EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005021464 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 64804 bases
Position: chrPSZQ01005245.1:15427777-15492580
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005031583	ResIII	PF04851.15	5.7e-08	1	1
ENSEASP00005031581	ResIII	PF04851.15	6.8e-08	1	1
ENSEASP00005031577	ResIII	PF04851.15	7e-08	1	1
ENSEASP00005031585	ResIII	PF04851.15	7.5e-08	1	1
ENSEASP00005031736	ResIII	PF04851.15	9.2e-08	1	1
ENSEASP00005031701	ResIII	PF04851.15	1.1e-07	1	1
ENSEASP00005031655	ResIII	PF04851.15	1.1e-07	1	1
ENSEASP00005031682	ResIII	PF04851.15	1.2e-07	1	1
ENSEASP00005031714	ResIII	PF04851.15	1.3e-07	1	1
ENSEASP00005031766	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005034322	CHD5-201	5910	-	ENSEASP00005031577	1969 (aa)	-	-
ENSEAST00005034474	CHD5-208	5175	-	ENSEASP00005031714	1724 (aa)	-	-
ENSEAST00005034461	CHD5-207	5220	-	ENSEASP00005031701	1739 (aa)	-	-
ENSEAST00005034331	CHD5-204	6069	-	ENSEASP00005031585	2022 (aa)	-	-
ENSEAST00005034327	CHD5-202	5847	-	ENSEASP00005031581	1948 (aa)	-	-
ENSEAST00005034329	CHD5-203	5799	-	ENSEASP00005031583	1932 (aa)	-	-
ENSEAST00005034497	CHD5-209	5277	-	ENSEASP00005031736	1758 (aa)	-	-
ENSEAST00005034410	CHD5-205	5325	-	ENSEASP00005031655	1774 (aa)	-	-
ENSEAST00005034531	CHD5-210	5172	-	ENSEASP00005031766	1723 (aa)	-	-
ENSEAST00005034439	CHD5-206	5232	-	ENSEASP00005031682	1743 (aa)	-	-

Gene Model

Click here to download ENSEASG00005021464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005021464's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005021464	CHD5	96	79.915	ENSEASG00005016150	-	88	83.028
ENSEASG00005021464	CHD5	90	83.105	ENSEASG00005019360	CHD3	86	84.834
ENSEASG00005021464	CHD5	57	34.936	ENSEASG00005023433	CHD6	88	41.954

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005021464	CHD5	96	97.608	ENSG00000116254	CHD5	99	94.980	Homo_sapiens
ENSEASG00005021464	CHD5	97	95.117	ENSAMEG00000009880	CHD5	100	95.127	Ailuropoda_melanoleuca
ENSEASG00005021464	CHD5	91	87.264	ENSACIG00000012582	chd5	87	89.908	Amphilophus_citrinellus
ENSEASG00005021464	CHD5	92	79.299	ENSAOCG00000020356	chd5	97	74.975	Amphiprion_ocellaris
ENSEASG00005021464	CHD5	96	93.671	ENSAPLG00000015475	CHD5	90	93.671	Anas_platyrhynchos
ENSEASG00005021464	CHD5	98	88.739	ENSACAG00000002441	CHD5	98	81.192	Anolis_carolinensis
ENSEASG00005021464	CHD5	90	96.774	ENSANAG00000001078	CHD5	91	94.405	Aotus_nancymaae
ENSEASG00005021464	CHD5	95	74.074	ENSACLG00000003012	chd5	96	75.014	Astatotilapia_calliptera
ENSEASG00005021464	CHD5	93	78.297	ENSAMXG00000008921	chd5	99	77.076	Astyanax_mexicanus
ENSEASG00005021464	CHD5	95	97.521	ENSBTAG00000040477	CHD5	99	95.925	Bos_taurus
ENSEASG00005021464	CHD5	99	97.934	ENSCJAG00000000101	CHD5	99	94.826	Callithrix_jacchus
ENSEASG00005021464	CHD5	91	95.974	ENSCAFG00000019545	CHD5	99	95.978	Canis_familiaris
ENSEASG00005021464	CHD5	99	94.973	ENSCAFG00020008689	CHD5	99	94.973	Canis_lupus_dingo
ENSEASG00005021464	CHD5	99	93.503	ENSCHIG00000015027	CHD5	99	93.050	Capra_hircus
ENSEASG00005021464	CHD5	95	97.608	ENSTSYG00000033991	CHD5	99	92.439	Carlito_syrichta
ENSEASG00005021464	CHD5	97	93.531	ENSCAPG00000009294	CHD5	99	93.627	Cavia_aperea
ENSEASG00005021464	CHD5	97	93.552	ENSCPOG00000025080	CHD5	99	93.627	Cavia_porcellus
ENSEASG00005021464	CHD5	99	96.735	ENSCCAG00000024756	CHD5	99	94.877	Cebus_capucinus
ENSEASG00005021464	CHD5	99	97.143	ENSCATG00000043011	CHD5	99	94.160	Cercocebus_atys
ENSEASG00005021464	CHD5	99	95.951	ENSCLAG00000010589	CHD5	99	93.913	Chinchilla_lanigera
ENSEASG00005021464	CHD5	96	98.086	ENSCSAG00000000733	CHD5	99	95.133	Chlorocebus_sabaeus
ENSEASG00005021464	CHD5	88	97.605	ENSCPBG00000019363	CHD5	99	88.852	Chrysemys_picta_bellii
ENSEASG00005021464	CHD5	97	95.065	ENSCANG00000032302	CHD5	99	95.109	Colobus_angolensis_palliatus
ENSEASG00005021464	CHD5	62	92.495	ENSCGRG00001011042	Chd5	100	93.346	Cricetulus_griseus_chok1gshd
ENSEASG00005021464	CHD5	99	96.327	ENSCGRG00000011341	Chd5	99	93.439	Cricetulus_griseus_crigri
ENSEASG00005021464	CHD5	95	90.338	ENSDARG00000105083	chd5	88	92.093	Danio_rerio
ENSEASG00005021464	CHD5	94	76.498	ENSDARG00000025789	chd4b	98	66.028	Danio_rerio
ENSEASG00005021464	CHD5	95	94.907	ENSDNOG00000046342	CHD5	99	89.959	Dasypus_novemcinctus
ENSEASG00005021464	CHD5	99	94.779	ENSDORG00000005923	Chd5	99	93.815	Dipodomys_ordii
ENSEASG00005021464	CHD5	100	99.597	ENSECAG00000025043	CHD5	100	99.597	Equus_caballus
ENSEASG00005021464	CHD5	76	99.526	ENSEEUG00000002772	CHD5	77	99.531	Erinaceus_europaeus
ENSEASG00005021464	CHD5	89	92.398	ENSELUG00000010742	chd5	89	91.628	Esox_lucius
ENSEASG00005021464	CHD5	98	95.541	ENSFCAG00000006319	CHD5	99	95.545	Felis_catus
ENSEASG00005021464	CHD5	96	90.283	ENSFALG00000009740	CHD5	99	86.450	Ficedula_albicollis
ENSEASG00005021464	CHD5	96	95.775	ENSFDAG00000012881	CHD5	97	92.176	Fukomys_damarensis
ENSEASG00005021464	CHD5	92	92.130	ENSGALG00000000747	CHD5	99	85.242	Gallus_gallus
ENSEASG00005021464	CHD5	61	80.773	ENSGACG00000004389	chd5	99	78.961	Gasterosteus_aculeatus
ENSEASG00005021464	CHD5	93	97.525	ENSGAGG00000001590	CHD5	99	97.525	Gopherus_agassizii
ENSEASG00005021464	CHD5	96	97.608	ENSGGOG00000000708	CHD5	99	94.953	Gorilla_gorilla
ENSEASG00005021464	CHD5	95	74.928	ENSHBUG00000013453	chd5	96	75.828	Haplochromis_burtoni
ENSEASG00005021464	CHD5	99	97.095	ENSHGLG00000018184	CHD5	99	93.737	Heterocephalus_glaber_female
ENSEASG00005021464	CHD5	96	95.370	ENSHGLG00100013261	CHD5	99	86.207	Heterocephalus_glaber_male
ENSEASG00005021464	CHD5	93	90.173	ENSIPUG00000005446	chd5	89	90.173	Ictalurus_punctatus
ENSEASG00005021464	CHD5	97	95.528	ENSSTOG00000002778	CHD5	99	94.080	Ictidomys_tridecemlineatus
ENSEASG00005021464	CHD5	99	92.546	ENSJJAG00000019072	Chd5	99	93.439	Jaculus_jaculus
ENSEASG00005021464	CHD5	94	92.754	ENSLOCG00000004944	chd5	98	79.294	Lepisosteus_oculatus
ENSEASG00005021464	CHD5	99	99.170	ENSLAFG00000006348	CHD5	100	95.747	Loxodonta_africana
ENSEASG00005021464	CHD5	99	96.735	ENSMFAG00000033993	CHD5	99	95.207	Macaca_fascicularis
ENSEASG00005021464	CHD5	99	96.735	ENSMMUG00000016838	CHD5	99	94.862	Macaca_mulatta
ENSEASG00005021464	CHD5	99	96.735	ENSMNEG00000040044	CHD5	99	95.184	Macaca_nemestrina
ENSEASG00005021464	CHD5	97	91.637	ENSMLEG00000039166	CHD5	99	91.786	Mandrillus_leucophaeus
ENSEASG00005021464	CHD5	95	72.945	ENSMZEG00005000841	chd5	91	80.445	Maylandia_zebra
ENSEASG00005021464	CHD5	95	92.917	ENSMGAG00000001055	CHD5	99	85.525	Meleagris_gallopavo
ENSEASG00005021464	CHD5	98	93.226	ENSMICG00000017862	CHD5	99	95.663	Microcebus_murinus
ENSEASG00005021464	CHD5	99	96.735	ENSMOCG00000011049	Chd5	99	93.439	Microtus_ochrogaster
ENSEASG00005021464	CHD5	83	97.129	ENSMODG00000006294	CHD5	80	94.457	Monodelphis_domestica
ENSEASG00005021464	CHD5	95	88.208	ENSMALG00000002831	chd5	86	90.826	Monopterus_albus
ENSEASG00005021464	CHD5	98	93.433	MGP_CAROLIEiJ_G0026857	Chd5	99	93.439	Mus_caroli
ENSEASG00005021464	CHD5	97	95.984	ENSMUSG00000005045	Chd5	99	92.886	Mus_musculus
ENSEASG00005021464	CHD5	98	93.410	MGP_PahariEiJ_G0029205	Chd5	99	93.234	Mus_pahari
ENSEASG00005021464	CHD5	97	95.984	MGP_SPRETEiJ_G0027850	Chd5	99	93.234	Mus_spretus
ENSEASG00005021464	CHD5	99	96.735	ENSMPUG00000007122	CHD5	97	95.327	Mustela_putorius_furo
ENSEASG00005021464	CHD5	97	94.779	ENSNGAG00000019812	Chd5	99	91.542	Nannospalax_galili
ENSEASG00005021464	CHD5	94	98.214	ENSNLEG00000010320	CHD5	99	92.508	Nomascus_leucogenys
ENSEASG00005021464	CHD5	86	91.080	ENSOPRG00000004304	CHD5	85	92.237	Ochotona_princeps
ENSEASG00005021464	CHD5	96	95.370	ENSODEG00000010262	CHD5	99	93.889	Octodon_degus
ENSEASG00005021464	CHD5	89	88.208	ENSONIG00000000619	chd5	83	90.826	Oreochromis_niloticus
ENSEASG00005021464	CHD5	94	92.377	ENSOANG00000001819	CHD5	88	92.377	Ornithorhynchus_anatinus
ENSEASG00005021464	CHD5	95	97.510	ENSOGAG00000005703	CHD5	100	92.890	Otolemur_garnettii
ENSEASG00005021464	CHD5	98	97.521	ENSOARG00000013425	CHD5	97	94.857	Ovis_aries
ENSEASG00005021464	CHD5	96	97.608	ENSPPAG00000034048	CHD5	99	94.956	Pan_paniscus
ENSEASG00005021464	CHD5	99	97.551	ENSPPRG00000009453	CHD5	99	94.982	Panthera_pardus
ENSEASG00005021464	CHD5	97	87.410	ENSPTIG00000013926	CHD5	99	87.737	Panthera_tigris_altaica
ENSEASG00005021464	CHD5	96	97.608	ENSPTRG00000000075	CHD5	99	94.931	Pan_troglodytes
ENSEASG00005021464	CHD5	99	97.143	ENSPANG00000006765	CHD5	99	95.133	Papio_anubis
ENSEASG00005021464	CHD5	98	78.639	ENSPKIG00000004282	chd5	98	78.698	Paramormyrops_kingsleyae
ENSEASG00005021464	CHD5	84	95.808	ENSPSIG00000006414	CHD5	100	81.319	Pelodiscus_sinensis
ENSEASG00005021464	CHD5	70	94.754	ENSPEMG00000014799	Chd5	99	93.726	Peromyscus_maniculatus_bairdii
ENSEASG00005021464	CHD5	99	97.500	ENSPCIG00000028310	CHD5	99	88.900	Phascolarctos_cinereus
ENSEASG00005021464	CHD5	92	87.500	ENSPLAG00000005343	chd5	93	85.417	Poecilia_latipinna
ENSEASG00005021464	CHD5	94	96.562	ENSPPYG00000001952	CHD5	99	92.868	Pongo_abelii
ENSEASG00005021464	CHD5	99	96.735	ENSPCOG00000022930	CHD5	99	95.389	Propithecus_coquereli
ENSEASG00005021464	CHD5	94	86.792	ENSPNYG00000003183	chd5	89	89.450	Pundamilia_nyererei
ENSEASG00005021464	CHD5	98	93.535	ENSRNOG00000011268	Chd5	99	93.439	Rattus_norvegicus
ENSEASG00005021464	CHD5	99	97.143	ENSRBIG00000032140	CHD5	97	94.312	Rhinopithecus_bieti
ENSEASG00005021464	CHD5	97	97.143	ENSRROG00000041146	CHD5	98	94.849	Rhinopithecus_roxellana
ENSEASG00005021464	CHD5	98	90.562	ENSSBOG00000001955	CHD5	99	96.933	Saimiri_boliviensis_boliviensis
ENSEASG00005021464	CHD5	99	83.496	ENSSHAG00000018641	CHD5	100	84.757	Sarcophilus_harrisii
ENSEASG00005021464	CHD5	93	90.338	ENSSFOG00015006296	chd5	92	87.059	Scleropages_formosus
ENSEASG00005021464	CHD5	92	87.500	ENSSDUG00000017526	chd5	93	90.826	Seriola_dumerili
ENSEASG00005021464	CHD5	99	95.417	ENSSPUG00000010622	CHD5	89	95.417	Sphenodon_punctatus
ENSEASG00005021464	CHD5	98	97.934	ENSSSCG00000003366	CHD5	99	95.978	Sus_scrofa
ENSEASG00005021464	CHD5	96	91.810	ENSTGUG00000002634	-	100	82.873	Taeniopygia_guttata
ENSEASG00005021464	CHD5	60	78.046	ENSTNIG00000004346	chd5	99	79.371	Tetraodon_nigroviridis
ENSEASG00005021464	CHD5	99	96.735	ENSTTRG00000010468	CHD5	99	93.604	Tursiops_truncatus
ENSEASG00005021464	CHD5	100	93.478	ENSUAMG00000024509	CHD5	99	94.918	Ursus_americanus
ENSEASG00005021464	CHD5	96	90.885	ENSUMAG00000024173	CHD5	98	92.091	Ursus_maritimus
ENSEASG00005021464	CHD5	99	93.766	ENSVVUG00000026480	CHD5	96	98.374	Vulpes_vulpes
ENSEASG00005021464	CHD5	94	93.548	ENSXETG00000002904	chd5	99	78.511	Xenopus_tropicalis
ENSEASG00005021464	CHD5	64	84.848	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus