENSTSYG00000035658	CHD3	99	96.133	Carlito_syrichta
ENSEASG00005019360	CHD3	100	95.090	ENSCAPG00000014864	CHD3	91	95.090	Cavia_aperea
ENSEASG00005019360	CHD3	100	97.818	ENSCPOG00000022653	CHD3	91	97.818	Cavia_porcellus
ENSEASG00005019360	CHD3	100	98.691	ENSCCAG00000034792	CHD3	92	98.691	Cebus_capucinus
ENSEASG00005019360	CHD3	100	98.691	ENSCATG00000041717	CHD3	92	98.691	Cercocebus_atys
ENSEASG00005019360	CHD3	100	98.036	ENSCLAG00000010523	CHD3	93	98.036	Chinchilla_lanigera
ENSEASG00005019360	CHD3	100	98.527	ENSCSAG00000011122	CHD3	93	98.527	Chlorocebus_sabaeus
ENSEASG00005019360	CHD3	92	86.792	ENSCPBG00000011966	CHD3	99	86.800	Chrysemys_picta_bellii
ENSEASG00005019360	CHD3	100	98.636	ENSCANG00000037641	CHD3	99	95.685	Colobus_angolensis_palliatus
ENSEASG00005019360	CHD3	100	97.219	ENSCGRG00001011306	Chd3	93	97.219	Cricetulus_griseus_chok1gshd
ENSEASG00005019360	CHD3	94	90.460	ENSCGRG00000007878	Chd3	92	90.052	Cricetulus_griseus_crigri
ENSEASG00005019360	CHD3	92	79.934	ENSCSEG00000004489	chd3	95	78.076	Cynoglossus_semilaevis
ENSEASG00005019360	CHD3	89	82.072	ENSCVAG00000007293	chd3	91	82.072	Cyprinodon_variegatus
ENSEASG00005019360	CHD3	93	82.215	ENSDARG00000021405	chd3	99	74.010	Danio_rerio
ENSEASG00005019360	CHD3	100	82.682	ENSDNOG00000047846	CHD3	84	92.914	Dasypus_novemcinctus
ENSEASG00005019360	CHD3	100	97.600	ENSDORG00000010713	Chd3	93	97.600	Dipodomys_ordii
ENSEASG00005019360	CHD3	98	93.419	ENSETEG00000017733	CHD3	93	93.419	Echinops_telfairi
ENSEASG00005019360	CHD3	58	77.666	ENSEBUG00000008310	chd3	99	70.494	Eptatretus_burgeri
ENSEASG00005019360	CHD3	100	99.836	ENSECAG00000010051	CHD3	100	99.836	Equus_caballus
ENSEASG00005019360	CHD3	92	94.915	ENSEEUG00000015205	CHD3	86	94.915	Erinaceus_europaeus
ENSEASG00005019360	CHD3	86	77.575	ENSELUG00000019499	chd3	99	77.311	Esox_lucius
ENSEASG00005019360	CHD3	100	98.145	ENSFCAG00000009629	CHD3	89	98.145	Felis_catus
ENSEASG00005019360	CHD3	100	97.981	ENSFDAG00000008220	CHD3	93	97.981	Fukomys_damarensis
ENSEASG00005019360	CHD3	90	80.406	ENSGMOG00000013599	chd3	86	80.914	Gadus_morhua
ENSEASG00005019360	CHD3	59	77.378	ENSGAFG00000004055	chd3	91	78.538	Gambusia_affinis
ENSEASG00005019360	CHD3	99	72.195	ENSGACG00000019275	chd3	94	72.571	Gasterosteus_aculeatus
ENSEASG00005019360	CHD3	82	85.762	ENSGAGG00000013164	CHD3	98	86.409	Gopherus_agassizii
ENSEASG00005019360	CHD3	100	98.691	ENSGGOG00000013496	CHD3	99	95.685	Gorilla_gorilla
ENSEASG00005019360	CHD3	100	97.981	ENSHGLG00000012017	CHD3	92	97.981	Heterocephalus_glaber_female
ENSEASG00005019360	CHD3	89	91.014	ENSHGLG00100013902	CHD3	92	91.014	Heterocephalus_glaber_male
ENSEASG00005019360	CHD3	96	74.346	ENSHCOG00000010170	chd3	90	74.959	Hippocampus_comes
ENSEASG00005019360	CHD3	90	80.567	ENSIPUG00000003271	chd3	96	79.778	Ictalurus_punctatus
ENSEASG00005019360	CHD3	100	98.472	ENSSTOG00000025907	CHD3	93	98.472	Ictidomys_tridecemlineatus
ENSEASG00005019360	CHD3	100	97.163	ENSJJAG00000017633	Chd3	93	97.163	Jaculus_jaculus
ENSEASG00005019360	CHD3	87	90.047	ENSKMAG00000019292	chd3	95	75.027	Kryptolebias_marmoratus
ENSEASG00005019360	CHD3	92	75.986	ENSLBEG00000028485	chd3	87	75.986	Labrus_bergylta
ENSEASG00005019360	CHD3	98	75.267	ENSLACG00000008031	CHD3	92	75.440	Latimeria_chalumnae
ENSEASG00005019360	CHD3	100	77.801	ENSLOCG00000013965	chd3	90	78.443	Lepisosteus_oculatus
ENSEASG00005019360	CHD3	96	94.178	ENSLAFG00000000572	CHD3	93	94.178	Loxodonta_africana
ENSEASG00005019360	CHD3	100	98.636	ENSMFAG00000020113	CHD3	99	96.887	Macaca_fascicularis
ENSEASG00005019360	CHD3	100	96.072	ENSMMUG00000022221	CHD3	92	95.541	Macaca_mulatta
ENSEASG00005019360	CHD3	100	98.636	ENSMNEG00000001728	CHD3	99	98.088	Macaca_nemestrina
ENSEASG00005019360	CHD3	100	98.691	ENSMLEG00000032249	CHD3	92	98.691	Mandrillus_leucophaeus
ENSEASG00005019360	CHD3	92	76.023	ENSMAMG00000000564	chd3	99	76.171	Mastacembelus_armatus
ENSEASG00005019360	CHD3	100	97.001	ENSMAUG00000013873	Chd3	99	94.253	Mesocricetus_auratus
ENSEASG00005019360	CHD3	100	98.309	ENSMICG00000008741	CHD3	92	95.321	Microcebus_murinus
ENSEASG00005019360	CHD3	100	97.219	ENSMOCG00000004848	Chd3	93	97.219	Microtus_ochrogaster
ENSEASG00005019360	CHD3	98	75.194	ENSMMOG00000012699	chd3	95	74.917	Mola_mola
ENSEASG00005019360	CHD3	100	92.803	ENSMODG00000007509	CHD3	100	92.857	Monodelphis_domestica
ENSEASG00005019360	CHD3	100	96.895	MGP_CAROLIEiJ_G0016564	Chd3	93	95.429	Mus_caroli
ENSEASG00005019360	CHD3	100	97.004	ENSMUSG00000018474	Chd3	93	95.541	Mus_musculus
ENSEASG00005019360	CHD3	100	97.221	MGP_PahariEiJ_G0017695	Chd3	93	95.761	Mus_pahari
ENSEASG00005019360	CHD3	100	97.004	MGP_SPRETEiJ_G0017400	Chd3	93	95.541	Mus_spretus
ENSEASG00005019360	CHD3	93	98.133	ENSMPUG00000008861	CHD3	100	98.133	Mustela_putorius_furo
ENSEASG00005019360	CHD3	100	98.038	ENSMLUG00000014643	-	92	98.038	Myotis_lucifugus
ENSEASG00005019360	CHD3	100	97.709	ENSNGAG00000000773	Chd3	91	97.709	Nannospalax_galili
ENSEASG00005019360	CHD3	93	74.985	ENSNBRG00000000636	chd3	97	75.704	Neolamprologus_brichardi
ENSEASG00005019360	CHD3	98	95.485	ENSNLEG00000009770	CHD3	93	95.204	Nomascus_leucogenys
ENSEASG00005019360	CHD3	87	91.484	ENSMEUG00000005852	CHD3	82	91.484	Notamacropus_eugenii
ENSEASG00005019360	CHD3	100	96.454	ENSOPRG00000011069	CHD3	98	96.454	Ochotona_princeps
ENSEASG00005019360	CHD3	100	97.818	ENSODEG00000017785	CHD3	92	97.818	Octodon_degus
ENSEASG00005019360	CHD3	98	76.287	ENSONIG00000009292	chd3	94	76.780	Oreochromis_niloticus
ENSEASG00005019360	CHD3	100	92.997	ENSOCUG00000029299	CHD3	94	92.838	Oryctolagus_cuniculus
ENSEASG00005019360	CHD3	85	71.546	ENSORLG00000007107	chd3	88	71.447	Oryzias_latipes
ENSEASG00005019360	CHD3	56	75.362	ENSORLG00020008387	chd3	86	75.845	Oryzias_latipes_hni
ENSEASG00005019360	CHD3	76	80.357	ENSOMEG00000013691	chd3	99	77.031	Oryzias_melastigma
ENSEASG00005019360	CHD3	100	97.927	ENSOGAG00000003216	CHD3	93	97.927	Otolemur_garnettii
ENSEASG00005019360	CHD3	100	96.024	ENSOARG00000017855	CHD3	92	96.024	Ovis_aries
ENSEASG00005019360	CHD3	100	96.294	ENSPPAG00000032886	CHD3	99	95.108	Pan_paniscus
ENSEASG00005019360	CHD3	100	98.363	ENSPPRG00000000626	CHD3	92	98.363	Panthera_pardus
ENSEASG00005019360	CHD3	100	98.909	ENSPTRG00000008714	CHD3	99	95.955	Pan_troglodytes
ENSEASG00005019360	CHD3	100	98.691	ENSPANG00000023938	CHD3	99	96.942	Papio_anubis
ENSEASG00005019360	CHD3	97	79.025	ENSPKIG00000006305	chd3	94	78.870	Paramormyrops_kingsleyae
ENSEASG00005019360	CHD3	59	90.511	ENSPSIG00000010177	CHD3	98	90.785	Pelodiscus_sinensis
ENSEASG00005019360	CHD3	100	97.219	ENSPEMG00000014262	Chd3	93	97.219	Peromyscus_maniculatus_bairdii
ENSEASG00005019360	CHD3	100	93.075	ENSPCIG00000005442	CHD3	93	95.935	Phascolarctos_cinereus
ENSEASG00005019360	CHD3	98	74.450	ENSPFOG00000012464	chd3	86	75.644	Poecilia_formosa
ENSEASG00005019360	CHD3	89	83.806	ENSPLAG00000002887	chd3	92	72.788	Poecilia_latipinna
ENSEASG00005019360	CHD3	52	81.839	ENSPMEG00000016725	chd3	83	75.992	Poecilia_mexicana
ENSEASG00005019360	CHD3	91	84.133	ENSPREG00000011044	chd3	93	80.675	Poecilia_reticulata
ENSEASG00005019360	CHD3	100	95.908	ENSPPYG00000007940	CHD3	93	95.908	Pongo_abelii
ENSEASG00005019360	CHD3	96	98.010	ENSPCAG00000004350	CHD3	90	98.010	Procavia_capensis
ENSEASG00005019360	CHD3	100	98.309	ENSPCOG00000020952	CHD3	92	98.255	Propithecus_coquereli
ENSEASG00005019360	CHD3	86	98.799	ENSPVAG00000016344	CHD3	80	98.799	Pteropus_vampyrus
ENSEASG00005019360	CHD3	95	80.392	ENSPNAG00000020393	chd3	98	80.532	Pygocentrus_nattereri
ENSEASG00005019360	CHD3	100	96.786	ENSRNOG00000009722	Chd3	100	96.786	Rattus_norvegicus
ENSEASG00005019360	CHD3	100	95.264	ENSRBIG00000033562	CHD3	99	94.989	Rhinopithecus_bieti
ENSEASG00005019360	CHD3	100	96.999	ENSRROG00000029554	CHD3	99	96.452	Rhinopithecus_roxellana
ENSEASG00005019360	CHD3	100	98.909	ENSSBOG00000020719	CHD3	99	98.307	Saimiri_boliviensis_boliviensis
ENSEASG00005019360	CHD3	100	92.912	ENSSHAG00000014412	CHD3	93	92.966	Sarcophilus_harrisii
ENSEASG00005019360	CHD3	94	80.029	ENSSFOG00015023123	chd3	98	74.741	Scleropages_formosus
ENSEASG00005019360	CHD3	84	91.304	ENSSMAG00000006451	chd3	99	76.000	Scophthalmus_maximus
ENSEASG00005019360	CHD3	55	75.573	ENSSDUG00000005792	chd3	88	75.474	Seriola_dumerili
ENSEASG00005019360	CHD3	86	80.412	ENSSPAG00000013694	chd3	97	80.412	Stegastes_partitus
ENSEASG00005019360	CHD3	100	98.255	ENSSSCG00000021363	CHD3	100	98.255	Sus_scrofa
ENSEASG00005019360	CHD3	76	77.911	ENSTRUG00000014990	chd3	83	77.911	Takifugu_rubripes
ENSEASG00005019360	CHD3	100	73.735	ENSTNIG00000012998	chd3	93	73.836	Tetraodon_nigroviridis
ENSEASG00005019360	CHD3	68	97.619	ENSTBEG00000011454	-	71	97.619	Tupaia_belangeri
ENSEASG00005019360	CHD3	99	99.474	ENSTTRG00000010295	CHD3	90	99.474	Tursiops_truncatus
ENSEASG00005019360	CHD3	99	97.169	ENSUAMG00000005475	CHD3	99	97.169	Ursus_americanus
ENSEASG00005019360	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSEASG00005019360	CHD3	100	98.472	ENSVVUG00000028011	CHD3	96	98.472	Vulpes_vulpes
ENSEASG00005019360	CHD3	100	73.873	ENSXETG00000012991	chd3	90	73.566	Xenopus_tropicalis
ENSEASG00005019360	CHD3	50	91.892	ENSXCOG00000000809	chd3	85	82.976	Xiphophorus_couchianus
ENSEASG00005019360	CHD3	85	86.705	ENSXMAG00000016035	chd3	99	86.705	Xiphophorus_maculatus