EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005020193 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 6104 bases
Position: chrPSZQ01003339.1:1775274-1781377
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005029708	RRM_1	PF00076.22	6.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005032289	SLIRP-201	336	-	ENSEASP00005029708	111 (aa)	-	UPI00071A84A2

Gene Model

Click here to download ENSEASG00005020193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005020193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005020193	SLIRP	60	31.343	ENSEASG00005023455	-	61	31.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005020193	SLIRP	86	73.684	ENSG00000119705	SLIRP	96	80.682	Homo_sapiens
ENSEASG00005020193	SLIRP	67	60.811	ENSAPOG00000001298	slirp	74	60.811	Acanthochromis_polyacanthus
ENSEASG00005020193	SLIRP	82	86.813	ENSAMEG00000003975	SLIRP	100	86.813	Ailuropoda_melanoleuca
ENSEASG00005020193	SLIRP	67	59.459	ENSACIG00000023083	slirp	73	59.459	Amphilophus_citrinellus
ENSEASG00005020193	SLIRP	77	58.140	ENSAOCG00000006342	slirp	86	58.140	Amphiprion_ocellaris
ENSEASG00005020193	SLIRP	77	58.140	ENSAPEG00000015917	slirp	86	58.140	Amphiprion_percula
ENSEASG00005020193	SLIRP	77	58.140	ENSAPEG00000015719	-	87	58.140	Amphiprion_percula
ENSEASG00005020193	SLIRP	80	49.438	ENSATEG00000013525	slirp	89	49.438	Anabas_testudineus
ENSEASG00005020193	SLIRP	78	56.818	ENSAMXG00000018693	slirp	88	56.818	Astyanax_mexicanus
ENSEASG00005020193	SLIRP	100	80.180	ENSCJAG00000016946	SLIRP	100	80.180	Callithrix_jacchus
ENSEASG00005020193	SLIRP	100	81.982	ENSCAFG00020015876	-	100	81.982	Canis_lupus_dingo
ENSEASG00005020193	SLIRP	100	81.081	ENSCCAG00000030130	SLIRP	100	81.081	Cebus_capucinus
ENSEASG00005020193	SLIRP	100	75.676	ENSCATG00000036327	SLIRP	95	81.818	Cercocebus_atys
ENSEASG00005020193	SLIRP	90	77.000	ENSCSAG00000011736	SLIRP	100	78.378	Chlorocebus_sabaeus
ENSEASG00005020193	SLIRP	63	54.286	ENSCPBG00000026327	SLIRP	71	54.286	Chrysemys_picta_bellii
ENSEASG00005020193	SLIRP	67	82.432	ENSCANG00000032892	SLIRP	90	81.818	Colobus_angolensis_palliatus
ENSEASG00005020193	SLIRP	100	69.369	ENSCGRG00001024068	Slirp	100	69.369	Cricetulus_griseus_chok1gshd
ENSEASG00005020193	SLIRP	100	69.369	ENSCGRG00000017440	Slirp	100	69.369	Cricetulus_griseus_crigri
ENSEASG00005020193	SLIRP	83	55.435	ENSCSEG00000015766	slirp	84	55.435	Cynoglossus_semilaevis
ENSEASG00005020193	SLIRP	62	56.522	ENSCVAG00000012504	slirp	68	56.522	Cyprinodon_variegatus
ENSEASG00005020193	SLIRP	68	57.333	ENSDARG00000097753	slirp	72	58.108	Danio_rerio
ENSEASG00005020193	SLIRP	80	73.034	ENSDNOG00000007721	SLIRP	98	69.725	Dasypus_novemcinctus
ENSEASG00005020193	SLIRP	98	82.569	ENSDORG00000012379	Slirp	98	82.569	Dipodomys_ordii
ENSEASG00005020193	SLIRP	90	73.000	ENSETEG00000010345	SLIRP	100	72.973	Echinops_telfairi
ENSEASG00005020193	SLIRP	92	64.706	ENSEEUG00000007257	SLIRP	100	64.706	Erinaceus_europaeus
ENSEASG00005020193	SLIRP	77	55.814	ENSELUG00000016800	slirp	84	55.814	Esox_lucius
ENSEASG00005020193	SLIRP	79	92.045	ENSFCAG00000036326	SLIRP	90	92.045	Felis_catus
ENSEASG00005020193	SLIRP	64	53.521	ENSFALG00000012583	SLIRP	86	51.613	Ficedula_albicollis
ENSEASG00005020193	SLIRP	97	76.106	ENSFDAG00000008347	SLIRP	100	76.106	Fukomys_damarensis
ENSEASG00005020193	SLIRP	59	56.923	ENSFHEG00000004709	slirp	71	56.923	Fundulus_heteroclitus
ENSEASG00005020193	SLIRP	67	56.757	ENSGMOG00000016948	slirp	71	56.757	Gadus_morhua
ENSEASG00005020193	SLIRP	67	54.054	ENSGALG00000031238	SLIRP	74	54.795	Gallus_gallus
ENSEASG00005020193	SLIRP	68	60.000	ENSGAFG00000010998	slirp	75	60.000	Gambusia_affinis
ENSEASG00005020193	SLIRP	65	56.944	ENSGACG00000020137	slirp	84	56.944	Gasterosteus_aculeatus
ENSEASG00005020193	SLIRP	81	54.444	ENSGAGG00000009953	SLIRP	62	54.444	Gopherus_agassizii
ENSEASG00005020193	SLIRP	86	73.684	ENSGGOG00000011059	-	95	80.682	Gorilla_gorilla
ENSEASG00005020193	SLIRP	100	72.973	ENSHGLG00000018491	SLIRP	100	72.973	Heterocephalus_glaber_female
ENSEASG00005020193	SLIRP	100	72.973	ENSHGLG00100014153	SLIRP	100	72.973	Heterocephalus_glaber_male
ENSEASG00005020193	SLIRP	81	53.846	ENSHCOG00000006795	slirp	90	53.846	Hippocampus_comes
ENSEASG00005020193	SLIRP	67	59.459	ENSIPUG00000010214	SLIRP	74	59.459	Ictalurus_punctatus
ENSEASG00005020193	SLIRP	90	84.000	ENSSTOG00000034316	SLIRP	100	84.685	Ictidomys_tridecemlineatus
ENSEASG00005020193	SLIRP	79	44.318	ENSKMAG00000002038	slirp	85	44.318	Kryptolebias_marmoratus
ENSEASG00005020193	SLIRP	80	50.562	ENSLBEG00000007564	slirp	89	50.562	Labrus_bergylta
ENSEASG00005020193	SLIRP	82	52.747	ENSLACG00000013434	SLIRP	87	52.747	Latimeria_chalumnae
ENSEASG00005020193	SLIRP	90	76.000	ENSMFAG00000042960	SLIRP	95	81.818	Macaca_fascicularis
ENSEASG00005020193	SLIRP	90	76.000	ENSMMUG00000029256	SLIRP	95	82.955	Macaca_mulatta
ENSEASG00005020193	SLIRP	90	76.000	ENSMNEG00000028921	SLIRP	95	81.818	Macaca_nemestrina
ENSEASG00005020193	SLIRP	79	81.818	ENSMLEG00000043644	SLIRP	90	81.818	Mandrillus_leucophaeus
ENSEASG00005020193	SLIRP	80	55.056	ENSMZEG00005004617	slirp	90	55.056	Maylandia_zebra
ENSEASG00005020193	SLIRP	100	73.874	ENSMAUG00000003857	Slirp	100	73.874	Mesocricetus_auratus
ENSEASG00005020193	SLIRP	100	73.874	ENSMICG00000012080	SLIRP	100	73.874	Microcebus_murinus
ENSEASG00005020193	SLIRP	100	77.477	ENSMOCG00000016019	Slirp	99	77.477	Microtus_ochrogaster
ENSEASG00005020193	SLIRP	78	54.023	ENSMMOG00000018268	slirp	87	54.023	Mola_mola
ENSEASG00005020193	SLIRP	63	65.714	ENSMODG00000005207	-	99	65.714	Monodelphis_domestica
ENSEASG00005020193	SLIRP	80	49.438	ENSMALG00000012581	slirp	89	49.438	Monopterus_albus
ENSEASG00005020193	SLIRP	97	80.556	MGP_CAROLIEiJ_G0017995	Slirp	100	80.556	Mus_caroli
ENSEASG00005020193	SLIRP	100	80.180	ENSMUSG00000021040	Slirp	99	80.180	Mus_musculus
ENSEASG00005020193	SLIRP	100	80.180	MGP_SPRETEiJ_G0018840	Slirp	99	80.180	Mus_spretus
ENSEASG00005020193	SLIRP	86	85.263	ENSMLUG00000024998	-	100	82.883	Myotis_lucifugus
ENSEASG00005020193	SLIRP	90	84.000	ENSMLUG00000029544	-	100	82.883	Myotis_lucifugus
ENSEASG00005020193	SLIRP	97	76.852	ENSNGAG00000016363	Slirp	100	76.852	Nannospalax_galili
ENSEASG00005020193	SLIRP	93	68.932	ENSNLEG00000027238	-	93	74.074	Nomascus_leucogenys
ENSEASG00005020193	SLIRP	100	72.072	ENSNLEG00000032459	-	95	77.273	Nomascus_leucogenys
ENSEASG00005020193	SLIRP	100	78.378	ENSODEG00000012580	SLIRP	99	78.378	Octodon_degus
ENSEASG00005020193	SLIRP	78	57.471	ENSONIG00000011692	slirp	86	57.471	Oreochromis_niloticus
ENSEASG00005020193	SLIRP	89	57.798	ENSOANG00000022366	SLIRP	98	57.798	Ornithorhynchus_anatinus
ENSEASG00005020193	SLIRP	80	55.056	ENSORLG00000010761	slirp	69	55.056	Oryzias_latipes
ENSEASG00005020193	SLIRP	80	56.180	ENSORLG00020022188	slirp	89	56.180	Oryzias_latipes_hni
ENSEASG00005020193	SLIRP	99	49.091	ENSORLG00015020171	slirp	100	49.091	Oryzias_latipes_hsok
ENSEASG00005020193	SLIRP	80	53.933	ENSOMEG00000019321	slirp	89	53.933	Oryzias_melastigma
ENSEASG00005020193	SLIRP	87	71.134	ENSPPAG00000040710	-	95	80.682	Pan_paniscus
ENSEASG00005020193	SLIRP	79	92.045	ENSPPRG00000014350	SLIRP	90	92.045	Panthera_pardus
ENSEASG00005020193	SLIRP	79	92.045	ENSPTIG00000014196	SLIRP	90	92.045	Panthera_tigris_altaica
ENSEASG00005020193	SLIRP	86	73.684	ENSPTRG00000030691	SLIRP	95	80.682	Pan_troglodytes
ENSEASG00005020193	SLIRP	100	76.577	ENSPANG00000026323	SLIRP	95	81.818	Papio_anubis
ENSEASG00005020193	SLIRP	65	50.667	ENSPKIG00000008831	slirp	74	50.667	Paramormyrops_kingsleyae
ENSEASG00005020193	SLIRP	61	61.765	ENSPMGG00000010541	slirp	78	61.765	Periophthalmus_magnuspinnatus
ENSEASG00005020193	SLIRP	90	73.267	ENSPEMG00000013234	Slirp	98	72.321	Peromyscus_maniculatus_bairdii
ENSEASG00005020193	SLIRP	61	54.412	ENSPMAG00000009355	slirp	76	54.412	Petromyzon_marinus
ENSEASG00005020193	SLIRP	72	60.976	ENSPCIG00000026842	-	88	60.976	Phascolarctos_cinereus
ENSEASG00005020193	SLIRP	67	58.108	ENSPFOG00000006758	slirp	74	58.108	Poecilia_formosa
ENSEASG00005020193	SLIRP	81	52.222	ENSPLAG00000011140	slirp	88	52.222	Poecilia_latipinna
ENSEASG00005020193	SLIRP	67	58.108	ENSPMEG00000019535	slirp	74	58.108	Poecilia_mexicana
ENSEASG00005020193	SLIRP	67	58.108	ENSPREG00000011673	slirp	74	58.108	Poecilia_reticulata
ENSEASG00005020193	SLIRP	90	71.000	ENSPPYG00000006030	SLIRP	100	72.072	Pongo_abelii
ENSEASG00005020193	SLIRP	100	73.874	ENSPCOG00000015159	SLIRP	100	73.874	Propithecus_coquereli
ENSEASG00005020193	SLIRP	80	61.798	ENSPNAG00000008633	slirp	89	61.798	Pygocentrus_nattereri
ENSEASG00005020193	SLIRP	69	77.922	ENSRBIG00000032998	-	81	79.545	Rhinopithecus_bieti
ENSEASG00005020193	SLIRP	90	76.000	ENSRBIG00000032222	-	100	77.477	Rhinopithecus_bieti
ENSEASG00005020193	SLIRP	88	71.429	ENSRBIG00000035817	-	100	73.394	Rhinopithecus_bieti
ENSEASG00005020193	SLIRP	68	80.000	ENSRBIG00000031396	-	86	81.395	Rhinopithecus_bieti
ENSEASG00005020193	SLIRP	68	81.333	ENSRROG00000035604	-	86	82.558	Rhinopithecus_roxellana
ENSEASG00005020193	SLIRP	69	79.221	ENSRROG00000017133	-	92	80.682	Rhinopithecus_roxellana
ENSEASG00005020193	SLIRP	83	72.826	ENSRROG00000041312	-	99	74.757	Rhinopithecus_roxellana
ENSEASG00005020193	SLIRP	90	75.000	ENSRROG00000036656	-	100	76.577	Rhinopithecus_roxellana
ENSEASG00005020193	SLIRP	79	78.409	ENSSBOG00000020014	SLIRP	95	78.409	Saimiri_boliviensis_boliviensis
ENSEASG00005020193	SLIRP	69	61.039	ENSSFOG00015011165	slirp	78	61.039	Scleropages_formosus
ENSEASG00005020193	SLIRP	78	43.678	ENSSMAG00000012930	slirp	85	43.678	Scophthalmus_maximus
ENSEASG00005020193	SLIRP	80	55.056	ENSSDUG00000021883	slirp	59	55.056	Seriola_dumerili
ENSEASG00005020193	SLIRP	80	55.056	ENSSLDG00000023136	slirp	81	55.056	Seriola_lalandi_dorsalis
ENSEASG00005020193	SLIRP	67	51.351	ENSSPUG00000009346	SLIRP	76	51.351	Sphenodon_punctatus
ENSEASG00005020193	SLIRP	67	55.405	ENSSPAG00000013477	slirp	74	55.405	Stegastes_partitus
ENSEASG00005020193	SLIRP	100	85.586	ENSSSCG00000028167	SLIRP	100	85.586	Sus_scrofa
ENSEASG00005020193	SLIRP	64	56.338	ENSTGUG00000012337	SLIRP	86	53.763	Taeniopygia_guttata
ENSEASG00005020193	SLIRP	80	48.889	ENSTRUG00000020127	slirp	88	48.889	Takifugu_rubripes
ENSEASG00005020193	SLIRP	100	90.090	ENSUAMG00000022445	SLIRP	100	90.090	Ursus_americanus
ENSEASG00005020193	SLIRP	100	90.991	ENSUMAG00000007166	SLIRP	100	90.991	Ursus_maritimus
ENSEASG00005020193	SLIRP	100	80.180	ENSVPAG00000001781	SLIRP	100	80.180	Vicugna_pacos
ENSEASG00005020193	SLIRP	86	85.417	ENSVVUG00000004436	SLIRP	100	84.685	Vulpes_vulpes
ENSEASG00005020193	SLIRP	63	58.571	ENSXETG00000030343	SLIRP	79	58.571	Xenopus_tropicalis
ENSEASG00005020193	SLIRP	77	52.326	ENSXCOG00000009422	slirp	85	52.326	Xiphophorus_couchianus
ENSEASG00005020193	SLIRP	81	53.333	ENSXMAG00000015655	slirp	88	53.333	Xiphophorus_maculatus