EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005019997 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 17529 bases
Position: chrPSZQ01000869.1:421146-438674
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005030260	tRNA-synt_1g	PF09334.11	2.5e-15	1	1
ENSEASP00005030035	tRNA-synt_1g	PF09334.11	4.7e-15	1	1
ENSEASP00005030268	tRNA-synt_1g	PF09334.11	9.2e-15	1	1
ENSEASP00005030223	tRNA-synt_1g	PF09334.11	1e-14	1	1
ENSEASP00005030234	tRNA-synt_1g	PF09334.11	1e-14	1	1
ENSEASP00005030287	tRNA-synt_1g	PF09334.11	1.1e-14	1	1
ENSEASP00005030315	tRNA-synt_1g	PF09334.11	1.9e-11	1	1
ENSEASP00005030268	Anticodon_1	PF08264.13	2.2e-30	1	1
ENSEASP00005030315	Anticodon_1	PF08264.13	2.3e-30	1	1
ENSEASP00005030234	Anticodon_1	PF08264.13	2.3e-30	1	1
ENSEASP00005030223	Anticodon_1	PF08264.13	2.4e-30	1	1
ENSEASP00005030035	Anticodon_1	PF08264.13	2.5e-30	1	1
ENSEASP00005030287	Anticodon_1	PF08264.13	5.4e-27	1	1
ENSEASP00005030260	Anticodon_1	PF08264.13	4.3e-24	1	1
ENSEASP00005030223	tRNA-synt_1	PF00133.22	1.6e-183	1	1
ENSEASP00005030035	tRNA-synt_1	PF00133.22	3.7e-182	1	1
ENSEASP00005030260	tRNA-synt_1	PF00133.22	1.9e-169	1	2
ENSEASP00005030260	tRNA-synt_1	PF00133.22	1.9e-169	2	2
ENSEASP00005030268	tRNA-synt_1	PF00133.22	7.6e-166	1	2
ENSEASP00005030268	tRNA-synt_1	PF00133.22	7.6e-166	2	2
ENSEASP00005030234	tRNA-synt_1	PF00133.22	8.7e-166	1	2
ENSEASP00005030234	tRNA-synt_1	PF00133.22	8.7e-166	2	2
ENSEASP00005030287	tRNA-synt_1	PF00133.22	1.6e-164	1	2
ENSEASP00005030287	tRNA-synt_1	PF00133.22	1.6e-164	2	2
ENSEASP00005030315	tRNA-synt_1	PF00133.22	1.8e-164	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005032859	VARS2-202	3255	-	ENSEASP00005030223	1084 (aa)	-	-
ENSEAST00005032644	VARS2-201	2703	-	ENSEASP00005030035	900 (aa)	-	-
ENSEAST00005032900	VARS2-204	3018	-	ENSEASP00005030260	1005 (aa)	-	-
ENSEAST00005032959	VARS2-207	2571	-	ENSEASP00005030315	856 (aa)	-	-
ENSEAST00005032908	VARS2-205	3093	-	ENSEASP00005030268	1030 (aa)	-	-
ENSEAST00005032930	VARS2-206	2754	-	ENSEASP00005030287	917 (aa)	-	-
ENSEAST00005032870	VARS2-203	3180	-	ENSEASP00005030234	1059 (aa)	-	-

Gene Model

Click here to download ENSEASG00005019997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005019997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005019997	VARS2	94	52.706	ENSEASG00005015673	VARS	81	50.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005019997	VARS2	95	53.981	ENSAPOG00000007396	vars2	99	49.722	Acanthochromis_polyacanthus
ENSEASG00005019997	VARS2	99	88.029	ENSAMEG00000012997	VARS2	99	88.029	Ailuropoda_melanoleuca
ENSEASG00005019997	VARS2	94	55.556	ENSACIG00000004344	vars2	98	51.321	Amphilophus_citrinellus
ENSEASG00005019997	VARS2	95	53.388	ENSAOCG00000000476	vars2	99	49.406	Amphiprion_ocellaris
ENSEASG00005019997	VARS2	95	53.271	ENSAPEG00000008646	vars2	97	49.229	Amphiprion_percula
ENSEASG00005019997	VARS2	94	55.148	ENSATEG00000012291	vars2	96	51.585	Anabas_testudineus
ENSEASG00005019997	VARS2	96	60.310	ENSACAG00000022093	VARS2	97	58.040	Anolis_carolinensis
ENSEASG00005019997	VARS2	97	89.036	ENSANAG00000038018	VARS2	99	89.036	Aotus_nancymaae
ENSEASG00005019997	VARS2	95	54.748	ENSACLG00000018673	vars2	98	50.743	Astatotilapia_calliptera
ENSEASG00005019997	VARS2	95	56.975	ENSAMXG00000017773	vars2	97	53.938	Astyanax_mexicanus
ENSEASG00005019997	VARS2	99	88.899	ENSBTAG00000010698	VARS2	99	91.218	Bos_taurus
ENSEASG00005019997	VARS2	99	88.007	ENSCJAG00000019826	VARS2	99	88.931	Callithrix_jacchus
ENSEASG00005019997	VARS2	97	87.559	ENSCAFG00000000454	VARS2	99	87.559	Canis_familiaris
ENSEASG00005019997	VARS2	97	84.392	ENSCAFG00020019387	VARS2	95	87.687	Canis_lupus_dingo
ENSEASG00005019997	VARS2	99	88.626	ENSCHIG00000007847	VARS2	99	91.124	Capra_hircus
ENSEASG00005019997	VARS2	99	86.949	ENSTSYG00000009904	VARS2	99	88.230	Carlito_syrichta
ENSEASG00005019997	VARS2	87	83.791	ENSCAPG00000017770	VARS2	99	84.855	Cavia_aperea
ENSEASG00005019997	VARS2	98	84.206	ENSCPOG00000021834	VARS2	99	84.369	Cavia_porcellus
ENSEASG00005019997	VARS2	97	89.130	ENSCCAG00000037907	VARS2	99	89.130	Cebus_capucinus
ENSEASG00005019997	VARS2	99	89.154	ENSCATG00000032554	VARS2	99	90.198	Cercocebus_atys
ENSEASG00005019997	VARS2	97	84.652	ENSCLAG00000002889	VARS2	99	84.652	Chinchilla_lanigera
ENSEASG00005019997	VARS2	97	89.821	ENSCSAG00000008327	VARS2	99	89.821	Chlorocebus_sabaeus
ENSEASG00005019997	VARS2	94	62.094	ENSCPBG00000021502	VARS2	96	62.978	Chrysemys_picta_bellii
ENSEASG00005019997	VARS2	98	89.587	ENSCANG00000014991	VARS2	99	89.587	Colobus_angolensis_palliatus
ENSEASG00005019997	VARS2	96	83.397	ENSCGRG00001021535	Vars2	99	83.318	Cricetulus_griseus_chok1gshd
ENSEASG00005019997	VARS2	96	83.397	ENSCGRG00000014112	Vars2	99	83.318	Cricetulus_griseus_crigri
ENSEASG00005019997	VARS2	83	63.315	ENSCSEG00000015432	vars2	91	58.865	Cynoglossus_semilaevis
ENSEASG00005019997	VARS2	67	55.226	ENSCVAG00000017765	vars2	98	52.119	Cyprinodon_variegatus
ENSEASG00005019997	VARS2	96	55.828	ENSDARG00000056717	vars2	99	49.764	Danio_rerio
ENSEASG00005019997	VARS2	76	87.560	ENSDORG00000008516	Vars2	93	87.560	Dipodomys_ordii
ENSEASG00005019997	VARS2	97	76.727	ENSETEG00000014844	VARS2	99	76.727	Echinops_telfairi
ENSEASG00005019997	VARS2	97	98.023	ENSECAG00000018202	VARS2	100	98.023	Equus_caballus
ENSEASG00005019997	VARS2	65	83.495	ENSEEUG00000012591	-	67	83.495	Erinaceus_europaeus
ENSEASG00005019997	VARS2	94	55.413	ENSELUG00000017824	vars2	96	51.549	Esox_lucius
ENSEASG00005019997	VARS2	97	89.632	ENSFCAG00000010531	VARS2	99	89.632	Felis_catus
ENSEASG00005019997	VARS2	97	85.876	ENSFDAG00000017216	VARS2	99	85.876	Fukomys_damarensis
ENSEASG00005019997	VARS2	94	52.587	ENSFHEG00000013932	vars2	91	51.792	Fundulus_heteroclitus
ENSEASG00005019997	VARS2	95	56.905	ENSGMOG00000018960	vars2	98	55.285	Gadus_morhua
ENSEASG00005019997	VARS2	89	50.930	ENSGAFG00000004737	vars2	88	50.000	Gambusia_affinis
ENSEASG00005019997	VARS2	94	55.489	ENSGACG00000001464	vars2	99	53.683	Gasterosteus_aculeatus
ENSEASG00005019997	VARS2	95	62.589	ENSGAGG00000011652	VARS2	99	62.170	Gopherus_agassizii
ENSEASG00005019997	VARS2	97	89.350	ENSGGOG00000014587	VARS2	99	89.350	Gorilla_gorilla
ENSEASG00005019997	VARS2	97	54.104	ENSHBUG00000002448	vars2	99	49.438	Haplochromis_burtoni
ENSEASG00005019997	VARS2	99	81.792	ENSHGLG00000012886	VARS2	97	83.693	Heterocephalus_glaber_female
ENSEASG00005019997	VARS2	97	83.710	ENSHGLG00100016535	VARS2	99	83.710	Heterocephalus_glaber_male
ENSEASG00005019997	VARS2	64	56.281	ENSHCOG00000017907	vars2	95	51.329	Hippocampus_comes
ENSEASG00005019997	VARS2	95	57.092	ENSIPUG00000015573	Vars2	99	51.476	Ictalurus_punctatus
ENSEASG00005019997	VARS2	97	88.962	ENSSTOG00000009924	VARS2	99	88.962	Ictidomys_tridecemlineatus
ENSEASG00005019997	VARS2	97	83.664	ENSJJAG00000011144	Vars2	100	83.664	Jaculus_jaculus
ENSEASG00005019997	VARS2	94	54.079	ENSKMAG00000001393	vars2	96	51.240	Kryptolebias_marmoratus
ENSEASG00005019997	VARS2	94	55.674	ENSLBEG00000011949	vars2	96	51.143	Labrus_bergylta
ENSEASG00005019997	VARS2	61	63.357	ENSLBEG00000005480	-	81	63.587	Labrus_bergylta
ENSEASG00005019997	VARS2	94	54.000	ENSLACG00000001576	-	99	52.317	Latimeria_chalumnae
ENSEASG00005019997	VARS2	99	85.795	ENSLAFG00000015183	VARS2	99	88.352	Loxodonta_africana
ENSEASG00005019997	VARS2	97	89.538	ENSMFAG00000042367	VARS2	99	89.538	Macaca_fascicularis
ENSEASG00005019997	VARS2	97	89.632	ENSMMUG00000018609	VARS2	99	89.632	Macaca_mulatta
ENSEASG00005019997	VARS2	97	89.821	ENSMNEG00000043163	VARS2	99	89.821	Macaca_nemestrina
ENSEASG00005019997	VARS2	99	89.246	ENSMLEG00000041728	VARS2	99	89.246	Mandrillus_leucophaeus
ENSEASG00005019997	VARS2	94	53.927	ENSMAMG00000020339	vars2	96	50.144	Mastacembelus_armatus
ENSEASG00005019997	VARS2	95	54.631	ENSMZEG00005017669	vars2	98	50.651	Maylandia_zebra
ENSEASG00005019997	VARS2	97	83.710	ENSMAUG00000018946	Vars2	99	83.710	Mesocricetus_auratus
ENSEASG00005019997	VARS2	93	85.073	ENSMICG00000005365	VARS2	100	89.350	Microcebus_murinus
ENSEASG00005019997	VARS2	92	85.372	ENSMOCG00000014607	Vars2	99	85.372	Microtus_ochrogaster
ENSEASG00005019997	VARS2	97	53.864	ENSMMOG00000012122	vars2	97	50.335	Mola_mola
ENSEASG00005019997	VARS2	99	73.139	ENSMODG00000015848	VARS2	99	75.118	Monodelphis_domestica
ENSEASG00005019997	VARS2	94	55.291	ENSMALG00000009217	vars2	98	52.286	Monopterus_albus
ENSEASG00005019997	VARS2	97	84.166	MGP_CAROLIEiJ_G0021529	Vars2	99	84.166	Mus_caroli
ENSEASG00005019997	VARS2	97	83.789	ENSMUSG00000038838	Vars2	99	83.789	Mus_musculus
ENSEASG00005019997	VARS2	97	84.260	MGP_PahariEiJ_G0020523	Vars2	99	84.260	Mus_pahari
ENSEASG00005019997	VARS2	97	83.883	MGP_SPRETEiJ_G0022436	Vars2	99	83.883	Mus_spretus
ENSEASG00005019997	VARS2	97	89.161	ENSMPUG00000011643	VARS2	99	89.161	Mustela_putorius_furo
ENSEASG00005019997	VARS2	97	87.082	ENSMLUG00000002356	VARS2	97	87.082	Myotis_lucifugus
ENSEASG00005019997	VARS2	99	78.328	ENSNGAG00000020607	Vars2	100	78.194	Nannospalax_galili
ENSEASG00005019997	VARS2	66	51.039	ENSNBRG00000001624	vars2	60	53.039	Neolamprologus_brichardi
ENSEASG00005019997	VARS2	99	84.913	ENSNLEG00000005625	VARS2	99	84.913	Nomascus_leucogenys
ENSEASG00005019997	VARS2	75	82.266	ENSMEUG00000014475	VARS2	90	74.118	Notamacropus_eugenii
ENSEASG00005019997	VARS2	92	81.858	ENSOPRG00000000682	VARS2	90	81.858	Ochotona_princeps
ENSEASG00005019997	VARS2	97	83.051	ENSODEG00000017965	VARS2	99	83.051	Octodon_degus
ENSEASG00005019997	VARS2	95	40.989	ENSONIG00000004734	vars2	98	38.387	Oreochromis_niloticus
ENSEASG00005019997	VARS2	75	88.235	ENSOANG00000000398	-	98	88.235	Ornithorhynchus_anatinus
ENSEASG00005019997	VARS2	98	79.926	ENSOCUG00000021496	VARS2	65	80.111	Oryctolagus_cuniculus
ENSEASG00005019997	VARS2	94	55.399	ENSORLG00000010632	vars2	95	51.418	Oryzias_latipes
ENSEASG00005019997	VARS2	94	55.282	ENSORLG00020018584	vars2	97	51.084	Oryzias_latipes_hni
ENSEASG00005019997	VARS2	94	54.930	ENSORLG00015010408	vars2	96	50.760	Oryzias_latipes_hsok
ENSEASG00005019997	VARS2	94	55.529	ENSOMEG00000008360	vars2	97	51.313	Oryzias_melastigma
ENSEASG00005019997	VARS2	99	87.580	ENSOGAG00000006087	VARS2	99	87.580	Otolemur_garnettii
ENSEASG00005019997	VARS2	97	90.085	ENSOARG00000010844	VARS2	99	90.038	Ovis_aries
ENSEASG00005019997	VARS2	99	87.934	ENSPPAG00000041141	VARS2	99	89.444	Pan_paniscus
ENSEASG00005019997	VARS2	99	89.012	ENSPPRG00000006751	VARS2	99	89.012	Panthera_pardus
ENSEASG00005019997	VARS2	99	89.012	ENSPTIG00000017799	VARS2	98	90.251	Panthera_tigris_altaica
ENSEASG00005019997	VARS2	99	87.934	ENSPTRG00000034497	VARS2	99	89.444	Pan_troglodytes
ENSEASG00005019997	VARS2	99	89.338	ENSPANG00000018481	VARS2	100	90.407	Papio_anubis
ENSEASG00005019997	VARS2	96	56.359	ENSPKIG00000011372	vars2	99	53.477	Paramormyrops_kingsleyae
ENSEASG00005019997	VARS2	67	65.452	ENSPSIG00000006206	VARS2	92	66.358	Pelodiscus_sinensis
ENSEASG00005019997	VARS2	97	56.146	ENSPMGG00000000465	vars2	98	52.426	Periophthalmus_magnuspinnatus
ENSEASG00005019997	VARS2	97	84.151	ENSPEMG00000014691	Vars2	99	84.151	Peromyscus_maniculatus_bairdii
ENSEASG00005019997	VARS2	97	77.557	ENSPCIG00000015040	VARS2	99	77.557	Phascolarctos_cinereus
ENSEASG00005019997	VARS2	94	55.124	ENSPFOG00000017616	vars2	95	51.265	Poecilia_formosa
ENSEASG00005019997	VARS2	94	54.812	ENSPLAG00000019778	vars2	99	49.677	Poecilia_latipinna
ENSEASG00005019997	VARS2	94	54.930	ENSPMEG00000011123	vars2	95	51.018	Poecilia_mexicana
ENSEASG00005019997	VARS2	94	47.836	ENSPREG00000014998	vars2	93	46.123	Poecilia_reticulata
ENSEASG00005019997	VARS2	97	89.632	ENSPPYG00000016424	VARS2	99	89.632	Pongo_abelii
ENSEASG00005019997	VARS2	79	91.892	ENSPCAG00000006946	VARS2	84	85.030	Procavia_capensis
ENSEASG00005019997	VARS2	99	87.982	ENSPCOG00000014839	VARS2	99	87.982	Propithecus_coquereli
ENSEASG00005019997	VARS2	97	89.454	ENSPVAG00000004197	VARS2	99	89.454	Pteropus_vampyrus
ENSEASG00005019997	VARS2	94	52.848	ENSPNYG00000010314	vars2	97	61.022	Pundamilia_nyererei
ENSEASG00005019997	VARS2	95	57.753	ENSPNAG00000026793	vars2	95	54.059	Pygocentrus_nattereri
ENSEASG00005019997	VARS2	97	83.789	ENSRNOG00000000833	Vars2	99	83.789	Rattus_norvegicus
ENSEASG00005019997	VARS2	97	89.538	ENSRBIG00000032725	VARS2	99	89.538	Rhinopithecus_bieti
ENSEASG00005019997	VARS2	97	89.727	ENSRROG00000043847	VARS2	99	89.727	Rhinopithecus_roxellana
ENSEASG00005019997	VARS2	99	85.895	ENSSBOG00000033240	VARS2	99	85.895	Saimiri_boliviensis_boliviensis
ENSEASG00005019997	VARS2	97	75.568	ENSSHAG00000009307	VARS2	100	75.568	Sarcophilus_harrisii
ENSEASG00005019997	VARS2	95	57.075	ENSSFOG00015016187	vars2	98	52.582	Scleropages_formosus
ENSEASG00005019997	VARS2	83	70.051	ENSSMAG00000020842	vars2	98	51.573	Scophthalmus_maximus
ENSEASG00005019997	VARS2	95	55.451	ENSSDUG00000011598	vars2	97	51.183	Seriola_dumerili
ENSEASG00005019997	VARS2	94	56.153	ENSSLDG00000015492	vars2	95	50.812	Seriola_lalandi_dorsalis
ENSEASG00005019997	VARS2	57	90.511	ENSSARG00000003786	-	69	90.511	Sorex_araneus
ENSEASG00005019997	VARS2	94	63.711	ENSSPUG00000014700	VARS2	94	60.795	Sphenodon_punctatus
ENSEASG00005019997	VARS2	95	52.443	ENSSPAG00000004654	vars2	97	47.740	Stegastes_partitus
ENSEASG00005019997	VARS2	97	91.046	ENSSSCG00000001384	VARS2	99	91.111	Sus_scrofa
ENSEASG00005019997	VARS2	98	54.754	ENSTRUG00000005264	vars2	99	49.670	Takifugu_rubripes
ENSEASG00005019997	VARS2	95	55.437	ENSTNIG00000005916	vars2	99	51.529	Tetraodon_nigroviridis
ENSEASG00005019997	VARS2	53	95.522	ENSTBEG00000007976	-	53	95.522	Tupaia_belangeri
ENSEASG00005019997	VARS2	90	92.574	ENSTTRG00000012243	VARS2	88	92.574	Tursiops_truncatus
ENSEASG00005019997	VARS2	97	88.396	ENSUAMG00000026124	VARS2	99	89.554	Ursus_americanus
ENSEASG00005019997	VARS2	97	89.330	ENSUMAG00000019894	VARS2	99	89.330	Ursus_maritimus
ENSEASG00005019997	VARS2	99	86.158	ENSVVUG00000010754	VARS2	95	87.805	Vulpes_vulpes
ENSEASG00005019997	VARS2	94	54.137	ENSXETG00000003036	vars2	99	54.102	Xenopus_tropicalis
ENSEASG00005019997	VARS2	94	55.304	ENSXCOG00000003455	vars2	96	51.816	Xiphophorus_couchianus
ENSEASG00005019997	VARS2	94	54.631	ENSXMAG00000013523	vars2	98	49.120	Xiphophorus_maculatus