EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005022982 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 8464 bases
Position: chrPSZQ01002455.1:8478989-8487452
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005033556	PseudoU_synth_2	PF00849.22	2.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005036582	RPUSD4-201	1547	-	ENSEASP00005033556	377 (aa)	-	UPI00071A540D

Gene Model

Click here to download ENSEASG00005022982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005022982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005022982	RPUSD4	71	32.056	ENSEASG00005014160	RPUSD3	76	32.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005022982	RPUSD4	100	82.228	ENSG00000165526	RPUSD4	100	82.228	Homo_sapiens
ENSEASG00005022982	RPUSD4	88	50.888	ENSAPOG00000011024	rpusd4	84	50.888	Acanthochromis_polyacanthus
ENSEASG00005022982	RPUSD4	100	85.411	ENSAMEG00000000127	-	100	85.411	Ailuropoda_melanoleuca
ENSEASG00005022982	RPUSD4	83	78.873	ENSAMEG00000005953	-	100	78.873	Ailuropoda_melanoleuca
ENSEASG00005022982	RPUSD4	83	49.057	ENSACIG00000003533	rpusd4	93	49.057	Amphilophus_citrinellus
ENSEASG00005022982	RPUSD4	90	50.291	ENSAOCG00000015409	rpusd4	85	50.291	Amphiprion_ocellaris
ENSEASG00005022982	RPUSD4	89	50.877	ENSAPEG00000018935	rpusd4	84	50.877	Amphiprion_percula
ENSEASG00005022982	RPUSD4	87	50.294	ENSATEG00000008059	rpusd4	84	50.294	Anabas_testudineus
ENSEASG00005022982	RPUSD4	73	59.498	ENSAPLG00000013250	RPUSD4	99	58.305	Anas_platyrhynchos
ENSEASG00005022982	RPUSD4	97	56.948	ENSACAG00000000189	RPUSD4	99	56.948	Anolis_carolinensis
ENSEASG00005022982	RPUSD4	98	81.671	ENSANAG00000024050	RPUSD4	99	81.671	Aotus_nancymaae
ENSEASG00005022982	RPUSD4	85	51.840	ENSACLG00000020996	rpusd4	83	51.840	Astatotilapia_calliptera
ENSEASG00005022982	RPUSD4	90	49.575	ENSAMXG00000031479	rpusd4	95	51.039	Astyanax_mexicanus
ENSEASG00005022982	RPUSD4	100	82.275	ENSBTAG00000020900	RPUSD4	100	82.275	Bos_taurus
ENSEASG00005022982	RPUSD4	98	81.622	ENSCJAG00000042850	RPUSD4	93	81.622	Callithrix_jacchus
ENSEASG00005022982	RPUSD4	100	84.392	ENSCAFG00000010488	RPUSD4	100	84.392	Canis_familiaris
ENSEASG00005022982	RPUSD4	100	84.392	ENSCAFG00020010621	RPUSD4	100	84.392	Canis_lupus_dingo
ENSEASG00005022982	RPUSD4	100	83.377	ENSCHIG00000009975	RPUSD4	100	83.377	Capra_hircus
ENSEASG00005022982	RPUSD4	100	86.207	ENSTSYG00000008456	RPUSD4	100	86.207	Carlito_syrichta
ENSEASG00005022982	RPUSD4	68	80.620	ENSCAPG00000006040	RPUSD4	100	80.620	Cavia_aperea
ENSEASG00005022982	RPUSD4	100	81.432	ENSCPOG00000014971	RPUSD4	100	81.432	Cavia_porcellus
ENSEASG00005022982	RPUSD4	98	82.210	ENSCCAG00000027838	RPUSD4	99	82.210	Cebus_capucinus
ENSEASG00005022982	RPUSD4	100	82.228	ENSCATG00000041570	RPUSD4	100	82.228	Cercocebus_atys
ENSEASG00005022982	RPUSD4	100	84.085	ENSCLAG00000016553	RPUSD4	100	84.085	Chinchilla_lanigera
ENSEASG00005022982	RPUSD4	100	82.228	ENSCSAG00000002274	RPUSD4	100	82.228	Chlorocebus_sabaeus
ENSEASG00005022982	RPUSD4	75	84.806	ENSCHOG00000010249	RPUSD4	100	84.806	Choloepus_hoffmanni
ENSEASG00005022982	RPUSD4	75	66.434	ENSCPBG00000011175	RPUSD4	99	66.434	Chrysemys_picta_bellii
ENSEASG00005022982	RPUSD4	71	42.446	ENSCSAVG00000000872	-	54	42.446	Ciona_savignyi
ENSEASG00005022982	RPUSD4	100	80.637	ENSCANG00000039684	RPUSD4	100	80.637	Colobus_angolensis_palliatus
ENSEASG00005022982	RPUSD4	100	81.698	ENSCGRG00001024141	Rpusd4	100	81.698	Cricetulus_griseus_chok1gshd
ENSEASG00005022982	RPUSD4	100	81.698	ENSCGRG00000014415	Rpusd4	100	81.698	Cricetulus_griseus_crigri
ENSEASG00005022982	RPUSD4	88	50.445	ENSCVAG00000000392	rpusd4	95	50.445	Cyprinodon_variegatus
ENSEASG00005022982	RPUSD4	88	50.148	ENSCVAG00000008761	rpusd4	86	50.148	Cyprinodon_variegatus
ENSEASG00005022982	RPUSD4	85	51.077	ENSDARG00000012674	rpusd4	91	51.077	Danio_rerio
ENSEASG00005022982	RPUSD4	100	80.902	ENSDNOG00000020026	RPUSD4	100	80.902	Dasypus_novemcinctus
ENSEASG00005022982	RPUSD4	100	82.759	ENSDORG00000016717	Rpusd4	100	82.759	Dipodomys_ordii
ENSEASG00005022982	RPUSD4	99	83.155	ENSETEG00000013953	RPUSD4	99	83.155	Echinops_telfairi
ENSEASG00005022982	RPUSD4	100	98.408	ENSECAG00000000557	RPUSD4	100	98.408	Equus_caballus
ENSEASG00005022982	RPUSD4	81	82.796	ENSEEUG00000014036	RPUSD4	81	82.796	Erinaceus_europaeus
ENSEASG00005022982	RPUSD4	88	53.913	ENSELUG00000008075	rpusd4	89	53.913	Esox_lucius
ENSEASG00005022982	RPUSD4	100	84.615	ENSFCAG00000029789	RPUSD4	100	84.615	Felis_catus
ENSEASG00005022982	RPUSD4	88	57.530	ENSFALG00000005171	RPUSD4	98	57.530	Ficedula_albicollis
ENSEASG00005022982	RPUSD4	100	82.759	ENSFDAG00000014307	RPUSD4	100	82.759	Fukomys_damarensis
ENSEASG00005022982	RPUSD4	88	50.742	ENSFHEG00000004329	rpusd4	86	50.742	Fundulus_heteroclitus
ENSEASG00005022982	RPUSD4	85	50.920	ENSGMOG00000017726	rpusd4	99	50.147	Gadus_morhua
ENSEASG00005022982	RPUSD4	74	62.411	ENSGALG00000024326	RPUSD4	98	56.438	Gallus_gallus
ENSEASG00005022982	RPUSD4	91	46.591	ENSGAFG00000021559	rpusd4	89	46.591	Gambusia_affinis
ENSEASG00005022982	RPUSD4	88	49.558	ENSGACG00000001657	rpusd4	100	50.000	Gasterosteus_aculeatus
ENSEASG00005022982	RPUSD4	92	60.519	ENSGAGG00000000132	RPUSD4	96	60.519	Gopherus_agassizii
ENSEASG00005022982	RPUSD4	100	83.024	ENSGGOG00000016494	RPUSD4	100	83.024	Gorilla_gorilla
ENSEASG00005022982	RPUSD4	85	51.840	ENSHBUG00000022838	rpusd4	83	51.840	Haplochromis_burtoni
ENSEASG00005022982	RPUSD4	100	83.554	ENSHGLG00000002285	RPUSD4	100	83.554	Heterocephalus_glaber_female
ENSEASG00005022982	RPUSD4	100	83.554	ENSHGLG00100006385	RPUSD4	100	83.554	Heterocephalus_glaber_male
ENSEASG00005022982	RPUSD4	86	50.915	ENSHCOG00000006612	rpusd4	83	50.915	Hippocampus_comes
ENSEASG00005022982	RPUSD4	90	52.339	ENSIPUG00000023879	rusd4	88	52.339	Ictalurus_punctatus
ENSEASG00005022982	RPUSD4	97	85.714	ENSSTOG00000025280	RPUSD4	100	85.714	Ictidomys_tridecemlineatus
ENSEASG00005022982	RPUSD4	98	84.906	ENSJJAG00000018673	Rpusd4	99	84.906	Jaculus_jaculus
ENSEASG00005022982	RPUSD4	89	51.176	ENSKMAG00000021805	rpusd4	88	51.176	Kryptolebias_marmoratus
ENSEASG00005022982	RPUSD4	86	51.829	ENSLBEG00000020394	rpusd4	91	51.829	Labrus_bergylta
ENSEASG00005022982	RPUSD4	85	61.963	ENSLACG00000011028	RPUSD4	85	60.767	Latimeria_chalumnae
ENSEASG00005022982	RPUSD4	85	47.531	ENSLOCG00000003124	rpusd4	86	47.531	Lepisosteus_oculatus
ENSEASG00005022982	RPUSD4	100	83.862	ENSLAFG00000005211	RPUSD4	100	83.862	Loxodonta_africana
ENSEASG00005022982	RPUSD4	100	82.228	ENSMFAG00000039513	RPUSD4	100	82.228	Macaca_fascicularis
ENSEASG00005022982	RPUSD4	100	81.963	ENSMMUG00000007933	RPUSD4	100	81.963	Macaca_mulatta
ENSEASG00005022982	RPUSD4	100	81.963	ENSMNEG00000027414	RPUSD4	100	81.963	Macaca_nemestrina
ENSEASG00005022982	RPUSD4	100	81.698	ENSMLEG00000042461	RPUSD4	100	81.698	Mandrillus_leucophaeus
ENSEASG00005022982	RPUSD4	88	49.704	ENSMAMG00000023839	rpusd4	86	49.704	Mastacembelus_armatus
ENSEASG00005022982	RPUSD4	85	51.840	ENSMZEG00005011999	rpusd4	83	51.840	Maylandia_zebra
ENSEASG00005022982	RPUSD4	74	61.071	ENSMGAG00000000840	RPUSD4	99	58.642	Meleagris_gallopavo
ENSEASG00005022982	RPUSD4	100	80.371	ENSMAUG00000010280	Rpusd4	100	80.371	Mesocricetus_auratus
ENSEASG00005022982	RPUSD4	100	85.411	ENSMICG00000015979	RPUSD4	100	85.411	Microcebus_murinus
ENSEASG00005022982	RPUSD4	100	78.780	ENSMOCG00000000661	Rpusd4	100	78.780	Microtus_ochrogaster
ENSEASG00005022982	RPUSD4	81	54.341	ENSMMOG00000021731	rpusd4	92	54.341	Mola_mola
ENSEASG00005022982	RPUSD4	92	72.622	ENSMODG00000004521	RPUSD4	89	72.622	Monodelphis_domestica
ENSEASG00005022982	RPUSD4	79	52.961	ENSMALG00000005839	rpusd4	96	51.562	Monopterus_albus
ENSEASG00005022982	RPUSD4	100	79.310	MGP_CAROLIEiJ_G0031954	Rpusd4	100	79.310	Mus_caroli
ENSEASG00005022982	RPUSD4	100	79.310	ENSMUSG00000032044	Rpusd4	100	79.310	Mus_musculus
ENSEASG00005022982	RPUSD4	100	80.637	MGP_PahariEiJ_G0014819	Rpusd4	100	80.637	Mus_pahari
ENSEASG00005022982	RPUSD4	100	79.045	MGP_SPRETEiJ_G0033078	Rpusd4	100	79.045	Mus_spretus
ENSEASG00005022982	RPUSD4	99	82.133	ENSMPUG00000006608	RPUSD4	99	82.133	Mustela_putorius_furo
ENSEASG00005022982	RPUSD4	67	87.402	ENSMLUG00000029348	-	100	87.402	Myotis_lucifugus
ENSEASG00005022982	RPUSD4	90	87.719	ENSMLUG00000017328	-	97	84.741	Myotis_lucifugus
ENSEASG00005022982	RPUSD4	99	82.527	ENSNGAG00000020847	Rpusd4	99	82.527	Nannospalax_galili
ENSEASG00005022982	RPUSD4	85	52.147	ENSNBRG00000005207	rpusd4	94	52.147	Neolamprologus_brichardi
ENSEASG00005022982	RPUSD4	100	82.759	ENSNLEG00000007465	RPUSD4	100	82.759	Nomascus_leucogenys
ENSEASG00005022982	RPUSD4	98	69.919	ENSMEUG00000004370	RPUSD4	99	69.919	Notamacropus_eugenii
ENSEASG00005022982	RPUSD4	70	62.642	ENSOPRG00000013141	-	100	62.642	Ochotona_princeps
ENSEASG00005022982	RPUSD4	100	82.228	ENSODEG00000004577	RPUSD4	100	82.228	Octodon_degus
ENSEASG00005022982	RPUSD4	93	49.304	ENSONIG00000018879	rpusd4	95	49.304	Oreochromis_niloticus
ENSEASG00005022982	RPUSD4	77	66.780	ENSOANG00000007247	RPUSD4	97	65.677	Ornithorhynchus_anatinus
ENSEASG00005022982	RPUSD4	99	82.620	ENSOCUG00000017039	RPUSD4	99	82.620	Oryctolagus_cuniculus
ENSEASG00005022982	RPUSD4	88	49.851	ENSORLG00000002750	rpusd4	92	49.704	Oryzias_latipes
ENSEASG00005022982	RPUSD4	89	49.558	ENSORLG00020002044	rpusd4	73	53.741	Oryzias_latipes_hni
ENSEASG00005022982	RPUSD4	85	50.769	ENSORLG00015020034	rpusd4	81	50.769	Oryzias_latipes_hsok
ENSEASG00005022982	RPUSD4	84	52.941	ENSOMEG00000004861	rpusd4	79	52.941	Oryzias_melastigma
ENSEASG00005022982	RPUSD4	100	82.804	ENSOGAG00000008922	RPUSD4	100	82.804	Otolemur_garnettii
ENSEASG00005022982	RPUSD4	98	83.514	ENSOARG00000012238	RPUSD4	99	83.069	Ovis_aries
ENSEASG00005022982	RPUSD4	100	82.493	ENSPPAG00000042883	RPUSD4	93	82.493	Pan_paniscus
ENSEASG00005022982	RPUSD4	100	84.350	ENSPPRG00000003081	RPUSD4	100	84.350	Panthera_pardus
ENSEASG00005022982	RPUSD4	100	84.350	ENSPTIG00000012059	RPUSD4	100	84.350	Panthera_tigris_altaica
ENSEASG00005022982	RPUSD4	100	82.228	ENSPTRG00000004454	RPUSD4	100	82.228	Pan_troglodytes
ENSEASG00005022982	RPUSD4	100	81.963	ENSPANG00000015040	RPUSD4	100	81.963	Papio_anubis
ENSEASG00005022982	RPUSD4	89	56.805	ENSPKIG00000023986	rpusd4	86	56.805	Paramormyrops_kingsleyae
ENSEASG00005022982	RPUSD4	79	65.667	ENSPSIG00000014268	RPUSD4	95	65.667	Pelodiscus_sinensis
ENSEASG00005022982	RPUSD4	86	49.848	ENSPMGG00000002806	rpusd4	91	49.695	Periophthalmus_magnuspinnatus
ENSEASG00005022982	RPUSD4	100	74.271	ENSPEMG00000000278	Rpusd4	100	74.271	Peromyscus_maniculatus_bairdii
ENSEASG00005022982	RPUSD4	80	45.808	ENSPMAG00000008183	rpusd4	97	45.808	Petromyzon_marinus
ENSEASG00005022982	RPUSD4	97	72.527	ENSPCIG00000010212	RPUSD4	100	72.527	Phascolarctos_cinereus
ENSEASG00005022982	RPUSD4	90	48.295	ENSPFOG00000019030	rpusd4	91	48.295	Poecilia_formosa
ENSEASG00005022982	RPUSD4	90	48.857	ENSPLAG00000016848	rpusd4	88	48.857	Poecilia_latipinna
ENSEASG00005022982	RPUSD4	90	47.714	ENSPMEG00000017534	rpusd4	88	47.714	Poecilia_mexicana
ENSEASG00005022982	RPUSD4	86	48.665	ENSPREG00000005689	rpusd4	87	48.665	Poecilia_reticulata
ENSEASG00005022982	RPUSD4	100	83.820	ENSPPYG00000004043	RPUSD4	100	83.820	Pongo_abelii
ENSEASG00005022982	RPUSD4	80	80.978	ENSPCAG00000000753	RPUSD4	81	80.978	Procavia_capensis
ENSEASG00005022982	RPUSD4	98	79.515	ENSPCOG00000020694	RPUSD4	100	79.515	Propithecus_coquereli
ENSEASG00005022982	RPUSD4	100	86.207	ENSPVAG00000000988	RPUSD4	100	86.207	Pteropus_vampyrus
ENSEASG00005022982	RPUSD4	85	50.613	ENSPNYG00000009652	rpusd4	83	50.613	Pundamilia_nyererei
ENSEASG00005022982	RPUSD4	96	49.863	ENSPNAG00000012264	rpusd4	95	49.863	Pygocentrus_nattereri
ENSEASG00005022982	RPUSD4	100	80.637	ENSRNOG00000011567	Rpusd4	100	80.637	Rattus_norvegicus
ENSEASG00005022982	RPUSD4	100	82.228	ENSRBIG00000034842	RPUSD4	100	82.228	Rhinopithecus_bieti
ENSEASG00005022982	RPUSD4	100	82.228	ENSRROG00000039753	RPUSD4	100	82.228	Rhinopithecus_roxellana
ENSEASG00005022982	RPUSD4	98	81.132	ENSSBOG00000030413	RPUSD4	99	81.132	Saimiri_boliviensis_boliviensis
ENSEASG00005022982	RPUSD4	80	76.080	ENSSHAG00000008304	RPUSD4	99	76.080	Sarcophilus_harrisii
ENSEASG00005022982	RPUSD4	90	55.491	ENSSFOG00015006203	rpusd4	93	55.491	Scleropages_formosus
ENSEASG00005022982	RPUSD4	88	50.445	ENSSMAG00000020978	rpusd4	87	50.909	Scophthalmus_maximus
ENSEASG00005022982	RPUSD4	84	50.155	ENSSDUG00000013399	rpusd4	84	50.155	Seriola_dumerili
ENSEASG00005022982	RPUSD4	94	47.059	ENSSLDG00000023507	rpusd4	98	47.059	Seriola_lalandi_dorsalis
ENSEASG00005022982	RPUSD4	88	62.500	ENSSPUG00000001401	RPUSD4	92	63.095	Sphenodon_punctatus
ENSEASG00005022982	RPUSD4	90	52.035	ENSSPAG00000012163	rpusd4	88	52.035	Stegastes_partitus
ENSEASG00005022982	RPUSD4	100	86.207	ENSSSCG00000015233	RPUSD4	100	86.207	Sus_scrofa
ENSEASG00005022982	RPUSD4	79	59.000	ENSTGUG00000000773	RPUSD4	100	59.000	Taeniopygia_guttata
ENSEASG00005022982	RPUSD4	86	50.456	ENSTRUG00000012283	rpusd4	84	50.456	Takifugu_rubripes
ENSEASG00005022982	RPUSD4	90	49.422	ENSTNIG00000014676	rpusd4	88	49.422	Tetraodon_nigroviridis
ENSEASG00005022982	RPUSD4	100	84.350	ENSTTRG00000001555	RPUSD4	100	84.350	Tursiops_truncatus
ENSEASG00005022982	RPUSD4	100	84.881	ENSUMAG00000002219	RPUSD4	100	84.881	Ursus_maritimus
ENSEASG00005022982	RPUSD4	70	86.038	ENSVPAG00000001066	RPUSD4	100	86.038	Vicugna_pacos
ENSEASG00005022982	RPUSD4	100	83.862	ENSVVUG00000020101	RPUSD4	100	83.862	Vulpes_vulpes
ENSEASG00005022982	RPUSD4	91	48.011	ENSXCOG00000004676	rpusd4	91	47.727	Xiphophorus_couchianus
ENSEASG00005022982	RPUSD4	91	48.011	ENSXMAG00000023351	rpusd4	89	48.011	Xiphophorus_maculatus