EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005020897 (Gene tree)
Gene ID: -
Gene Symbol: RC3H2
Alias: FLJ20301|FLJ20713|MNAB|RNF164
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 38245 bases
Position: chrPSZQ01008595.1:4873291-4911535
Accession: 21461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005030807	zf-CCCH	PF00642.24	5e-07	1	1
ENSEASP00005030798	zf-CCCH	PF00642.24	1.6e-06	1	1
ENSEASP00005030790	zf-CCCH	PF00642.24	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005033500	RC3H2-204	1404	-	ENSEASP00005030812	467 (aa)	-	-
ENSEAST00005033495	RC3H2-203	1383	-	ENSEASP00005030807	460 (aa)	-	-
ENSEAST00005033485	RC3H2-202	3426	-	ENSEASP00005030798	1141 (aa)	-	-
ENSEAST00005033477	RC3H2-201	3516	-	ENSEASP00005030790	1171 (aa)	-	-

Gene Model

Click here to download ENSEASG00005020897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005020897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005020897	RC3H2	94	78.808	ENSEASG00005017000	RC3H1	92	53.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005020897	RC3H2	100	95.130	ENSG00000056586	RC3H2	100	95.130	Homo_sapiens
ENSEASG00005020897	RC3H2	99	78.750	ENSAPOG00000002117	rc3h2	93	56.706	Acanthochromis_polyacanthus
ENSEASG00005020897	RC3H2	100	96.138	ENSAMEG00000006498	RC3H2	100	96.138	Ailuropoda_melanoleuca
ENSEASG00005020897	RC3H2	94	81.195	ENSACIG00000005206	rc3h2	97	81.223	Amphilophus_citrinellus
ENSEASG00005020897	RC3H2	92	82.993	ENSAOCG00000019780	-	93	83.673	Amphiprion_ocellaris
ENSEASG00005020897	RC3H2	92	83.032	ENSAOCG00000007724	rc3h2	96	83.710	Amphiprion_ocellaris
ENSEASG00005020897	RC3H2	99	78.750	ENSAPEG00000007757	rc3h2	93	56.976	Amphiprion_percula
ENSEASG00005020897	RC3H2	94	81.960	ENSATEG00000019414	rc3h2	91	55.767	Anabas_testudineus
ENSEASG00005020897	RC3H2	100	88.181	ENSAPLG00000013920	RC3H2	100	88.181	Anas_platyrhynchos
ENSEASG00005020897	RC3H2	100	95.214	ENSANAG00000030862	RC3H2	100	95.214	Aotus_nancymaae
ENSEASG00005020897	RC3H2	99	77.597	ENSACLG00000023136	rc3h2	92	55.425	Astatotilapia_calliptera
ENSEASG00005020897	RC3H2	94	81.333	ENSAMXG00000006778	rc3h2	93	54.706	Astyanax_mexicanus
ENSEASG00005020897	RC3H2	100	95.542	ENSBTAG00000023867	RC3H2	100	95.542	Bos_taurus
ENSEASG00005020897	RC3H2	100	95.214	ENSCJAG00000020050	RC3H2	100	95.214	Callithrix_jacchus
ENSEASG00005020897	RC3H2	92	92.081	ENSCAFG00000032522	-	100	93.213	Canis_familiaris
ENSEASG00005020897	RC3H2	100	95.795	ENSCAFG00020015288	RC3H2	100	95.795	Canis_lupus_dingo
ENSEASG00005020897	RC3H2	100	95.458	ENSCHIG00000019319	RC3H2	100	95.458	Capra_hircus
ENSEASG00005020897	RC3H2	82	80.062	ENSCAPG00000017086	RC3H2	91	79.773	Cavia_aperea
ENSEASG00005020897	RC3H2	100	94.533	ENSCPOG00000008511	RC3H2	100	94.533	Cavia_porcellus
ENSEASG00005020897	RC3H2	100	95.122	ENSCCAG00000001404	RC3H2	100	95.122	Cebus_capucinus
ENSEASG00005020897	RC3H2	100	95.382	ENSCATG00000036655	RC3H2	100	95.382	Cercocebus_atys
ENSEASG00005020897	RC3H2	100	94.701	ENSCLAG00000013261	RC3H2	100	94.701	Chinchilla_lanigera
ENSEASG00005020897	RC3H2	91	98.117	ENSCSAG00000013416	RC3H2	100	98.117	Chlorocebus_sabaeus
ENSEASG00005020897	RC3H2	100	86.924	ENSCPBG00000009811	RC3H2	100	86.924	Chrysemys_picta_bellii
ENSEASG00005020897	RC3H2	100	95.466	ENSCANG00000043140	RC3H2	100	95.466	Colobus_angolensis_palliatus
ENSEASG00005020897	RC3H2	100	92.262	ENSCGRG00001010006	Rc3h2	100	91.674	Cricetulus_griseus_chok1gshd
ENSEASG00005020897	RC3H2	95	91.611	ENSCGRG00000009255	Rc3h2	100	92.063	Cricetulus_griseus_crigri
ENSEASG00005020897	RC3H2	94	81.416	ENSCSEG00000017460	rc3h2	96	55.566	Cynoglossus_semilaevis
ENSEASG00005020897	RC3H2	94	82.628	ENSCVAG00000012202	rc3h2	91	55.855	Cyprinodon_variegatus
ENSEASG00005020897	RC3H2	94	80.752	ENSDARG00000063050	rc3h2	96	55.156	Danio_rerio
ENSEASG00005020897	RC3H2	100	94.365	ENSDNOG00000014557	RC3H2	100	94.365	Dasypus_novemcinctus
ENSEASG00005020897	RC3H2	100	94.113	ENSDORG00000006398	Rc3h2	100	94.113	Dipodomys_ordii
ENSEASG00005020897	RC3H2	100	96.804	ENSECAG00000022176	RC3H2	100	96.804	Equus_caballus
ENSEASG00005020897	RC3H2	94	83.850	ENSELUG00000006105	rc3h2	93	57.276	Esox_lucius
ENSEASG00005020897	RC3H2	100	96.131	ENSFCAG00000007375	RC3H2	100	96.131	Felis_catus
ENSEASG00005020897	RC3H2	100	88.265	ENSFALG00000002011	RC3H2	100	88.265	Ficedula_albicollis
ENSEASG00005020897	RC3H2	100	95.038	ENSFDAG00000012477	RC3H2	100	95.038	Fukomys_damarensis
ENSEASG00005020897	RC3H2	94	83.073	ENSFHEG00000012272	rc3h2	93	55.678	Fundulus_heteroclitus
ENSEASG00005020897	RC3H2	61	82.143	ENSGMOG00000016709	-	100	52.086	Gadus_morhua
ENSEASG00005020897	RC3H2	100	88.181	ENSGALG00000001253	RC3H2	100	88.181	Gallus_gallus
ENSEASG00005020897	RC3H2	94	82.301	ENSGAFG00000007679	rc3h2	96	55.041	Gambusia_affinis
ENSEASG00005020897	RC3H2	92	82.805	ENSGACG00000017369	rc3h2	100	83.484	Gasterosteus_aculeatus
ENSEASG00005020897	RC3H2	100	87.008	ENSGAGG00000018295	RC3H2	100	87.008	Gopherus_agassizii
ENSEASG00005020897	RC3H2	100	95.298	ENSGGOG00000017062	RC3H2	100	95.298	Gorilla_gorilla
ENSEASG00005020897	RC3H2	99	79.289	ENSHBUG00000003976	rc3h2	92	56.084	Haplochromis_burtoni
ENSEASG00005020897	RC3H2	100	92.050	ENSHGLG00000012014	-	100	92.050	Heterocephalus_glaber_female
ENSEASG00005020897	RC3H2	100	94.790	ENSHGLG00100018015	RC3H2	100	94.790	Heterocephalus_glaber_male
ENSEASG00005020897	RC3H2	94	79.733	ENSHCOG00000003006	rc3h2	98	51.566	Hippocampus_comes
ENSEASG00005020897	RC3H2	94	79.425	ENSIPUG00000021433	rc3h2	96	53.131	Ictalurus_punctatus
ENSEASG00005020897	RC3H2	100	95.290	ENSSTOG00000010655	RC3H2	100	95.290	Ictidomys_tridecemlineatus
ENSEASG00005020897	RC3H2	100	94.207	ENSJJAG00000022376	Rc3h2	100	94.207	Jaculus_jaculus
ENSEASG00005020897	RC3H2	94	82.080	ENSKMAG00000010936	rc3h2	91	56.215	Kryptolebias_marmoratus
ENSEASG00005020897	RC3H2	95	87.417	ENSLOCG00000002894	rc3h2	94	61.076	Lepisosteus_oculatus
ENSEASG00005020897	RC3H2	100	94.113	ENSLAFG00000003521	RC3H2	100	94.113	Loxodonta_africana
ENSEASG00005020897	RC3H2	100	95.382	ENSMFAG00000035621	RC3H2	100	95.764	Macaca_fascicularis
ENSEASG00005020897	RC3H2	100	95.382	ENSMMUG00000021134	RC3H2	100	95.382	Macaca_mulatta
ENSEASG00005020897	RC3H2	100	95.382	ENSMNEG00000031599	RC3H2	100	95.382	Macaca_nemestrina
ENSEASG00005020897	RC3H2	100	92.259	ENSMLEG00000033809	RC3H2	99	94.216	Mandrillus_leucophaeus
ENSEASG00005020897	RC3H2	92	82.993	ENSMAMG00000009119	rc3h2	93	83.673	Mastacembelus_armatus
ENSEASG00005020897	RC3H2	99	79.289	ENSMZEG00005017019	rc3h2	92	56.022	Maylandia_zebra
ENSEASG00005020897	RC3H2	100	88.117	ENSMGAG00000007984	RC3H2	100	88.117	Meleagris_gallopavo
ENSEASG00005020897	RC3H2	83	91.644	ENSMAUG00000003117	Rc3h2	95	90.263	Mesocricetus_auratus
ENSEASG00005020897	RC3H2	100	95.122	ENSMICG00000003227	RC3H2	100	95.122	Microcebus_murinus
ENSEASG00005020897	RC3H2	100	92.935	ENSMOCG00000009592	Rc3h2	100	92.935	Microtus_ochrogaster
ENSEASG00005020897	RC3H2	95	81.400	ENSMMOG00000021305	rc3h2	96	83.742	Mola_mola
ENSEASG00005020897	RC3H2	95	91.611	ENSMODG00000019725	RC3H2	79	91.266	Monodelphis_domestica
ENSEASG00005020897	RC3H2	92	81.591	ENSMALG00000017885	rc3h2	92	82.045	Monopterus_albus
ENSEASG00005020897	RC3H2	100	91.423	MGP_CAROLIEiJ_G0023516	Rc3h2	100	91.423	Mus_caroli
ENSEASG00005020897	RC3H2	100	92.683	ENSMUSG00000075376	Rc3h2	100	92.683	Mus_musculus
ENSEASG00005020897	RC3H2	100	93.103	MGP_PahariEiJ_G0024969	Rc3h2	100	93.103	Mus_pahari
ENSEASG00005020897	RC3H2	100	92.935	MGP_SPRETEiJ_G0024436	Rc3h2	100	92.935	Mus_spretus
ENSEASG00005020897	RC3H2	100	95.542	ENSMPUG00000014141	RC3H2	100	95.542	Mustela_putorius_furo
ENSEASG00005020897	RC3H2	100	94.622	ENSMLUG00000013992	RC3H2	100	94.622	Myotis_lucifugus
ENSEASG00005020897	RC3H2	100	88.518	ENSNGAG00000009763	-	100	88.518	Nannospalax_galili
ENSEASG00005020897	RC3H2	99	79.289	ENSNBRG00000009276	rc3h2	92	55.993	Neolamprologus_brichardi
ENSEASG00005020897	RC3H2	100	94.207	ENSNLEG00000017204	RC3H2	100	94.207	Nomascus_leucogenys
ENSEASG00005020897	RC3H2	62	95.833	ENSMEUG00000001299	-	64	89.928	Notamacropus_eugenii
ENSEASG00005020897	RC3H2	80	92.063	ENSOPRG00000000135	RC3H2	91	91.634	Ochotona_princeps
ENSEASG00005020897	RC3H2	100	91.841	ENSODEG00000005918	-	100	91.841	Octodon_degus
ENSEASG00005020897	RC3H2	99	79.289	ENSONIG00000003945	rc3h2	100	56.506	Oreochromis_niloticus
ENSEASG00005020897	RC3H2	95	91.611	ENSOANG00000008194	RC3H2	100	90.185	Ornithorhynchus_anatinus
ENSEASG00005020897	RC3H2	100	95.290	ENSOCUG00000008804	RC3H2	100	95.290	Oryctolagus_cuniculus
ENSEASG00005020897	RC3H2	94	82.851	ENSORLG00000010018	rc3h2	92	56.410	Oryzias_latipes
ENSEASG00005020897	RC3H2	94	82.851	ENSORLG00020013257	rc3h2	92	56.187	Oryzias_latipes_hni
ENSEASG00005020897	RC3H2	94	82.851	ENSORLG00015001525	rc3h2	92	56.462	Oryzias_latipes_hsok
ENSEASG00005020897	RC3H2	99	78.750	ENSOMEG00000023540	rc3h2	93	55.989	Oryzias_melastigma
ENSEASG00005020897	RC3H2	100	94.626	ENSOGAG00000010678	RC3H2	100	94.626	Otolemur_garnettii
ENSEASG00005020897	RC3H2	100	95.382	ENSOARG00000013965	RC3H2	100	95.382	Ovis_aries
ENSEASG00005020897	RC3H2	100	95.298	ENSPPAG00000036013	RC3H2	100	95.298	Pan_paniscus
ENSEASG00005020897	RC3H2	100	96.054	ENSPPRG00000008698	RC3H2	100	96.054	Panthera_pardus
ENSEASG00005020897	RC3H2	100	96.054	ENSPTIG00000014257	RC3H2	100	96.054	Panthera_tigris_altaica
ENSEASG00005020897	RC3H2	100	95.298	ENSPTRG00000021339	RC3H2	100	95.298	Pan_troglodytes
ENSEASG00005020897	RC3H2	100	93.619	ENSPANG00000025840	RC3H2	100	93.619	Papio_anubis
ENSEASG00005020897	RC3H2	95	84.106	ENSPKIG00000021910	rc3h2	90	60.623	Paramormyrops_kingsleyae
ENSEASG00005020897	RC3H2	100	87.259	ENSPSIG00000005393	RC3H2	100	87.259	Pelodiscus_sinensis
ENSEASG00005020897	RC3H2	97	79.614	ENSPMGG00000023963	rc3h2	99	79.614	Periophthalmus_magnuspinnatus
ENSEASG00005020897	RC3H2	100	92.935	ENSPEMG00000023441	Rc3h2	100	92.935	Peromyscus_maniculatus_bairdii
ENSEASG00005020897	RC3H2	100	90.704	ENSPCIG00000025559	RC3H2	100	90.704	Phascolarctos_cinereus
ENSEASG00005020897	RC3H2	94	82.889	ENSPFOG00000019699	rc3h2	100	56.767	Poecilia_formosa
ENSEASG00005020897	RC3H2	94	82.080	ENSPLAG00000005799	rc3h2	95	61.022	Poecilia_latipinna
ENSEASG00005020897	RC3H2	94	82.522	ENSPMEG00000014187	rc3h2	93	55.251	Poecilia_mexicana
ENSEASG00005020897	RC3H2	94	82.743	ENSPREG00000008979	rc3h2	92	54.886	Poecilia_reticulata
ENSEASG00005020897	RC3H2	86	90.862	ENSPCAG00000010154	RC3H2	86	90.862	Procavia_capensis
ENSEASG00005020897	RC3H2	99	77.597	ENSPNYG00000012063	rc3h2	92	55.425	Pundamilia_nyererei
ENSEASG00005020897	RC3H2	94	83.982	ENSPNAG00000017502	rc3h2	94	53.968	Pygocentrus_nattereri
ENSEASG00005020897	RC3H2	100	92.851	ENSRNOG00000009196	Rc3h2	100	92.851	Rattus_norvegicus
ENSEASG00005020897	RC3H2	100	92.259	ENSRBIG00000032579	RC3H2	100	95.111	Rhinopithecus_bieti
ENSEASG00005020897	RC3H2	100	95.458	ENSRROG00000043784	RC3H2	100	95.458	Rhinopithecus_roxellana
ENSEASG00005020897	RC3H2	100	95.046	ENSSBOG00000029100	RC3H2	100	95.046	Saimiri_boliviensis_boliviensis
ENSEASG00005020897	RC3H2	100	90.635	ENSSHAG00000007498	RC3H2	100	90.635	Sarcophilus_harrisii
ENSEASG00005020897	RC3H2	92	85.034	ENSSFOG00015000964	rc3h2	91	85.261	Scleropages_formosus
ENSEASG00005020897	RC3H2	99	77.917	ENSSMAG00000020048	rc3h2	93	56.278	Scophthalmus_maximus
ENSEASG00005020897	RC3H2	99	78.750	ENSSDUG00000016022	rc3h2	93	56.616	Seriola_dumerili
ENSEASG00005020897	RC3H2	99	78.750	ENSSLDG00000016070	rc3h2	93	56.498	Seriola_lalandi_dorsalis
ENSEASG00005020897	RC3H2	100	93.871	ENSSARG00000012329	RC3H2	100	93.871	Sorex_araneus
ENSEASG00005020897	RC3H2	100	85.368	ENSSPUG00000001457	RC3H2	100	85.368	Sphenodon_punctatus
ENSEASG00005020897	RC3H2	99	78.750	ENSSPAG00000005233	rc3h2	93	56.346	Stegastes_partitus
ENSEASG00005020897	RC3H2	100	95.966	ENSSSCG00000005575	RC3H2	100	95.966	Sus_scrofa
ENSEASG00005020897	RC3H2	100	88.349	ENSTGUG00000006889	-	100	88.349	Taeniopygia_guttata
ENSEASG00005020897	RC3H2	92	83.371	ENSTRUG00000003364	rc3h2	100	84.055	Takifugu_rubripes
ENSEASG00005020897	RC3H2	96	79.610	ENSTNIG00000004942	rc3h2	100	56.670	Tetraodon_nigroviridis
ENSEASG00005020897	RC3H2	95	90.728	ENSTBEG00000009622	RC3H2	86	100.000	Tupaia_belangeri
ENSEASG00005020897	RC3H2	94	97.587	ENSTTRG00000016954	RC3H2	94	97.587	Tursiops_truncatus
ENSEASG00005020897	RC3H2	100	96.299	ENSUAMG00000015355	RC3H2	100	96.299	Ursus_americanus
ENSEASG00005020897	RC3H2	100	96.299	ENSUMAG00000003161	RC3H2	100	96.299	Ursus_maritimus
ENSEASG00005020897	RC3H2	100	95.550	ENSVPAG00000005994	RC3H2	100	95.550	Vicugna_pacos
ENSEASG00005020897	RC3H2	100	95.627	ENSVVUG00000009519	RC3H2	100	95.627	Vulpes_vulpes
ENSEASG00005020897	RC3H2	94	83.296	ENSXCOG00000005002	rc3h2	99	81.128	Xiphophorus_couchianus
ENSEASG00005020897	RC3H2	94	83.296	ENSXMAG00000001724	rc3h2	91	55.556	Xiphophorus_maculatus