EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005022487 (Gene tree)
Gene ID: -
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 2389 bases
Position: chrPSZQ01002137.1:10421831-10424219
Accession: 20422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005032886	RNA_pol_L_2	PF13656.6	3.4e-28	1	1
ENSEASP00005032889	RNA_pol_L_2	PF13656.6	3.4e-28	1	1
ENSEASP00005032886	RNA_pol_L	PF01193.24	6.4e-13	1	1
ENSEASP00005032889	RNA_pol_L	PF01193.24	6.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005035843	POLR1D-202	1322	-	ENSEASP00005032889	129 (aa)	-	UPI00071A4B36
ENSEAST00005035840	POLR1D-201	1428	-	ENSEASP00005032886	129 (aa)	-	UPI00071A4B36

Gene Model

Click here to download ENSEASG00005022487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005022487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005022487	POLR1D	80	32.039	ENSEASG00005016864	-	85	32.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005022487	POLR1D	99	97.656	ENSG00000186184	POLR1D	96	97.656	Homo_sapiens
ENSEASG00005022487	POLR1D	83	68.224	ENSAPOG00000021882	polr1d	94	70.000	Acanthochromis_polyacanthus
ENSEASG00005022487	POLR1D	93	97.500	ENSAMEG00000019095	POLR1D	96	97.500	Ailuropoda_melanoleuca
ENSEASG00005022487	POLR1D	83	71.296	ENSACIG00000013328	polr1d	94	71.296	Amphilophus_citrinellus
ENSEASG00005022487	POLR1D	83	69.159	ENSAOCG00000018500	polr1d	94	69.159	Amphiprion_ocellaris
ENSEASG00005022487	POLR1D	81	69.524	ENSAPEG00000009489	polr1d	92	69.524	Amphiprion_percula
ENSEASG00005022487	POLR1D	83	68.224	ENSATEG00000019322	polr1d	94	68.224	Anabas_testudineus
ENSEASG00005022487	POLR1D	82	68.868	ENSACAG00000015753	POLR1D	91	68.868	Anolis_carolinensis
ENSEASG00005022487	POLR1D	99	96.875	ENSANAG00000024486	POLR1D	96	96.875	Aotus_nancymaae
ENSEASG00005022487	POLR1D	83	71.963	ENSACLG00000023805	polr1d	94	71.963	Astatotilapia_calliptera
ENSEASG00005022487	POLR1D	82	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSEASG00005022487	POLR1D	99	94.531	ENSBTAG00000008642	POLR1D	96	94.531	Bos_taurus
ENSEASG00005022487	POLR1D	99	94.531	ENSBTAG00000033252	-	96	94.531	Bos_taurus
ENSEASG00005022487	POLR1D	64	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSEASG00005022487	POLR1D	99	96.094	ENSCJAG00000044669	POLR1D	96	96.094	Callithrix_jacchus
ENSEASG00005022487	POLR1D	99	97.656	ENSCAFG00000006755	POLR1D	96	97.656	Canis_familiaris
ENSEASG00005022487	POLR1D	99	95.312	ENSCHIG00000021910	POLR1D	96	95.312	Capra_hircus
ENSEASG00005022487	POLR1D	94	83.740	ENSTSYG00000034852	-	93	83.929	Carlito_syrichta
ENSEASG00005022487	POLR1D	92	92.437	ENSTSYG00000026817	-	89	92.437	Carlito_syrichta
ENSEASG00005022487	POLR1D	100	55.039	ENSCAPG00000006058	-	100	55.039	Cavia_aperea
ENSEASG00005022487	POLR1D	100	55.814	ENSCPOG00000030450	-	100	55.814	Cavia_porcellus
ENSEASG00005022487	POLR1D	99	95.312	ENSCCAG00000021349	-	96	95.312	Cebus_capucinus
ENSEASG00005022487	POLR1D	99	77.344	ENSCCAG00000020191	-	96	77.344	Cebus_capucinus
ENSEASG00005022487	POLR1D	98	87.302	ENSCATG00000022900	-	94	87.302	Cercocebus_atys
ENSEASG00005022487	POLR1D	99	96.094	ENSCATG00000030710	-	96	96.094	Cercocebus_atys
ENSEASG00005022487	POLR1D	91	96.581	ENSCLAG00000017623	POLR1D	94	96.581	Chinchilla_lanigera
ENSEASG00005022487	POLR1D	75	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSEASG00005022487	POLR1D	99	92.969	ENSCANG00000037694	-	96	92.969	Colobus_angolensis_palliatus
ENSEASG00005022487	POLR1D	99	96.094	ENSCANG00000028632	-	96	96.094	Colobus_angolensis_palliatus
ENSEASG00005022487	POLR1D	99	95.312	ENSCGRG00001021251	Polr1d	96	95.312	Cricetulus_griseus_chok1gshd
ENSEASG00005022487	POLR1D	99	95.312	ENSCGRG00000011639	Polr1d	96	95.312	Cricetulus_griseus_crigri
ENSEASG00005022487	POLR1D	81	71.154	ENSCSEG00000018268	polr1d	95	68.468	Cynoglossus_semilaevis
ENSEASG00005022487	POLR1D	84	70.642	ENSCVAG00000018527	polr1d	96	70.642	Cyprinodon_variegatus
ENSEASG00005022487	POLR1D	84	67.593	ENSDARG00000037570	polr1d	96	67.593	Danio_rerio
ENSEASG00005022487	POLR1D	99	92.248	ENSDNOG00000046247	-	96	92.248	Dasypus_novemcinctus
ENSEASG00005022487	POLR1D	99	94.531	ENSDNOG00000043676	-	96	94.531	Dasypus_novemcinctus
ENSEASG00005022487	POLR1D	99	93.750	ENSDORG00000029155	Polr1d	96	93.750	Dipodomys_ordii
ENSEASG00005022487	POLR1D	68	43.182	FBgn0086447	l(2)37Cg	83	43.182	Drosophila_melanogaster
ENSEASG00005022487	POLR1D	92	90.756	ENSETEG00000012797	POLR1D	96	90.756	Echinops_telfairi
ENSEASG00005022487	POLR1D	67	71.264	ENSEBUG00000011748	polr1d	61	71.264	Eptatretus_burgeri
ENSEASG00005022487	POLR1D	92	96.639	ENSEEUG00000013144	POLR1D	96	96.639	Erinaceus_europaeus
ENSEASG00005022487	POLR1D	82	68.868	ENSELUG00000005105	rpac2	93	68.868	Esox_lucius
ENSEASG00005022487	POLR1D	100	98.450	ENSFCAG00000030162	POLR1D	97	98.450	Felis_catus
ENSEASG00005022487	POLR1D	74	77.083	ENSFALG00000011463	POLR1D	95	77.083	Ficedula_albicollis
ENSEASG00005022487	POLR1D	99	95.312	ENSFDAG00000004463	POLR1D	96	95.312	Fukomys_damarensis
ENSEASG00005022487	POLR1D	86	73.214	ENSFHEG00000015410	polr1d	97	73.214	Fundulus_heteroclitus
ENSEASG00005022487	POLR1D	50	71.875	ENSGALG00000007470	POLR1D	63	71.875	Gallus_gallus
ENSEASG00005022487	POLR1D	81	73.333	ENSGAFG00000001693	polr1d	92	73.333	Gambusia_affinis
ENSEASG00005022487	POLR1D	85	71.171	ENSGACG00000018585	polr1d	94	71.171	Gasterosteus_aculeatus
ENSEASG00005022487	POLR1D	82	79.245	ENSGAGG00000008503	POLR1D	93	79.245	Gopherus_agassizii
ENSEASG00005022487	POLR1D	99	97.656	ENSGGOG00000004235	POLR1D	96	97.656	Gorilla_gorilla
ENSEASG00005022487	POLR1D	83	71.963	ENSHBUG00000002111	polr1d	94	71.963	Haplochromis_burtoni
ENSEASG00005022487	POLR1D	99	93.750	ENSHGLG00000003202	POLR1D	96	93.750	Heterocephalus_glaber_female
ENSEASG00005022487	POLR1D	99	93.750	ENSHGLG00100009393	POLR1D	96	93.750	Heterocephalus_glaber_male
ENSEASG00005022487	POLR1D	85	70.909	ENSHCOG00000003258	polr1d	96	70.909	Hippocampus_comes
ENSEASG00005022487	POLR1D	82	71.698	ENSIPUG00000014810	polr1d	92	71.698	Ictalurus_punctatus
ENSEASG00005022487	POLR1D	99	96.875	ENSSTOG00000013877	POLR1D	96	96.875	Ictidomys_tridecemlineatus
ENSEASG00005022487	POLR1D	91	75.424	ENSJJAG00000021667	-	70	75.424	Jaculus_jaculus
ENSEASG00005022487	POLR1D	96	89.062	ENSJJAG00000022671	-	96	92.174	Jaculus_jaculus
ENSEASG00005022487	POLR1D	82	67.925	ENSKMAG00000015256	polr1d	93	67.925	Kryptolebias_marmoratus
ENSEASG00005022487	POLR1D	81	73.333	ENSLBEG00000015919	polr1d	92	73.333	Labrus_bergylta
ENSEASG00005022487	POLR1D	90	65.517	ENSLACG00000006810	POLR1D	96	65.517	Latimeria_chalumnae
ENSEASG00005022487	POLR1D	56	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSEASG00005022487	POLR1D	98	92.063	ENSLAFG00000032290	POLR1D	95	92.063	Loxodonta_africana
ENSEASG00005022487	POLR1D	93	95.833	ENSMFAG00000045264	POLR1D	93	95.833	Macaca_fascicularis
ENSEASG00005022487	POLR1D	99	76.562	ENSMMUG00000041570	-	95	76.562	Macaca_mulatta
ENSEASG00005022487	POLR1D	86	96.396	ENSMMUG00000020386	POLR1D	96	96.396	Macaca_mulatta
ENSEASG00005022487	POLR1D	99	96.875	ENSMNEG00000008630	-	96	96.875	Macaca_nemestrina
ENSEASG00005022487	POLR1D	99	79.688	ENSMNEG00000038120	-	96	79.688	Macaca_nemestrina
ENSEASG00005022487	POLR1D	99	85.938	ENSMLEG00000032251	-	96	85.938	Mandrillus_leucophaeus
ENSEASG00005022487	POLR1D	99	96.875	ENSMLEG00000041048	-	96	96.875	Mandrillus_leucophaeus
ENSEASG00005022487	POLR1D	78	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSEASG00005022487	POLR1D	78	75.000	ENSMZEG00005006638	polr1d	88	75.000	Maylandia_zebra
ENSEASG00005022487	POLR1D	71	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSEASG00005022487	POLR1D	99	94.531	ENSMAUG00000001946	Polr1d	96	94.531	Mesocricetus_auratus
ENSEASG00005022487	POLR1D	99	78.906	ENSMICG00000007349	-	97	78.906	Microcebus_murinus
ENSEASG00005022487	POLR1D	99	96.094	ENSMICG00000016883	-	96	96.094	Microcebus_murinus
ENSEASG00005022487	POLR1D	99	95.312	ENSMOCG00000021288	Polr1d	96	95.312	Microtus_ochrogaster
ENSEASG00005022487	POLR1D	83	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSEASG00005022487	POLR1D	82	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSEASG00005022487	POLR1D	83	68.224	ENSMALG00000010652	polr1d	94	68.224	Monopterus_albus
ENSEASG00005022487	POLR1D	100	89.922	MGP_CAROLIEiJ_G0028034	Polr1d	97	89.922	Mus_caroli
ENSEASG00005022487	POLR1D	100	89.922	ENSMUSG00000029642	Polr1d	97	89.922	Mus_musculus
ENSEASG00005022487	POLR1D	100	89.922	MGP_PahariEiJ_G0024600	Polr1d	97	89.922	Mus_pahari
ENSEASG00005022487	POLR1D	100	90.698	MGP_SPRETEiJ_G0029032	Polr1d	97	90.698	Mus_spretus
ENSEASG00005022487	POLR1D	99	95.312	ENSMLUG00000027169	-	96	95.312	Myotis_lucifugus
ENSEASG00005022487	POLR1D	98	85.039	ENSMLUG00000004118	-	95	85.039	Myotis_lucifugus
ENSEASG00005022487	POLR1D	84	97.222	ENSNGAG00000006014	Polr1d	93	97.222	Nannospalax_galili
ENSEASG00005022487	POLR1D	83	71.963	ENSNBRG00000020327	polr1d	94	71.963	Neolamprologus_brichardi
ENSEASG00005022487	POLR1D	99	97.656	ENSNLEG00000000358	POLR1D	96	97.656	Nomascus_leucogenys
ENSEASG00005022487	POLR1D	98	80.159	ENSODEG00000014801	-	94	80.159	Octodon_degus
ENSEASG00005022487	POLR1D	98	95.238	ENSODEG00000005294	-	95	95.238	Octodon_degus
ENSEASG00005022487	POLR1D	81	82.857	ENSOANG00000008708	-	97	82.857	Ornithorhynchus_anatinus
ENSEASG00005022487	POLR1D	99	95.312	ENSOCUG00000015706	POLR1D	79	95.312	Oryctolagus_cuniculus
ENSEASG00005022487	POLR1D	84	68.807	ENSORLG00000010257	polr1d	96	68.807	Oryzias_latipes
ENSEASG00005022487	POLR1D	88	66.667	ENSORLG00020000533	polr1d	77	66.667	Oryzias_latipes_hni
ENSEASG00005022487	POLR1D	90	67.241	ENSORLG00015013267	polr1d	77	67.241	Oryzias_latipes_hsok
ENSEASG00005022487	POLR1D	89	67.826	ENSOMEG00000014912	polr1d	77	67.826	Oryzias_melastigma
ENSEASG00005022487	POLR1D	99	96.094	ENSOGAG00000014601	POLR1D	96	96.094	Otolemur_garnettii
ENSEASG00005022487	POLR1D	93	95.000	ENSOARG00000017005	POLR1D	92	95.000	Ovis_aries
ENSEASG00005022487	POLR1D	99	97.656	ENSPPAG00000028138	POLR1D	96	97.656	Pan_paniscus
ENSEASG00005022487	POLR1D	100	98.450	ENSPPRG00000003381	POLR1D	97	98.450	Panthera_pardus
ENSEASG00005022487	POLR1D	93	98.333	ENSPTIG00000018137	POLR1D	90	98.333	Panthera_tigris_altaica
ENSEASG00005022487	POLR1D	99	97.656	ENSPTRG00000005734	POLR1D	96	97.656	Pan_troglodytes
ENSEASG00005022487	POLR1D	99	96.875	ENSPANG00000020259	-	96	96.875	Papio_anubis
ENSEASG00005022487	POLR1D	99	85.156	ENSPANG00000035051	-	96	85.156	Papio_anubis
ENSEASG00005022487	POLR1D	89	61.739	ENSPKIG00000021891	polr1d	90	51.754	Paramormyrops_kingsleyae
ENSEASG00005022487	POLR1D	86	75.893	ENSPSIG00000011822	POLR1D	87	75.893	Pelodiscus_sinensis
ENSEASG00005022487	POLR1D	84	67.890	ENSPMGG00000010359	polr1d	95	67.890	Periophthalmus_magnuspinnatus
ENSEASG00005022487	POLR1D	94	58.197	ENSPMGG00000012998	POLR1D	90	58.197	Periophthalmus_magnuspinnatus
ENSEASG00005022487	POLR1D	99	91.406	ENSPEMG00000006336	-	96	91.406	Peromyscus_maniculatus_bairdii
ENSEASG00005022487	POLR1D	83	57.944	ENSPMAG00000004228	polr1d	90	57.944	Petromyzon_marinus
ENSEASG00005022487	POLR1D	82	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSEASG00005022487	POLR1D	81	73.333	ENSPFOG00000023343	polr1d	92	75.000	Poecilia_formosa
ENSEASG00005022487	POLR1D	81	73.333	ENSPLAG00000009675	polr1d	92	73.333	Poecilia_latipinna
ENSEASG00005022487	POLR1D	81	73.333	ENSPMEG00000004628	polr1d	92	73.333	Poecilia_mexicana
ENSEASG00005022487	POLR1D	81	73.333	ENSPREG00000022032	polr1d	92	73.333	Poecilia_reticulata
ENSEASG00005022487	POLR1D	99	94.531	ENSPCOG00000028175	POLR1D	96	94.531	Propithecus_coquereli
ENSEASG00005022487	POLR1D	83	71.963	ENSPNYG00000000107	polr1d	94	71.963	Pundamilia_nyererei
ENSEASG00005022487	POLR1D	78	69.307	ENSPNAG00000001512	polr1d	87	68.269	Pygocentrus_nattereri
ENSEASG00005022487	POLR1D	99	92.969	ENSRBIG00000000336	-	96	92.969	Rhinopithecus_bieti
ENSEASG00005022487	POLR1D	99	96.875	ENSRBIG00000036378	-	96	96.875	Rhinopithecus_bieti
ENSEASG00005022487	POLR1D	99	96.875	ENSRROG00000042232	-	96	96.875	Rhinopithecus_roxellana
ENSEASG00005022487	POLR1D	99	92.969	ENSRROG00000026751	-	96	92.969	Rhinopithecus_roxellana
ENSEASG00005022487	POLR1D	92	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSEASG00005022487	POLR1D	88	92.105	ENSSBOG00000030146	-	84	92.105	Saimiri_boliviensis_boliviensis
ENSEASG00005022487	POLR1D	99	96.875	ENSSBOG00000028482	-	96	96.875	Saimiri_boliviensis_boliviensis
ENSEASG00005022487	POLR1D	85	80.909	ENSSHAG00000001190	POLR1D	85	80.909	Sarcophilus_harrisii
ENSEASG00005022487	POLR1D	84	75.000	ENSSFOG00015011375	polr1d	95	75.000	Scleropages_formosus
ENSEASG00005022487	POLR1D	83	69.159	ENSSMAG00000011861	polr1d	94	69.159	Scophthalmus_maximus
ENSEASG00005022487	POLR1D	83	68.224	ENSSDUG00000011930	polr1d	94	68.224	Seriola_dumerili
ENSEASG00005022487	POLR1D	85	65.455	ENSSLDG00000023871	polr1d	93	65.455	Seriola_lalandi_dorsalis
ENSEASG00005022487	POLR1D	99	96.875	ENSSARG00000007840	POLR1D	96	96.875	Sorex_araneus
ENSEASG00005022487	POLR1D	78	79.000	ENSSPUG00000005786	POLR1D	91	75.472	Sphenodon_punctatus
ENSEASG00005022487	POLR1D	84	70.642	ENSSPAG00000011764	polr1d	96	70.642	Stegastes_partitus
ENSEASG00005022487	POLR1D	100	94.574	ENSSSCG00000009310	POLR1D	97	94.574	Sus_scrofa
ENSEASG00005022487	POLR1D	74	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSEASG00005022487	POLR1D	81	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSEASG00005022487	POLR1D	92	95.798	ENSTBEG00000007006	POLR1D	96	95.798	Tupaia_belangeri
ENSEASG00005022487	POLR1D	99	97.656	ENSUAMG00000011413	POLR1D	96	97.656	Ursus_americanus
ENSEASG00005022487	POLR1D	92	97.479	ENSUMAG00000016968	POLR1D	93	97.479	Ursus_maritimus
ENSEASG00005022487	POLR1D	99	97.656	ENSVVUG00000009216	POLR1D	96	97.656	Vulpes_vulpes
ENSEASG00005022487	POLR1D	76	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSEASG00005022487	POLR1D	76	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus