EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005022835 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 9003 bases
Position: chrPSZQ01003664.1:25815120-25824122
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005033337	RRM_1	PF00076.22	4.4e-15	1	1
ENSEASP00005033337	RRM_3	PF08777.11	2e-31	1	1
ENSEASP00005033337	La	PF05383.17	7.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005036350	SSB-201	1273	-	ENSEASP00005033337	405 (aa)	-	UPI00071A41D6

Gene Model

Click here to download ENSEASG00005022835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005022835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005022835	SSB	100	95.588	ENSG00000138385	SSB	100	99.167	Homo_sapiens
ENSEASG00005022835	SSB	98	55.473	ENSAPOG00000003448	ssb	100	55.911	Acanthochromis_polyacanthus
ENSEASG00005022835	SSB	100	93.095	ENSAMEG00000010507	SSB	100	93.095	Ailuropoda_melanoleuca
ENSEASG00005022835	SSB	92	59.091	ENSACIG00000001738	ssb	97	58.933	Amphilophus_citrinellus
ENSEASG00005022835	SSB	98	55.721	ENSAOCG00000020398	ssb	100	56.404	Amphiprion_ocellaris
ENSEASG00005022835	SSB	98	55.970	ENSAPEG00000020395	ssb	100	56.650	Amphiprion_percula
ENSEASG00005022835	SSB	99	57.635	ENSATEG00000016884	ssb	100	58.128	Anabas_testudineus
ENSEASG00005022835	SSB	100	70.755	ENSAPLG00000006109	SSB	100	72.235	Anas_platyrhynchos
ENSEASG00005022835	SSB	100	67.561	ENSACAG00000017008	SSB	99	67.561	Anolis_carolinensis
ENSEASG00005022835	SSB	100	86.420	ENSANAG00000027195	-	100	86.420	Aotus_nancymaae
ENSEASG00005022835	SSB	99	55.693	ENSACLG00000010798	ssb	100	55.446	Astatotilapia_calliptera
ENSEASG00005022835	SSB	98	55.637	ENSAMXG00000012606	ssb	100	56.971	Astyanax_mexicanus
ENSEASG00005022835	SSB	100	96.790	ENSBTAG00000008716	SSB	100	96.790	Bos_taurus
ENSEASG00005022835	SSB	73	35.430	WBGene00016653	C44E4.4	93	32.440	Caenorhabditis_elegans
ENSEASG00005022835	SSB	100	95.309	ENSCJAG00000045073	SSB	100	95.309	Callithrix_jacchus
ENSEASG00005022835	SSB	100	96.305	ENSCAFG00000012418	SSB	100	96.305	Canis_familiaris
ENSEASG00005022835	SSB	100	96.305	ENSCAFG00020002900	SSB	100	96.305	Canis_lupus_dingo
ENSEASG00005022835	SSB	100	90.123	ENSCHIG00000022196	-	100	90.123	Capra_hircus
ENSEASG00005022835	SSB	100	96.296	ENSCHIG00000022624	-	100	96.296	Capra_hircus
ENSEASG00005022835	SSB	100	95.556	ENSTSYG00000000097	SSB	100	95.556	Carlito_syrichta
ENSEASG00005022835	SSB	100	96.543	ENSCPOG00000003338	SSB	100	96.543	Cavia_porcellus
ENSEASG00005022835	SSB	100	95.802	ENSCCAG00000035147	SSB	100	95.802	Cebus_capucinus
ENSEASG00005022835	SSB	100	71.358	ENSCATG00000042909	-	100	71.358	Cercocebus_atys
ENSEASG00005022835	SSB	100	75.062	ENSCATG00000036701	SSB	100	75.062	Cercocebus_atys
ENSEASG00005022835	SSB	100	96.049	ENSCLAG00000015617	-	100	96.049	Chinchilla_lanigera
ENSEASG00005022835	SSB	98	87.154	ENSCSAG00000018390	-	100	87.154	Chlorocebus_sabaeus
ENSEASG00005022835	SSB	100	95.802	ENSCSAG00000015200	SSB	89	95.802	Chlorocebus_sabaeus
ENSEASG00005022835	SSB	100	95.556	ENSCHOG00000007763	SSB	100	95.556	Choloepus_hoffmanni
ENSEASG00005022835	SSB	100	79.218	ENSCPBG00000006519	SSB	100	79.951	Chrysemys_picta_bellii
ENSEASG00005022835	SSB	100	96.049	ENSCANG00000027695	SSB	100	96.049	Colobus_angolensis_palliatus
ENSEASG00005022835	SSB	98	75.439	ENSCANG00000028838	-	95	75.439	Colobus_angolensis_palliatus
ENSEASG00005022835	SSB	99	81.592	ENSCANG00000033240	-	99	81.592	Colobus_angolensis_palliatus
ENSEASG00005022835	SSB	99	80.344	ENSCGRG00001024831	Ssb	99	81.572	Cricetulus_griseus_chok1gshd
ENSEASG00005022835	SSB	99	80.344	ENSCGRG00000005387	Ssb	99	81.572	Cricetulus_griseus_crigri
ENSEASG00005022835	SSB	98	57.250	ENSCSEG00000011599	ssb	99	58.000	Cynoglossus_semilaevis
ENSEASG00005022835	SSB	99	57.740	ENSCVAG00000021558	ssb	100	58.231	Cyprinodon_variegatus
ENSEASG00005022835	SSB	98	57.816	ENSDARG00000029252	ssb	99	57.816	Danio_rerio
ENSEASG00005022835	SSB	100	94.815	ENSDNOG00000013450	SSB	100	94.815	Dasypus_novemcinctus
ENSEASG00005022835	SSB	100	85.158	ENSDORG00000005543	Ssb	100	85.158	Dipodomys_ordii
ENSEASG00005022835	SSB	84	34.384	FBgn0011638	La	92	34.737	Drosophila_melanogaster
ENSEASG00005022835	SSB	58	94.527	ENSETEG00000004614	-	61	94.527	Echinops_telfairi
ENSEASG00005022835	SSB	96	47.959	ENSEBUG00000001237	ssb	96	48.214	Eptatretus_burgeri
ENSEASG00005022835	SSB	100	99.753	ENSECAG00000018495	SSB	100	99.753	Equus_caballus
ENSEASG00005022835	SSB	82	85.714	ENSEEUG00000008077	SSB	86	85.714	Erinaceus_europaeus
ENSEASG00005022835	SSB	98	60.050	ENSELUG00000020929	ssb	100	60.539	Esox_lucius
ENSEASG00005022835	SSB	100	96.552	ENSFCAG00000011601	SSB	100	96.552	Felis_catus
ENSEASG00005022835	SSB	100	75.921	ENSFALG00000000930	SSB	100	75.921	Ficedula_albicollis
ENSEASG00005022835	SSB	100	95.802	ENSFDAG00000000598	SSB	100	95.802	Fukomys_damarensis
ENSEASG00005022835	SSB	72	55.184	ENSFHEG00000003268	ssb	95	55.556	Fundulus_heteroclitus
ENSEASG00005022835	SSB	97	55.087	ENSGMOG00000002664	ssb	99	55.831	Gadus_morhua
ENSEASG00005022835	SSB	100	75.490	ENSGALG00000009677	SSB	100	75.490	Gallus_gallus
ENSEASG00005022835	SSB	99	56.404	ENSGAFG00000002749	ssb	100	56.650	Gambusia_affinis
ENSEASG00005022835	SSB	99	55.097	ENSGACG00000005107	ssb	100	55.448	Gasterosteus_aculeatus
ENSEASG00005022835	SSB	100	78.973	ENSGAGG00000007807	SSB	100	79.218	Gopherus_agassizii
ENSEASG00005022835	SSB	100	78.765	ENSGGOG00000024891	-	100	78.765	Gorilla_gorilla
ENSEASG00005022835	SSB	63	92.000	ENSGGOG00000023471	-	100	92.000	Gorilla_gorilla
ENSEASG00005022835	SSB	99	55.198	ENSHBUG00000006584	ssb	100	54.950	Haplochromis_burtoni
ENSEASG00005022835	SSB	100	87.715	ENSHGLG00000004478	-	100	87.715	Heterocephalus_glaber_female
ENSEASG00005022835	SSB	100	94.660	ENSHGLG00000017580	-	100	94.660	Heterocephalus_glaber_female
ENSEASG00005022835	SSB	100	86.667	ENSHGLG00000005832	-	100	86.667	Heterocephalus_glaber_female
ENSEASG00005022835	SSB	100	82.716	ENSHGLG00100008767	-	100	82.716	Heterocephalus_glaber_male
ENSEASG00005022835	SSB	100	94.660	ENSHGLG00100003084	-	100	94.660	Heterocephalus_glaber_male
ENSEASG00005022835	SSB	98	55.416	ENSHCOG00000019011	ssb	99	55.668	Hippocampus_comes
ENSEASG00005022835	SSB	97	58.458	ENSIPUG00000003681	SSB	99	58.911	Ictalurus_punctatus
ENSEASG00005022835	SSB	100	96.049	ENSSTOG00000008416	SSB	100	96.049	Ictidomys_tridecemlineatus
ENSEASG00005022835	SSB	99	69.154	ENSJJAG00000016250	-	99	69.154	Jaculus_jaculus
ENSEASG00005022835	SSB	99	80.952	ENSJJAG00000023158	-	99	80.952	Jaculus_jaculus
ENSEASG00005022835	SSB	99	56.404	ENSKMAG00000017317	ssb	100	56.897	Kryptolebias_marmoratus
ENSEASG00005022835	SSB	98	54.229	ENSLBEG00000017345	ssb	100	55.172	Labrus_bergylta
ENSEASG00005022835	SSB	99	66.830	ENSLACG00000014056	SSB	99	69.118	Latimeria_chalumnae
ENSEASG00005022835	SSB	98	67.332	ENSLOCG00000007933	ssb	99	67.830	Lepisosteus_oculatus
ENSEASG00005022835	SSB	100	79.506	ENSLAFG00000028909	-	100	79.506	Loxodonta_africana
ENSEASG00005022835	SSB	75	70.530	ENSLAFG00000026721	-	99	70.530	Loxodonta_africana
ENSEASG00005022835	SSB	100	86.493	ENSLAFG00000000867	-	100	89.336	Loxodonta_africana
ENSEASG00005022835	SSB	100	96.049	ENSMFAG00000039066	SSB	100	96.049	Macaca_fascicularis
ENSEASG00005022835	SSB	88	81.793	ENSMFAG00000041478	-	100	81.793	Macaca_fascicularis
ENSEASG00005022835	SSB	99	67.246	ENSMMUG00000039889	-	100	67.494	Macaca_mulatta
ENSEASG00005022835	SSB	100	80.741	ENSMMUG00000011724	-	97	80.741	Macaca_mulatta
ENSEASG00005022835	SSB	100	96.049	ENSMMUG00000023051	SSB	100	96.049	Macaca_mulatta
ENSEASG00005022835	SSB	100	83.415	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSEASG00005022835	SSB	88	81.793	ENSMNEG00000034698	-	100	81.793	Macaca_nemestrina
ENSEASG00005022835	SSB	100	68.148	ENSMLEG00000042644	-	100	68.148	Mandrillus_leucophaeus
ENSEASG00005022835	SSB	100	96.049	ENSMLEG00000035717	SSB	100	96.049	Mandrillus_leucophaeus
ENSEASG00005022835	SSB	99	58.867	ENSMAMG00000004800	ssb	100	59.360	Mastacembelus_armatus
ENSEASG00005022835	SSB	99	55.693	ENSMZEG00005005749	ssb	100	55.446	Maylandia_zebra
ENSEASG00005022835	SSB	100	75.490	ENSMGAG00000010328	SSB	99	77.073	Meleagris_gallopavo
ENSEASG00005022835	SSB	99	87.407	ENSMICG00000033304	-	98	87.887	Microcebus_murinus
ENSEASG00005022835	SSB	99	96.526	ENSMICG00000028252	-	99	96.526	Microcebus_murinus
ENSEASG00005022835	SSB	85	81.132	ENSMODG00000007027	-	99	81.132	Monodelphis_domestica
ENSEASG00005022835	SSB	100	79.036	ENSMODG00000008227	-	100	79.759	Monodelphis_domestica
ENSEASG00005022835	SSB	100	67.160	ENSMODG00000019271	-	100	67.160	Monodelphis_domestica
ENSEASG00005022835	SSB	90	58.583	ENSMALG00000008045	ssb	90	59.151	Monopterus_albus
ENSEASG00005022835	SSB	99	78.947	MGP_CAROLIEiJ_G0023629	-	100	92.935	Mus_caroli
ENSEASG00005022835	SSB	99	78.230	ENSMUSG00000068882	Ssb	100	92.935	Mus_musculus
ENSEASG00005022835	SSB	99	78.230	MGP_PahariEiJ_G0025081	-	100	92.935	Mus_pahari
ENSEASG00005022835	SSB	99	78.230	MGP_SPRETEiJ_G0024551	Ssb	100	92.935	Mus_spretus
ENSEASG00005022835	SSB	100	97.284	ENSMPUG00000000785	SSB	100	97.284	Mustela_putorius_furo
ENSEASG00005022835	SSB	100	91.667	ENSMLUG00000016316	SSB	100	91.667	Myotis_lucifugus
ENSEASG00005022835	SSB	99	55.693	ENSNBRG00000012661	ssb	100	55.446	Neolamprologus_brichardi
ENSEASG00005022835	SSB	100	68.719	ENSNLEG00000028754	-	100	69.212	Nomascus_leucogenys
ENSEASG00005022835	SSB	100	96.296	ENSNLEG00000004958	SSB	100	96.296	Nomascus_leucogenys
ENSEASG00005022835	SSB	61	88.710	ENSMEUG00000001650	-	100	88.710	Notamacropus_eugenii
ENSEASG00005022835	SSB	72	75.172	ENSOPRG00000008475	-	100	75.172	Ochotona_princeps
ENSEASG00005022835	SSB	93	89.947	ENSODEG00000004202	-	100	89.947	Octodon_degus
ENSEASG00005022835	SSB	99	55.198	ENSONIG00000008776	ssb	100	54.950	Oreochromis_niloticus
ENSEASG00005022835	SSB	99	85.075	ENSOANG00000008543	SSB	99	85.075	Ornithorhynchus_anatinus
ENSEASG00005022835	SSB	100	95.556	ENSOCUG00000010396	SSB	100	95.556	Oryctolagus_cuniculus
ENSEASG00005022835	SSB	99	58.128	ENSORLG00000017208	ssb	100	58.374	Oryzias_latipes
ENSEASG00005022835	SSB	99	58.374	ENSORLG00020022574	ssb	100	58.621	Oryzias_latipes_hni
ENSEASG00005022835	SSB	99	57.882	ENSORLG00015016592	ssb	100	58.128	Oryzias_latipes_hsok
ENSEASG00005022835	SSB	98	58.105	ENSOMEG00000003193	ssb	100	59.012	Oryzias_melastigma
ENSEASG00005022835	SSB	100	89.573	ENSOGAG00000029768	SSB	100	89.573	Otolemur_garnettii
ENSEASG00005022835	SSB	100	95.802	ENSOARG00000002906	SSB	100	95.802	Ovis_aries
ENSEASG00005022835	SSB	100	95.588	ENSPPAG00000042673	SSB	100	95.588	Pan_paniscus
ENSEASG00005022835	SSB	100	78.025	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSEASG00005022835	SSB	97	74.619	ENSPPAG00000006189	-	96	78.495	Pan_paniscus
ENSEASG00005022835	SSB	100	96.552	ENSPPRG00000006599	SSB	100	96.552	Panthera_pardus
ENSEASG00005022835	SSB	100	96.305	ENSPTIG00000011021	SSB	97	96.305	Panthera_tigris_altaica
ENSEASG00005022835	SSB	100	95.588	ENSPTRG00000012620	SSB	100	95.588	Pan_troglodytes
ENSEASG00005022835	SSB	100	74.321	ENSPTRG00000042880	-	100	74.321	Pan_troglodytes
ENSEASG00005022835	SSB	100	96.049	ENSPANG00000007440	SSB	100	96.049	Papio_anubis
ENSEASG00005022835	SSB	98	66.667	ENSPANG00000031877	-	95	66.667	Papio_anubis
ENSEASG00005022835	SSB	100	68.395	ENSPANG00000034126	-	100	68.889	Papio_anubis
ENSEASG00005022835	SSB	99	62.779	ENSPKIG00000019325	ssb	100	63.636	Paramormyrops_kingsleyae
ENSEASG00005022835	SSB	100	77.017	ENSPSIG00000002265	SSB	93	77.017	Pelodiscus_sinensis
ENSEASG00005022835	SSB	84	55.301	ENSPMGG00000020075	ssb	92	55.587	Periophthalmus_magnuspinnatus
ENSEASG00005022835	SSB	81	49.697	ENSPMAG00000002982	ssb	100	45.581	Petromyzon_marinus
ENSEASG00005022835	SSB	100	83.251	ENSPCIG00000028591	-	100	83.498	Phascolarctos_cinereus
ENSEASG00005022835	SSB	99	57.389	ENSPFOG00000009650	ssb	100	57.635	Poecilia_formosa
ENSEASG00005022835	SSB	99	57.143	ENSPLAG00000020498	ssb	100	57.389	Poecilia_latipinna
ENSEASG00005022835	SSB	99	56.897	ENSPMEG00000001051	ssb	100	57.389	Poecilia_mexicana
ENSEASG00005022835	SSB	92	57.937	ENSPREG00000003708	ssb	98	58.201	Poecilia_reticulata
ENSEASG00005022835	SSB	100	96.296	ENSPPYG00000012919	SSB	100	96.296	Pongo_abelii
ENSEASG00005022835	SSB	95	89.556	ENSPCAG00000010276	SSB	100	89.556	Procavia_capensis
ENSEASG00005022835	SSB	100	84.198	ENSPCOG00000023189	-	100	84.198	Propithecus_coquereli
ENSEASG00005022835	SSB	100	92.593	ENSPCOG00000015741	-	100	92.593	Propithecus_coquereli
ENSEASG00005022835	SSB	87	97.740	ENSPVAG00000006615	SSB	100	97.740	Pteropus_vampyrus
ENSEASG00005022835	SSB	99	55.693	ENSPNYG00000006444	ssb	100	55.446	Pundamilia_nyererei
ENSEASG00005022835	SSB	98	57.143	ENSPNAG00000011708	ssb	100	57.767	Pygocentrus_nattereri
ENSEASG00005022835	SSB	99	79.506	ENSRNOG00000011606	AABR07061825.1	99	79.506	Rattus_norvegicus
ENSEASG00005022835	SSB	99	78.947	ENSRNOG00000007998	Ssb	99	78.947	Rattus_norvegicus
ENSEASG00005022835	SSB	93	80.053	ENSRBIG00000041232	-	98	80.053	Rhinopithecus_bieti
ENSEASG00005022835	SSB	100	69.704	ENSRBIG00000029918	-	100	69.704	Rhinopithecus_bieti
ENSEASG00005022835	SSB	100	79.268	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSEASG00005022835	SSB	89	87.845	ENSRBIG00000041608	-	98	87.845	Rhinopithecus_bieti
ENSEASG00005022835	SSB	98	86.250	ENSRROG00000034102	-	98	86.181	Rhinopithecus_roxellana
ENSEASG00005022835	SSB	100	96.049	ENSRROG00000040346	SSB	100	96.049	Rhinopithecus_roxellana
ENSEASG00005022835	SSB	100	79.557	ENSRROG00000007149	-	100	79.557	Rhinopithecus_roxellana
ENSEASG00005022835	SSB	97	81.170	ENSRROG00000031684	-	99	81.170	Rhinopithecus_roxellana
ENSEASG00005022835	SSB	100	96.296	ENSSBOG00000027204	SSB	100	96.296	Saimiri_boliviensis_boliviensis
ENSEASG00005022835	SSB	100	83.251	ENSSHAG00000018062	SSB	100	83.498	Sarcophilus_harrisii
ENSEASG00005022835	SSB	99	64.619	ENSSFOG00015000550	ssb	99	65.111	Scleropages_formosus
ENSEASG00005022835	SSB	98	53.885	ENSSMAG00000013885	ssb	99	57.754	Scophthalmus_maximus
ENSEASG00005022835	SSB	99	57.882	ENSSDUG00000020117	ssb	100	57.882	Seriola_dumerili
ENSEASG00005022835	SSB	99	55.583	ENSSLDG00000002525	ssb	100	55.583	Seriola_lalandi_dorsalis
ENSEASG00005022835	SSB	95	87.206	ENSSARG00000007747	SSB	100	87.206	Sorex_araneus
ENSEASG00005022835	SSB	100	77.150	ENSSPUG00000012112	SSB	100	77.150	Sphenodon_punctatus
ENSEASG00005022835	SSB	98	55.970	ENSSPAG00000005696	ssb	100	56.650	Stegastes_partitus
ENSEASG00005022835	SSB	98	78.338	ENSSSCG00000015938	SSB	98	78.894	Sus_scrofa
ENSEASG00005022835	SSB	100	75.795	ENSTGUG00000007942	SSB	100	75.795	Taeniopygia_guttata
ENSEASG00005022835	SSB	99	57.426	ENSTRUG00000017839	ssb	100	58.025	Takifugu_rubripes
ENSEASG00005022835	SSB	90	59.783	ENSTNIG00000000915	ssb	100	59.783	Tetraodon_nigroviridis
ENSEASG00005022835	SSB	82	100.000	ENSTBEG00000009056	SSB	81	100.000	Tupaia_belangeri
ENSEASG00005022835	SSB	100	97.044	ENSTTRG00000002152	SSB	100	97.044	Tursiops_truncatus
ENSEASG00005022835	SSB	93	97.872	ENSUAMG00000027833	SSB	99	97.872	Ursus_americanus
ENSEASG00005022835	SSB	100	96.552	ENSUMAG00000013907	SSB	100	96.552	Ursus_maritimus
ENSEASG00005022835	SSB	100	96.296	ENSVPAG00000007183	SSB	100	96.296	Vicugna_pacos
ENSEASG00005022835	SSB	100	96.305	ENSVVUG00000016573	SSB	78	96.305	Vulpes_vulpes
ENSEASG00005022835	SSB	99	58.962	ENSXETG00000025402	ssb	99	60.941	Xenopus_tropicalis
ENSEASG00005022835	SSB	92	55.703	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSEASG00005022835	SSB	99	56.404	ENSXMAG00000004888	ssb	100	56.650	Xiphophorus_maculatus