EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005021162 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 35189 bases
Position: chrPSZQ01003554.1:3956103-3991291
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005031168	DUF1604	PF07713.13	1.9e-35	1	1
ENSEASP00005031166	DUF1604	PF07713.13	2e-35	1	1
ENSEASP00005031165	DUF1604	PF07713.13	2e-35	1	1
ENSEASP00005031168	G-patch	PF01585.23	4e-07	1	1
ENSEASP00005031166	G-patch	PF01585.23	4.6e-07	1	1
ENSEASP00005031165	G-patch	PF01585.23	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005033885	GPATCH1-203	2568	-	ENSEASP00005031168	855 (aa)	-	-
ENSEAST00005033882	GPATCH1-201	2730	-	ENSEASP00005031165	909 (aa)	-	-
ENSEAST00005033883	GPATCH1-202	2706	-	ENSEASP00005031166	901 (aa)	-	-

Gene Model

Click here to download ENSEASG00005021162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005021162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005021162	GPATCH1	93	89.095	ENSG00000076650	GPATCH1	91	88.534	Homo_sapiens
ENSEASG00005021162	GPATCH1	93	91.180	ENSAMEG00000015575	GPATCH1	91	90.414	Ailuropoda_melanoleuca
ENSEASG00005021162	GPATCH1	87	69.613	ENSAOCG00000006668	gpatch1	77	69.613	Amphiprion_ocellaris
ENSEASG00005021162	GPATCH1	88	54.534	ENSAPEG00000000026	gpatch1	90	51.959	Amphiprion_percula
ENSEASG00005021162	GPATCH1	91	50.515	ENSATEG00000014494	gpatch1	93	49.286	Anabas_testudineus
ENSEASG00005021162	GPATCH1	94	62.235	ENSAPLG00000007584	GPATCH1	96	60.620	Anas_platyrhynchos
ENSEASG00005021162	GPATCH1	93	88.476	ENSANAG00000027002	GPATCH1	91	87.825	Aotus_nancymaae
ENSEASG00005021162	GPATCH1	88	54.719	ENSACLG00000024740	gpatch1	87	53.030	Astatotilapia_calliptera
ENSEASG00005021162	GPATCH1	92	52.040	ENSAMXG00000020177	gpatch1	97	53.019	Astyanax_mexicanus
ENSEASG00005021162	GPATCH1	93	90.311	ENSBTAG00000000721	GPATCH1	91	89.573	Bos_taurus
ENSEASG00005021162	GPATCH1	74	30.547	WBGene00011109	R07E5.1	68	31.108	Caenorhabditis_elegans
ENSEASG00005021162	GPATCH1	93	87.856	ENSCJAG00000000684	GPATCH1	91	87.234	Callithrix_jacchus
ENSEASG00005021162	GPATCH1	93	90.186	ENSCAFG00000007457	GPATCH1	76	89.349	Canis_familiaris
ENSEASG00005021162	GPATCH1	93	90.074	ENSCAFG00020019731	GPATCH1	91	89.349	Canis_lupus_dingo
ENSEASG00005021162	GPATCH1	100	86.424	ENSCHIG00000019626	GPATCH1	100	86.534	Capra_hircus
ENSEASG00005021162	GPATCH1	89	80.466	ENSCAPG00000008827	GPATCH1	90	80.073	Cavia_aperea
ENSEASG00005021162	GPATCH1	93	82.814	ENSCPOG00000024477	GPATCH1	91	82.214	Cavia_porcellus
ENSEASG00005021162	GPATCH1	93	87.361	ENSCCAG00000024676	GPATCH1	91	87.352	Cebus_capucinus
ENSEASG00005021162	GPATCH1	93	89.343	ENSCATG00000043637	GPATCH1	91	88.534	Cercocebus_atys
ENSEASG00005021162	GPATCH1	97	78.714	ENSCLAG00000003395	-	91	83.067	Chinchilla_lanigera
ENSEASG00005021162	GPATCH1	93	86.757	ENSCSAG00000004743	GPATCH1	91	86.068	Chlorocebus_sabaeus
ENSEASG00005021162	GPATCH1	85	79.810	ENSCHOG00000012865	GPATCH1	89	79.896	Choloepus_hoffmanni
ENSEASG00005021162	GPATCH1	84	69.146	ENSCPBG00000000666	GPATCH1	92	69.146	Chrysemys_picta_bellii
ENSEASG00005021162	GPATCH1	87	35.649	ENSCING00000012518	-	90	34.438	Ciona_intestinalis
ENSEASG00005021162	GPATCH1	83	84.643	ENSCANG00000012540	GPATCH1	89	83.386	Colobus_angolensis_palliatus
ENSEASG00005021162	GPATCH1	97	78.738	ENSCGRG00001016736	Gpatch1	90	81.265	Cricetulus_griseus_chok1gshd
ENSEASG00005021162	GPATCH1	90	70.347	ENSCGRG00000005069	Gpatch1	93	65.212	Cricetulus_griseus_crigri
ENSEASG00005021162	GPATCH1	80	51.214	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSEASG00005021162	GPATCH1	96	49.156	ENSDARG00000033418	gpatch1	94	49.367	Danio_rerio
ENSEASG00005021162	GPATCH1	93	86.957	ENSDNOG00000005291	GPATCH1	95	86.068	Dasypus_novemcinctus
ENSEASG00005021162	GPATCH1	93	80.552	ENSDORG00000012546	Gpatch1	94	79.833	Dipodomys_ordii
ENSEASG00005021162	GPATCH1	95	30.884	FBgn0036386	CG8833	67	33.714	Drosophila_melanogaster
ENSEASG00005021162	GPATCH1	99	73.131	ENSETEG00000003626	GPATCH1	100	75.621	Echinops_telfairi
ENSEASG00005021162	GPATCH1	97	37.053	ENSEBUG00000011286	gpatch1	91	38.276	Eptatretus_burgeri
ENSEASG00005021162	GPATCH1	93	98.507	ENSECAG00000022743	GPATCH1	88	98.223	Equus_caballus
ENSEASG00005021162	GPATCH1	83	78.922	ENSEEUG00000012925	GPATCH1	78	78.922	Erinaceus_europaeus
ENSEASG00005021162	GPATCH1	92	50.915	ENSELUG00000018195	gpatch1	90	51.425	Esox_lucius
ENSEASG00005021162	GPATCH1	100	86.891	ENSFCAG00000014917	GPATCH1	91	89.362	Felis_catus
ENSEASG00005021162	GPATCH1	95	63.389	ENSFALG00000007821	GPATCH1	91	61.986	Ficedula_albicollis
ENSEASG00005021162	GPATCH1	90	84.805	ENSFDAG00000003871	GPATCH1	91	83.847	Fukomys_damarensis
ENSEASG00005021162	GPATCH1	90	51.276	ENSGMOG00000003830	gpatch1	95	51.276	Gadus_morhua
ENSEASG00005021162	GPATCH1	96	62.799	ENSGALG00000004839	GPATCH1	94	62.734	Gallus_gallus
ENSEASG00005021162	GPATCH1	88	52.083	ENSGACG00000017544	gpatch1	93	50.295	Gasterosteus_aculeatus
ENSEASG00005021162	GPATCH1	92	65.284	ENSGAGG00000010067	GPATCH1	90	65.166	Gopherus_agassizii
ENSEASG00005021162	GPATCH1	91	88.116	ENSGGOG00000010862	GPATCH1	91	88.307	Gorilla_gorilla
ENSEASG00005021162	GPATCH1	88	55.058	ENSHBUG00000023462	gpatch1	90	52.055	Haplochromis_burtoni
ENSEASG00005021162	GPATCH1	93	85.607	ENSHGLG00000009334	GPATCH1	91	83.962	Heterocephalus_glaber_female
ENSEASG00005021162	GPATCH1	93	85.732	ENSHGLG00100018074	GPATCH1	91	84.080	Heterocephalus_glaber_male
ENSEASG00005021162	GPATCH1	96	50.710	ENSIPUG00000014977	gpatch1	90	52.608	Ictalurus_punctatus
ENSEASG00005021162	GPATCH1	93	86.228	ENSSTOG00000003720	GPATCH1	99	83.333	Ictidomys_tridecemlineatus
ENSEASG00005021162	GPATCH1	93	84.375	ENSJJAG00000023765	Gpatch1	91	83.274	Jaculus_jaculus
ENSEASG00005021162	GPATCH1	92	52.018	ENSKMAG00000017950	gpatch1	90	52.408	Kryptolebias_marmoratus
ENSEASG00005021162	GPATCH1	88	52.488	ENSLBEG00000026527	gpatch1	88	51.176	Labrus_bergylta
ENSEASG00005021162	GPATCH1	89	58.583	ENSLACG00000008130	GPATCH1	89	58.745	Latimeria_chalumnae
ENSEASG00005021162	GPATCH1	88	57.888	ENSLOCG00000001800	gpatch1	90	55.097	Lepisosteus_oculatus
ENSEASG00005021162	GPATCH1	99	85.075	ENSLAFG00000013589	GPATCH1	99	85.075	Loxodonta_africana
ENSEASG00005021162	GPATCH1	93	89.095	ENSMFAG00000034418	GPATCH1	96	88.042	Macaca_fascicularis
ENSEASG00005021162	GPATCH1	93	88.861	ENSMMUG00000011790	GPATCH1	91	88.076	Macaca_mulatta
ENSEASG00005021162	GPATCH1	93	88.724	ENSMNEG00000045084	GPATCH1	91	87.825	Macaca_nemestrina
ENSEASG00005021162	GPATCH1	93	76.580	ENSMLEG00000043840	GPATCH1	90	76.241	Mandrillus_leucophaeus
ENSEASG00005021162	GPATCH1	88	54.592	ENSMZEG00005001926	gpatch1	83	54.156	Maylandia_zebra
ENSEASG00005021162	GPATCH1	91	65.311	ENSMGAG00000005775	GPATCH1	91	63.498	Meleagris_gallopavo
ENSEASG00005021162	GPATCH1	100	77.451	ENSMICG00000004829	GPATCH1	94	78.438	Microcebus_murinus
ENSEASG00005021162	GPATCH1	93	83.706	ENSMOCG00000000174	Gpatch1	91	82.471	Microtus_ochrogaster
ENSEASG00005021162	GPATCH1	87	51.136	ENSMMOG00000002140	gpatch1	93	49.706	Mola_mola
ENSEASG00005021162	GPATCH1	93	73.728	ENSMODG00000012226	GPATCH1	90	73.697	Monodelphis_domestica
ENSEASG00005021162	GPATCH1	88	52.799	ENSMALG00000014386	gpatch1	90	50.576	Monopterus_albus
ENSEASG00005021162	GPATCH1	93	85.357	ENSMUSG00000063808	Gpatch1	100	93.878	Mus_musculus
ENSEASG00005021162	GPATCH1	100	79.229	MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	Mus_pahari
ENSEASG00005021162	GPATCH1	100	79.550	MGP_SPRETEiJ_G0030681	Gpatch1	100	94.898	Mus_spretus
ENSEASG00005021162	GPATCH1	93	89.814	ENSMPUG00000007658	GPATCH1	91	88.994	Mustela_putorius_furo
ENSEASG00005021162	GPATCH1	93	89.041	ENSMLUG00000012161	GPATCH1	91	88.033	Myotis_lucifugus
ENSEASG00005021162	GPATCH1	93	85.606	ENSNGAG00000012455	Gpatch1	91	84.450	Nannospalax_galili
ENSEASG00005021162	GPATCH1	93	88.724	ENSNLEG00000007659	GPATCH1	91	87.943	Nomascus_leucogenys
ENSEASG00005021162	GPATCH1	84	67.818	ENSMEUG00000015174	GPATCH1	77	67.818	Notamacropus_eugenii
ENSEASG00005021162	GPATCH1	100	79.654	ENSODEG00000007103	GPATCH1	91	81.818	Octodon_degus
ENSEASG00005021162	GPATCH1	88	55.642	ENSONIG00000003302	gpatch1	91	53.710	Oreochromis_niloticus
ENSEASG00005021162	GPATCH1	99	71.584	ENSOANG00000012732	GPATCH1	90	73.634	Ornithorhynchus_anatinus
ENSEASG00005021162	GPATCH1	93	87.905	ENSOCUG00000015905	GPATCH1	91	86.761	Oryctolagus_cuniculus
ENSEASG00005021162	GPATCH1	91	51.013	ENSORLG00000018706	gpatch1	88	51.124	Oryzias_latipes
ENSEASG00005021162	GPATCH1	91	49.536	ENSOMEG00000022688	gpatch1	90	50.935	Oryzias_melastigma
ENSEASG00005021162	GPATCH1	92	87.990	ENSOGAG00000004016	GPATCH1	100	87.990	Otolemur_garnettii
ENSEASG00005021162	GPATCH1	92	90.100	ENSOARG00000004365	GPATCH1	90	89.367	Ovis_aries
ENSEASG00005021162	GPATCH1	93	88.476	ENSPPAG00000020990	GPATCH1	91	87.825	Pan_paniscus
ENSEASG00005021162	GPATCH1	93	89.938	ENSPPRG00000017245	GPATCH1	90	89.218	Panthera_pardus
ENSEASG00005021162	GPATCH1	93	91.034	ENSPTIG00000019649	GPATCH1	91	89.929	Panthera_tigris_altaica
ENSEASG00005021162	GPATCH1	93	88.724	ENSPTRG00000010803	GPATCH1	91	87.943	Pan_troglodytes
ENSEASG00005021162	GPATCH1	93	89.219	ENSPANG00000012374	GPATCH1	95	88.298	Papio_anubis
ENSEASG00005021162	GPATCH1	87	57.436	ENSPKIG00000020745	gpatch1	80	57.284	Paramormyrops_kingsleyae
ENSEASG00005021162	GPATCH1	93	64.061	ENSPSIG00000013433	GPATCH1	90	65.207	Pelodiscus_sinensis
ENSEASG00005021162	GPATCH1	100	79.221	ENSPEMG00000000636	Gpatch1	91	82.583	Peromyscus_maniculatus_bairdii
ENSEASG00005021162	GPATCH1	93	75.187	ENSPCIG00000021003	GPATCH1	95	74.201	Phascolarctos_cinereus
ENSEASG00005021162	GPATCH1	80	49.713	ENSPREG00000008264	gpatch1	99	45.465	Poecilia_reticulata
ENSEASG00005021162	GPATCH1	93	85.502	ENSPPYG00000009824	GPATCH1	90	85.106	Pongo_abelii
ENSEASG00005021162	GPATCH1	84	78.075	ENSPCAG00000005931	GPATCH1	83	77.053	Procavia_capensis
ENSEASG00005021162	GPATCH1	90	85.531	ENSPCOG00000009674	GPATCH1	96	83.353	Propithecus_coquereli
ENSEASG00005021162	GPATCH1	85	88.414	ENSPVAG00000017767	GPATCH1	90	88.414	Pteropus_vampyrus
ENSEASG00005021162	GPATCH1	88	55.442	ENSPNYG00000018189	gpatch1	97	53.365	Pundamilia_nyererei
ENSEASG00005021162	GPATCH1	91	53.086	ENSPNAG00000013187	gpatch1	91	53.281	Pygocentrus_nattereri
ENSEASG00005021162	GPATCH1	93	85.357	ENSRNOG00000011584	Gpatch1	91	84.242	Rattus_norvegicus
ENSEASG00005021162	GPATCH1	100	80.196	ENSRBIG00000034723	GPATCH1	92	81.775	Rhinopithecus_bieti
ENSEASG00005021162	GPATCH1	93	89.343	ENSRROG00000024428	GPATCH1	91	88.652	Rhinopithecus_roxellana
ENSEASG00005021162	GPATCH1	93	88.104	ENSSBOG00000034650	GPATCH1	91	87.470	Saimiri_boliviensis_boliviensis
ENSEASG00005021162	GPATCH1	93	75.062	ENSSHAG00000016016	GPATCH1	90	74.289	Sarcophilus_harrisii
ENSEASG00005021162	GPATCH1	88	55.954	ENSSFOG00015011535	gpatch1	89	53.882	Scleropages_formosus
ENSEASG00005021162	GPATCH1	88	49.938	ENSSMAG00000002883	gpatch1	93	46.970	Scophthalmus_maximus
ENSEASG00005021162	GPATCH1	88	52.447	ENSSDUG00000007444	gpatch1	89	50.335	Seriola_dumerili
ENSEASG00005021162	GPATCH1	88	52.321	ENSSLDG00000002856	gpatch1	98	49.830	Seriola_lalandi_dorsalis
ENSEASG00005021162	GPATCH1	79	85.420	ENSSARG00000004108	GPATCH1	72	85.420	Sorex_araneus
ENSEASG00005021162	GPATCH1	93	90.932	ENSSSCG00000002865	GPATCH1	94	90.047	Sus_scrofa
ENSEASG00005021162	GPATCH1	92	64.176	ENSTGUG00000009401	GPATCH1	94	61.530	Taeniopygia_guttata
ENSEASG00005021162	GPATCH1	87	52.243	ENSTRUG00000005785	-	90	49.646	Takifugu_rubripes
ENSEASG00005021162	GPATCH1	87	52.243	ENSTRUG00000025081	gpatch1	90	49.646	Takifugu_rubripes
ENSEASG00005021162	GPATCH1	87	53.255	ENSTNIG00000002554	gpatch1	99	53.982	Tetraodon_nigroviridis
ENSEASG00005021162	GPATCH1	68	76.601	ENSTBEG00000007750	-	83	76.601	Tupaia_belangeri
ENSEASG00005021162	GPATCH1	93	82.156	ENSTTRG00000012221	GPATCH1	99	80.108	Tursiops_truncatus
ENSEASG00005021162	GPATCH1	100	88.187	ENSUMAG00000014645	GPATCH1	97	91.250	Ursus_maritimus
ENSEASG00005021162	GPATCH1	81	98.286	ENSVPAG00000010313	GPATCH1	85	98.370	Vicugna_pacos
ENSEASG00005021162	GPATCH1	93	89.950	ENSVVUG00000016572	GPATCH1	91	89.231	Vulpes_vulpes
ENSEASG00005021162	GPATCH1	100	50.746	ENSXETG00000018276	gpatch1	93	53.439	Xenopus_tropicalis