EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005023019 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Plus strand
Length: 35477 bases
Position: chrPSZQ01005192.1:3727611-3763087
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005033645	RRM_5	PF13893.6	8e-07	1	1
ENSEASP00005033641	RRM_5	PF13893.6	8.5e-07	1	1
ENSEASP00005033657	RRM_1	PF00076.22	4.9e-13	1	1
ENSEASP00005033641	RRM_1	PF00076.22	4.9e-13	1	1
ENSEASP00005033650	RRM_1	PF00076.22	4.9e-13	1	1
ENSEASP00005033658	RRM_1	PF00076.22	4.9e-13	1	1
ENSEASP00005033645	RRM_1	PF00076.22	5e-13	1	1
ENSEASP00005033638	RRM_1	PF00076.22	5.4e-13	1	1
ENSEASP00005033645	SAP	PF02037.27	1.3e-10	1	1
ENSEASP00005033650	SAP	PF02037.27	1.5e-10	1	1
ENSEASP00005033641	SAP	PF02037.27	1.5e-10	1	1
ENSEASP00005033638	SAP	PF02037.27	1.7e-10	1	1
ENSEASP00005033657	SAP	PF02037.27	8.2e-10	1	1
ENSEASP00005033658	SAP	PF02037.27	8.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005036678	SAFB-202	2769	-	ENSEASP00005033641	922 (aa)	-	-
ENSEAST00005036682	SAFB-203	2766	-	ENSEASP00005033645	921 (aa)	-	-
ENSEAST00005036687	SAFB-204	2745	-	ENSEASP00005033650	914 (aa)	-	-
ENSEAST00005036694	SAFB-205	2682	-	ENSEASP00005033657	893 (aa)	-	-
ENSEAST00005036695	SAFB-206	2679	-	ENSEASP00005033658	892 (aa)	-	-
ENSEAST00005036675	SAFB-201	2931	-	ENSEASP00005033638	976 (aa)	-	-

Gene Model

Click here to download ENSEASG00005023019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005023019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005023019	SAFB	85	67.442	ENSEASG00005022952	SAFB2	85	67.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005023019	SAFB	100	88.829	ENSG00000160633	SAFB	100	88.829	Homo_sapiens
ENSEASG00005023019	SAFB	88	44.706	ENSAPOG00000022508	safb	64	43.311	Acanthochromis_polyacanthus
ENSEASG00005023019	SAFB	100	90.270	ENSAMEG00000012254	SAFB	98	89.456	Ailuropoda_melanoleuca
ENSEASG00005023019	SAFB	97	39.957	ENSACIG00000006247	safb	70	39.864	Amphilophus_citrinellus
ENSEASG00005023019	SAFB	93	43.645	ENSAOCG00000006308	safb	68	43.719	Amphiprion_ocellaris
ENSEASG00005023019	SAFB	88	44.301	ENSAPEG00000023342	safb	64	42.738	Amphiprion_percula
ENSEASG00005023019	SAFB	95	42.873	ENSATEG00000004998	safb	64	40.000	Anabas_testudineus
ENSEASG00005023019	SAFB	89	61.684	ENSAPLG00000006355	-	99	61.566	Anas_platyrhynchos
ENSEASG00005023019	SAFB	93	64.032	ENSAPLG00000005780	-	100	62.113	Anas_platyrhynchos
ENSEASG00005023019	SAFB	100	89.371	ENSANAG00000028821	SAFB	100	88.720	Aotus_nancymaae
ENSEASG00005023019	SAFB	95	42.967	ENSACLG00000001926	safb	62	43.960	Astatotilapia_calliptera
ENSEASG00005023019	SAFB	92	42.232	ENSAMXG00000018154	safb	62	44.202	Astyanax_mexicanus
ENSEASG00005023019	SAFB	100	84.490	ENSBTAG00000007875	SAFB	100	85.792	Bos_taurus
ENSEASG00005023019	SAFB	88	86.933	ENSCJAG00000017081	SAFB	100	92.764	Callithrix_jacchus
ENSEASG00005023019	SAFB	100	89.924	ENSCAFG00000018803	SAFB	92	89.744	Canis_familiaris
ENSEASG00005023019	SAFB	100	91.008	ENSCAFG00020018943	SAFB	100	90.466	Canis_lupus_dingo
ENSEASG00005023019	SAFB	100	83.297	ENSCHIG00000007262	SAFB	100	84.599	Capra_hircus
ENSEASG00005023019	SAFB	58	79.104	ENSTSYG00000001851	-	53	93.333	Carlito_syrichta
ENSEASG00005023019	SAFB	79	81.095	ENSCAPG00000012121	SAFB	94	79.820	Cavia_aperea
ENSEASG00005023019	SAFB	100	84.161	ENSCPOG00000026322	SAFB	100	84.794	Cavia_porcellus
ENSEASG00005023019	SAFB	100	89.491	ENSCCAG00000020193	SAFB	100	88.624	Cebus_capucinus
ENSEASG00005023019	SAFB	100	89.154	ENSCATG00000029994	SAFB	100	89.154	Cercocebus_atys
ENSEASG00005023019	SAFB	100	85.547	ENSCLAG00000007734	SAFB	100	85.122	Chinchilla_lanigera
ENSEASG00005023019	SAFB	100	89.046	ENSCSAG00000009949	SAFB	100	89.046	Chlorocebus_sabaeus
ENSEASG00005023019	SAFB	87	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSEASG00005023019	SAFB	91	62.588	ENSCPBG00000010928	-	99	60.849	Chrysemys_picta_bellii
ENSEASG00005023019	SAFB	91	59.101	ENSCPBG00000010936	-	99	58.043	Chrysemys_picta_bellii
ENSEASG00005023019	SAFB	100	83.514	ENSCANG00000019754	-	100	83.080	Colobus_angolensis_palliatus
ENSEASG00005023019	SAFB	97	88.636	ENSCANG00000004774	-	100	88.479	Colobus_angolensis_palliatus
ENSEASG00005023019	SAFB	100	81.780	ENSCGRG00001002254	Safb	100	82.309	Cricetulus_griseus_chok1gshd
ENSEASG00005023019	SAFB	90	79.157	ENSCGRG00000011529	Safb	96	79.954	Cricetulus_griseus_crigri
ENSEASG00005023019	SAFB	97	39.867	ENSCSEG00000019870	safb	65	38.014	Cynoglossus_semilaevis
ENSEASG00005023019	SAFB	91	51.969	ENSCVAG00000002226	safb	64	36.410	Cyprinodon_variegatus
ENSEASG00005023019	SAFB	89	43.503	ENSDARG00000020467	safb	60	57.500	Danio_rerio
ENSEASG00005023019	SAFB	100	86.364	ENSDNOG00000015746	SAFB	95	85.152	Dasypus_novemcinctus
ENSEASG00005023019	SAFB	98	79.720	ENSDORG00000016200	Safb	100	80.611	Dipodomys_ordii
ENSEASG00005023019	SAFB	81	85.612	ENSETEG00000018679	SAFB	75	85.827	Echinops_telfairi
ENSEASG00005023019	SAFB	100	98.373	ENSECAG00000018659	SAFB	94	96.917	Equus_caballus
ENSEASG00005023019	SAFB	97	43.083	ENSELUG00000022327	safb	69	50.000	Esox_lucius
ENSEASG00005023019	SAFB	100	89.924	ENSFCAG00000011835	SAFB	100	90.683	Felis_catus
ENSEASG00005023019	SAFB	91	58.512	ENSFALG00000013881	-	99	58.923	Ficedula_albicollis
ENSEASG00005023019	SAFB	100	64.385	ENSFALG00000013882	-	89	63.385	Ficedula_albicollis
ENSEASG00005023019	SAFB	95	80.513	ENSFDAG00000020306	SAFB	100	82.261	Fukomys_damarensis
ENSEASG00005023019	SAFB	74	55.556	ENSFHEG00000004219	safb	64	53.543	Fundulus_heteroclitus
ENSEASG00005023019	SAFB	61	45.246	ENSGMOG00000014280	safb	63	40.449	Gadus_morhua
ENSEASG00005023019	SAFB	100	58.684	ENSGALG00000001948	-	97	61.082	Gallus_gallus
ENSEASG00005023019	SAFB	100	64.026	ENSGALG00000013365	-	97	63.234	Gallus_gallus
ENSEASG00005023019	SAFB	97	38.972	ENSGAFG00000016162	safb	65	36.170	Gambusia_affinis
ENSEASG00005023019	SAFB	97	40.764	ENSGACG00000011385	safb	64	41.983	Gasterosteus_aculeatus
ENSEASG00005023019	SAFB	98	57.595	ENSGAGG00000008424	-	97	59.844	Gopherus_agassizii
ENSEASG00005023019	SAFB	75	56.889	ENSGAGG00000017702	-	100	56.006	Gopherus_agassizii
ENSEASG00005023019	SAFB	100	89.262	ENSGGOG00000015109	SAFB	100	88.612	Gorilla_gorilla
ENSEASG00005023019	SAFB	97	40.132	ENSHBUG00000009218	safb	67	41.653	Haplochromis_burtoni
ENSEASG00005023019	SAFB	100	85.410	ENSHGLG00000015883	SAFB	100	85.942	Heterocephalus_glaber_female
ENSEASG00005023019	SAFB	87	92.118	ENSHGLG00100004228	SAFB	77	83.792	Heterocephalus_glaber_male
ENSEASG00005023019	SAFB	91	35.950	ENSHCOG00000001705	safb	59	36.293	Hippocampus_comes
ENSEASG00005023019	SAFB	58	50.743	ENSIPUG00000024869	safb2	63	45.531	Ictalurus_punctatus
ENSEASG00005023019	SAFB	93	87.771	ENSSTOG00000002783	SAFB	100	87.200	Ictidomys_tridecemlineatus
ENSEASG00005023019	SAFB	100	82.241	ENSJJAG00000009021	Safb	100	83.192	Jaculus_jaculus
ENSEASG00005023019	SAFB	97	42.476	ENSLBEG00000006015	safb	63	44.426	Labrus_bergylta
ENSEASG00005023019	SAFB	64	51.216	ENSLACG00000018090	SAFB	66	52.412	Latimeria_chalumnae
ENSEASG00005023019	SAFB	97	46.745	ENSLOCG00000003613	safb	74	46.202	Lepisosteus_oculatus
ENSEASG00005023019	SAFB	99	86.039	ENSLAFG00000003840	SAFB	100	85.173	Loxodonta_africana
ENSEASG00005023019	SAFB	100	89.057	ENSMFAG00000003885	SAFB	100	88.841	Macaca_fascicularis
ENSEASG00005023019	SAFB	100	89.274	ENSMMUG00000017970	SAFB	100	89.154	Macaca_mulatta
ENSEASG00005023019	SAFB	100	86.457	ENSMNEG00000035637	SAFB	100	86.241	Macaca_nemestrina
ENSEASG00005023019	SAFB	100	84.341	ENSMLEG00000038637	SAFB	100	84.341	Mandrillus_leucophaeus
ENSEASG00005023019	SAFB	95	42.304	ENSMAMG00000003357	safb	59	41.475	Mastacembelus_armatus
ENSEASG00005023019	SAFB	95	43.077	ENSMZEG00005009120	safb	65	43.212	Maylandia_zebra
ENSEASG00005023019	SAFB	89	58.034	ENSMGAG00000001051	-	96	59.625	Meleagris_gallopavo
ENSEASG00005023019	SAFB	97	62.348	ENSMGAG00000001101	-	97	61.998	Meleagris_gallopavo
ENSEASG00005023019	SAFB	53	91.616	ENSMAUG00000005013	Safb	100	91.207	Mesocricetus_auratus
ENSEASG00005023019	SAFB	85	76.815	ENSMICG00000046795	-	98	91.489	Microcebus_murinus
ENSEASG00005023019	SAFB	100	86.364	ENSMICG00000008739	-	100	85.606	Microcebus_murinus
ENSEASG00005023019	SAFB	100	82.097	ENSMOCG00000014040	Safb	100	82.839	Microtus_ochrogaster
ENSEASG00005023019	SAFB	100	72.516	ENSMODG00000001236	SAFB	98	72.017	Monodelphis_domestica
ENSEASG00005023019	SAFB	93	42.729	ENSMALG00000020330	safb	68	41.556	Monopterus_albus
ENSEASG00005023019	SAFB	100	81.481	MGP_CAROLIEiJ_G0021780	Safb	100	82.434	Mus_caroli
ENSEASG00005023019	SAFB	100	81.587	ENSMUSG00000071054	Safb	100	82.540	Mus_musculus
ENSEASG00005023019	SAFB	100	81.184	MGP_PahariEiJ_G0020769	Safb	100	82.135	Mus_pahari
ENSEASG00005023019	SAFB	100	90.141	ENSMPUG00000006123	SAFB	99	89.344	Mustela_putorius_furo
ENSEASG00005023019	SAFB	100	88.949	ENSMLUG00000001081	SAFB	100	88.299	Myotis_lucifugus
ENSEASG00005023019	SAFB	100	80.253	ENSNGAG00000019882	Safb	100	80.465	Nannospalax_galili
ENSEASG00005023019	SAFB	96	89.480	ENSNLEG00000013551	SAFB	100	88.575	Nomascus_leucogenys
ENSEASG00005023019	SAFB	89	81.197	ENSOPRG00000011561	-	100	81.441	Ochotona_princeps
ENSEASG00005023019	SAFB	100	85.881	ENSODEG00000014838	SAFB	100	86.624	Octodon_degus
ENSEASG00005023019	SAFB	95	42.358	ENSONIG00000002318	safb	64	42.881	Oreochromis_niloticus
ENSEASG00005023019	SAFB	90	77.871	ENSOCUG00000014628	SAFB	63	80.000	Oryctolagus_cuniculus
ENSEASG00005023019	SAFB	95	39.608	ENSOMEG00000009066	safb	65	38.898	Oryzias_melastigma
ENSEASG00005023019	SAFB	100	84.483	ENSOGAG00000027769	SAFB	100	83.944	Otolemur_garnettii
ENSEASG00005023019	SAFB	100	82.990	ENSOARG00000007662	-	100	81.996	Ovis_aries
ENSEASG00005023019	SAFB	78	79.387	ENSOARG00000007856	-	100	78.691	Ovis_aries
ENSEASG00005023019	SAFB	100	88.624	ENSPPAG00000035129	SAFB	100	88.407	Pan_paniscus
ENSEASG00005023019	SAFB	100	89.924	ENSPPRG00000017197	SAFB	100	90.683	Panthera_pardus
ENSEASG00005023019	SAFB	100	88.624	ENSPTRG00000010335	SAFB	100	88.407	Pan_troglodytes
ENSEASG00005023019	SAFB	100	89.599	ENSPANG00000007770	SAFB	100	88.732	Papio_anubis
ENSEASG00005023019	SAFB	95	42.628	ENSPKIG00000009902	safb	66	43.871	Paramormyrops_kingsleyae
ENSEASG00005023019	SAFB	99	60.105	ENSPSIG00000009367	-	64	58.251	Pelodiscus_sinensis
ENSEASG00005023019	SAFB	100	59.791	ENSPSIG00000011679	-	99	60.473	Pelodiscus_sinensis
ENSEASG00005023019	SAFB	100	83.227	ENSPEMG00000020428	Safb	100	83.970	Peromyscus_maniculatus_bairdii
ENSEASG00005023019	SAFB	58	79.779	ENSPCIG00000009504	-	99	79.042	Phascolarctos_cinereus
ENSEASG00005023019	SAFB	97	38.654	ENSPFOG00000007745	safb	72	40.864	Poecilia_formosa
ENSEASG00005023019	SAFB	96	37.447	ENSPLAG00000001614	safb	66	38.934	Poecilia_latipinna
ENSEASG00005023019	SAFB	97	38.654	ENSPMEG00000021023	safb	56	53.668	Poecilia_mexicana
ENSEASG00005023019	SAFB	97	37.307	ENSPREG00000012496	safb	65	40.367	Poecilia_reticulata
ENSEASG00005023019	SAFB	100	88.829	ENSPPYG00000009428	SAFB	100	88.612	Pongo_abelii
ENSEASG00005023019	SAFB	100	82.651	ENSPCAG00000006475	SAFB	100	81.789	Procavia_capensis
ENSEASG00005023019	SAFB	100	83.603	ENSPCOG00000014090	SAFB	100	81.769	Propithecus_coquereli
ENSEASG00005023019	SAFB	100	82.792	ENSPVAG00000004913	SAFB	100	82.684	Pteropus_vampyrus
ENSEASG00005023019	SAFB	97	43.102	ENSPNAG00000021838	safb	64	45.380	Pygocentrus_nattereri
ENSEASG00005023019	SAFB	100	81.013	ENSRNOG00000050543	Safb	100	81.224	Rattus_norvegicus
ENSEASG00005023019	SAFB	100	77.790	ENSRBIG00000042509	SAFB	88	93.548	Rhinopithecus_bieti
ENSEASG00005023019	SAFB	100	89.057	ENSRROG00000029278	SAFB	100	88.841	Rhinopithecus_roxellana
ENSEASG00005023019	SAFB	100	89.588	ENSSBOG00000026291	SAFB	100	88.937	Saimiri_boliviensis_boliviensis
ENSEASG00005023019	SAFB	97	44.632	ENSSFOG00015008156	safb	65	45.645	Scleropages_formosus
ENSEASG00005023019	SAFB	97	41.987	ENSSMAG00000009316	safb	64	43.729	Scophthalmus_maximus
ENSEASG00005023019	SAFB	97	41.540	ENSSDUG00000009652	safb	68	42.044	Seriola_dumerili
ENSEASG00005023019	SAFB	97	42.888	ENSSLDG00000001670	safb	64	42.219	Seriola_lalandi_dorsalis
ENSEASG00005023019	SAFB	93	82.811	ENSSARG00000010475	SAFB	100	82.114	Sorex_araneus
ENSEASG00005023019	SAFB	84	53.301	ENSSPUG00000009820	-	99	58.437	Sphenodon_punctatus
ENSEASG00005023019	SAFB	89	54.202	ENSSPUG00000009747	-	67	55.094	Sphenodon_punctatus
ENSEASG00005023019	SAFB	93	41.339	ENSSPAG00000015682	safb	68	40.948	Stegastes_partitus
ENSEASG00005023019	SAFB	100	90.011	ENSSSCG00000013522	SAFB	99	90.153	Sus_scrofa
ENSEASG00005023019	SAFB	93	59.909	ENSTGUG00000000489	-	97	62.500	Taeniopygia_guttata
ENSEASG00005023019	SAFB	96	63.818	ENSTGUG00000000502	-	97	63.387	Taeniopygia_guttata
ENSEASG00005023019	SAFB	90	42.610	ENSTRUG00000003567	safb	64	41.946	Takifugu_rubripes
ENSEASG00005023019	SAFB	88	42.774	ENSTNIG00000015470	safb	73	39.326	Tetraodon_nigroviridis
ENSEASG00005023019	SAFB	74	79.389	ENSTBEG00000013124	-	66	92.424	Tupaia_belangeri
ENSEASG00005023019	SAFB	94	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSEASG00005023019	SAFB	77	92.254	ENSUAMG00000024543	SAFB	99	91.972	Ursus_americanus
ENSEASG00005023019	SAFB	89	88.710	ENSUMAG00000009734	SAFB	96	89.176	Ursus_maritimus
ENSEASG00005023019	SAFB	73	95.420	ENSVPAG00000012043	SAFB	79	96.124	Vicugna_pacos
ENSEASG00005023019	SAFB	100	90.033	ENSVVUG00000013720	SAFB	92	89.242	Vulpes_vulpes
ENSEASG00005023019	SAFB	66	49.918	ENSXETG00000008755	safb	64	69.318	Xenopus_tropicalis
ENSEASG00005023019	SAFB	79	45.128	ENSXMAG00000003458	safb	54	53.232	Xiphophorus_maculatus