EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005023115 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 51307 bases
Position: chrPSZQ01004655.1:205347-256653
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005033832	PRP1_N	PF06424.12	1.9e-57	1	1
ENSEASP00005033825	PRP1_N	PF06424.12	1.9e-57	1	1
ENSEASP00005033829	PRP1_N	PF06424.12	1.9e-57	1	1
ENSEASP00005033831	PRP1_N	PF06424.12	2e-57	1	1
ENSEASP00005033828	PRP1_N	PF06424.12	2e-57	1	1
ENSEASP00005033827	PRP1_N	PF06424.12	2e-57	1	1
ENSEASP00005033830	PRP1_N	PF06424.12	2.2e-57	1	1
ENSEASP00005033826	PRP1_N	PF06424.12	4.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005036876	PRPF6-203	2934	-	ENSEASP00005033827	977 (aa)	-	-
ENSEAST00005036877	PRPF6-204	2913	-	ENSEASP00005033828	970 (aa)	-	-
ENSEAST00005036874	PRPF6-201	4023	-	ENSEASP00005033825	941 (aa)	-	UPI0004BD8F2A
ENSEAST00005036875	PRPF6-202	1800	-	ENSEASP00005033826	599 (aa)	-	-
ENSEAST00005036878	PRPF6-205	2853	-	ENSEASP00005033829	950 (aa)	-	-
ENSEAST00005036879	PRPF6-206	3060	-	ENSEASP00005033830	1019 (aa)	-	-
ENSEAST00005036881	PRPF6-208	2793	-	ENSEASP00005033832	930 (aa)	-	-
ENSEAST00005036880	PRPF6-207	2910	-	ENSEASP00005033831	969 (aa)	-	-

Gene Model

Click here to download ENSEASG00005023115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005023115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005023115	PRPF6	100	97.450	ENSG00000101161	PRPF6	100	97.450	Homo_sapiens
ENSEASG00005023115	PRPF6	100	92.880	ENSAPOG00000010395	prpf6	99	91.022	Acanthochromis_polyacanthus
ENSEASG00005023115	PRPF6	100	98.089	ENSAMEG00000001916	PRPF6	99	98.089	Ailuropoda_melanoleuca
ENSEASG00005023115	PRPF6	100	92.561	ENSACIG00000019862	prpf6	97	92.518	Amphilophus_citrinellus
ENSEASG00005023115	PRPF6	100	92.774	ENSAOCG00000012988	prpf6	99	90.918	Amphiprion_ocellaris
ENSEASG00005023115	PRPF6	100	86.291	ENSAPEG00000008301	prpf6	100	86.716	Amphiprion_percula
ENSEASG00005023115	PRPF6	100	92.455	ENSATEG00000005581	prpf6	97	92.413	Anabas_testudineus
ENSEASG00005023115	PRPF6	100	97.662	ENSACAG00000006464	PRPF6	97	96.343	Anolis_carolinensis
ENSEASG00005023115	PRPF6	100	97.556	ENSANAG00000012661	PRPF6	100	98.351	Aotus_nancymaae
ENSEASG00005023115	PRPF6	100	92.242	ENSACLG00000025875	prpf6	99	90.402	Astatotilapia_calliptera
ENSEASG00005023115	PRPF6	99	92.766	ENSAMXG00000001929	prpf6	97	92.429	Astyanax_mexicanus
ENSEASG00005023115	PRPF6	100	99.044	ENSBTAG00000011656	PRPF6	100	99.044	Bos_taurus
ENSEASG00005023115	PRPF6	100	97.556	ENSCJAG00000010616	PRPF6	100	97.556	Callithrix_jacchus
ENSEASG00005023115	PRPF6	100	99.150	ENSCAFG00000013165	PRPF6	100	99.150	Canis_familiaris
ENSEASG00005023115	PRPF6	100	99.150	ENSCAFG00020002050	PRPF6	100	99.150	Canis_lupus_dingo
ENSEASG00005023115	PRPF6	100	99.044	ENSCHIG00000018187	PRPF6	100	99.044	Capra_hircus
ENSEASG00005023115	PRPF6	100	98.300	ENSTSYG00000007814	PRPF6	100	98.300	Carlito_syrichta
ENSEASG00005023115	PRPF6	97	97.274	ENSCAPG00000015077	PRPF6	100	97.274	Cavia_aperea
ENSEASG00005023115	PRPF6	100	98.618	ENSCPOG00000007518	PRPF6	100	98.618	Cavia_porcellus
ENSEASG00005023115	PRPF6	100	94.261	ENSCCAG00000024564	PRPF6	100	94.368	Cebus_capucinus
ENSEASG00005023115	PRPF6	100	97.343	ENSCATG00000037473	PRPF6	100	97.343	Cercocebus_atys
ENSEASG00005023115	PRPF6	100	94.687	ENSCLAG00000003854	PRPF6	100	94.687	Chinchilla_lanigera
ENSEASG00005023115	PRPF6	100	92.291	ENSCSAG00000016742	PRPF6	100	92.291	Chlorocebus_sabaeus
ENSEASG00005023115	PRPF6	85	81.463	ENSCHOG00000003315	-	100	81.463	Choloepus_hoffmanni
ENSEASG00005023115	PRPF6	100	97.875	ENSCPBG00000013964	PRPF6	99	96.058	Chrysemys_picta_bellii
ENSEASG00005023115	PRPF6	99	73.890	ENSCING00000008817	-	99	73.890	Ciona_intestinalis
ENSEASG00005023115	PRPF6	100	97.343	ENSCANG00000038230	PRPF6	100	97.343	Colobus_angolensis_palliatus
ENSEASG00005023115	PRPF6	100	98.406	ENSCGRG00001022666	Prpf6	100	98.406	Cricetulus_griseus_chok1gshd
ENSEASG00005023115	PRPF6	100	86.929	ENSCSEG00000018561	prpf6	100	87.354	Cynoglossus_semilaevis
ENSEASG00005023115	PRPF6	100	92.880	ENSCVAG00000010550	prpf6	99	91.125	Cyprinodon_variegatus
ENSEASG00005023115	PRPF6	100	92.455	ENSDARG00000091367	prpf6	99	92.880	Danio_rerio
ENSEASG00005023115	PRPF6	100	97.981	ENSDNOG00000040544	PRPF6	100	97.981	Dasypus_novemcinctus
ENSEASG00005023115	PRPF6	91	97.664	ENSDORG00000005406	Prpf6	100	97.664	Dipodomys_ordii
ENSEASG00005023115	PRPF6	99	72.451	FBgn0036828	CG6841	98	73.123	Drosophila_melanogaster
ENSEASG00005023115	PRPF6	86	95.322	ENSETEG00000004447	PRPF6	85	95.322	Echinops_telfairi
ENSEASG00005023115	PRPF6	99	86.957	ENSEBUG00000008835	prpf6	99	86.957	Eptatretus_burgeri
ENSEASG00005023115	PRPF6	100	95.749	ENSECAG00000013983	PRPF6	100	95.749	Equus_caballus
ENSEASG00005023115	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSEASG00005023115	PRPF6	100	91.392	ENSELUG00000001945	prpf6	94	90.832	Esox_lucius
ENSEASG00005023115	PRPF6	100	99.256	ENSFCAG00000001183	PRPF6	100	99.256	Felis_catus
ENSEASG00005023115	PRPF6	100	90.117	ENSFALG00000006046	-	99	88.970	Ficedula_albicollis
ENSEASG00005023115	PRPF6	100	97.768	ENSFALG00000010326	-	100	95.701	Ficedula_albicollis
ENSEASG00005023115	PRPF6	100	97.131	ENSFDAG00000006451	PRPF6	100	98.526	Fukomys_damarensis
ENSEASG00005023115	PRPF6	100	93.411	ENSFHEG00000000560	prpf6	99	91.125	Fundulus_heteroclitus
ENSEASG00005023115	PRPF6	100	89.936	ENSGMOG00000015622	prpf6	99	90.032	Gadus_morhua
ENSEASG00005023115	PRPF6	100	97.556	ENSGALG00000006001	PRPF6	100	97.556	Gallus_gallus
ENSEASG00005023115	PRPF6	100	88.098	ENSGAFG00000021109	prpf6	99	86.378	Gambusia_affinis
ENSEASG00005023115	PRPF6	100	91.542	ENSGACG00000002576	prpf6	100	91.073	Gasterosteus_aculeatus
ENSEASG00005023115	PRPF6	100	97.768	ENSGAGG00000008653	PRPF6	99	96.058	Gopherus_agassizii
ENSEASG00005023115	PRPF6	100	97.450	ENSGGOG00000016876	PRPF6	100	97.450	Gorilla_gorilla
ENSEASG00005023115	PRPF6	100	92.242	ENSHBUG00000004496	prpf6	99	90.402	Haplochromis_burtoni
ENSEASG00005023115	PRPF6	100	98.406	ENSHGLG00000009222	PRPF6	100	98.406	Heterocephalus_glaber_female
ENSEASG00005023115	PRPF6	97	98.364	ENSHGLG00100016600	PRPF6	100	98.364	Heterocephalus_glaber_male
ENSEASG00005023115	PRPF6	100	91.286	ENSHCOG00000011513	prpf6	97	91.254	Hippocampus_comes
ENSEASG00005023115	PRPF6	100	93.305	ENSIPUG00000004912	prpf6	99	91.408	Ictalurus_punctatus
ENSEASG00005023115	PRPF6	100	96.072	ENSSTOG00000002922	PRPF6	100	96.072	Ictidomys_tridecemlineatus
ENSEASG00005023115	PRPF6	100	98.618	ENSJJAG00000000836	Prpf6	100	98.618	Jaculus_jaculus
ENSEASG00005023115	PRPF6	100	92.561	ENSKMAG00000017800	prpf6	99	90.712	Kryptolebias_marmoratus
ENSEASG00005023115	PRPF6	100	92.030	ENSLBEG00000012582	prpf6	99	89.886	Labrus_bergylta
ENSEASG00005023115	PRPF6	100	94.899	ENSLOCG00000004827	prpf6	97	93.361	Lepisosteus_oculatus
ENSEASG00005023115	PRPF6	100	97.556	ENSLAFG00000005272	PRPF6	100	97.556	Loxodonta_africana
ENSEASG00005023115	PRPF6	100	97.343	ENSMFAG00000037542	PRPF6	100	97.343	Macaca_fascicularis
ENSEASG00005023115	PRPF6	100	90.977	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSEASG00005023115	PRPF6	100	83.051	ENSMNEG00000045555	PRPF6	100	83.051	Macaca_nemestrina
ENSEASG00005023115	PRPF6	100	92.561	ENSMAMG00000010718	prpf6	97	92.518	Mastacembelus_armatus
ENSEASG00005023115	PRPF6	92	92.379	ENSMZEG00005026539	prpf6	98	92.379	Maylandia_zebra
ENSEASG00005023115	PRPF6	100	91.932	ENSMZEG00005015261	-	99	92.357	Maylandia_zebra
ENSEASG00005023115	PRPF6	97	97.710	ENSMGAG00000006634	PRPF6	100	97.710	Meleagris_gallopavo
ENSEASG00005023115	PRPF6	100	98.512	ENSMAUG00000013969	Prpf6	100	98.512	Mesocricetus_auratus
ENSEASG00005023115	PRPF6	87	97.810	ENSMICG00000017793	PRPF6	99	97.810	Microcebus_murinus
ENSEASG00005023115	PRPF6	100	98.618	ENSMOCG00000001701	Prpf6	100	98.618	Microtus_ochrogaster
ENSEASG00005023115	PRPF6	100	91.711	ENSMMOG00000020419	prpf6	100	92.136	Mola_mola
ENSEASG00005023115	PRPF6	99	99.137	ENSMODG00000017051	PRPF6	99	99.137	Monodelphis_domestica
ENSEASG00005023115	PRPF6	99	92.696	ENSMALG00000000089	prpf6	100	92.696	Monopterus_albus
ENSEASG00005023115	PRPF6	100	91.817	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSEASG00005023115	PRPF6	100	98.512	ENSMUSG00000002455	Prpf6	100	98.512	Mus_musculus
ENSEASG00005023115	PRPF6	100	98.512	MGP_PahariEiJ_G0026262	Prpf6	100	98.512	Mus_pahari
ENSEASG00005023115	PRPF6	100	98.512	MGP_SPRETEiJ_G0025741	Prpf6	100	98.512	Mus_spretus
ENSEASG00005023115	PRPF6	94	98.689	ENSMPUG00000008673	PRPF6	99	98.689	Mustela_putorius_furo
ENSEASG00005023115	PRPF6	100	98.725	ENSNGAG00000003365	Prpf6	100	98.725	Nannospalax_galili
ENSEASG00005023115	PRPF6	100	92.349	ENSNBRG00000015025	prpf6	99	90.506	Neolamprologus_brichardi
ENSEASG00005023115	PRPF6	100	97.343	ENSNLEG00000010208	PRPF6	100	97.343	Nomascus_leucogenys
ENSEASG00005023115	PRPF6	100	88.353	ENSMEUG00000009824	-	90	88.538	Notamacropus_eugenii
ENSEASG00005023115	PRPF6	100	92.561	ENSODEG00000004841	PRPF6	100	92.561	Octodon_degus
ENSEASG00005023115	PRPF6	100	92.242	ENSONIG00000017406	prpf6	99	90.402	Oreochromis_niloticus
ENSEASG00005023115	PRPF6	100	98.193	ENSOANG00000004920	PRPF6	100	98.193	Ornithorhynchus_anatinus
ENSEASG00005023115	PRPF6	99	96.888	ENSOCUG00000014151	PRPF6	100	96.888	Oryctolagus_cuniculus
ENSEASG00005023115	PRPF6	100	92.242	ENSORLG00000009592	prpf6	99	90.196	Oryzias_latipes
ENSEASG00005023115	PRPF6	100	92.349	ENSORLG00020001458	prpf6	99	90.299	Oryzias_latipes_hni
ENSEASG00005023115	PRPF6	100	92.349	ENSORLG00015018762	prpf6	99	90.299	Oryzias_latipes_hsok
ENSEASG00005023115	PRPF6	100	92.242	ENSOMEG00000012174	prpf6	97	92.202	Oryzias_melastigma
ENSEASG00005023115	PRPF6	100	90.552	ENSOGAG00000007573	PRPF6	100	90.552	Otolemur_garnettii
ENSEASG00005023115	PRPF6	100	98.618	ENSOARG00000008776	PRPF6	99	98.618	Ovis_aries
ENSEASG00005023115	PRPF6	100	97.450	ENSPPAG00000008686	PRPF6	100	97.450	Pan_paniscus
ENSEASG00005023115	PRPF6	100	99.150	ENSPPRG00000008497	PRPF6	100	99.150	Panthera_pardus
ENSEASG00005023115	PRPF6	97	99.128	ENSPTIG00000011184	PRPF6	97	99.128	Panthera_tigris_altaica
ENSEASG00005023115	PRPF6	100	97.450	ENSPTRG00000013765	PRPF6	100	97.450	Pan_troglodytes
ENSEASG00005023115	PRPF6	100	96.812	ENSPANG00000024135	PRPF6	100	96.812	Papio_anubis
ENSEASG00005023115	PRPF6	100	94.155	ENSPKIG00000005627	prpf6	99	94.580	Paramormyrops_kingsleyae
ENSEASG00005023115	PRPF6	94	97.959	ENSPSIG00000007717	PRPF6	100	97.959	Pelodiscus_sinensis
ENSEASG00005023115	PRPF6	100	90.374	ENSPMGG00000008925	prpf6	97	90.000	Periophthalmus_magnuspinnatus
ENSEASG00005023115	PRPF6	100	98.406	ENSPEMG00000016036	Prpf6	100	98.406	Peromyscus_maniculatus_bairdii
ENSEASG00005023115	PRPF6	99	88.417	ENSPMAG00000006144	prpf6	99	88.417	Petromyzon_marinus
ENSEASG00005023115	PRPF6	100	98.406	ENSPCIG00000017909	PRPF6	100	98.406	Phascolarctos_cinereus
ENSEASG00005023115	PRPF6	100	92.986	ENSPFOG00000006431	prpf6	96	93.411	Poecilia_formosa
ENSEASG00005023115	PRPF6	100	92.880	ENSPLAG00000005974	prpf6	98	92.050	Poecilia_latipinna
ENSEASG00005023115	PRPF6	100	93.092	ENSPMEG00000009977	prpf6	98	92.259	Poecilia_mexicana
ENSEASG00005023115	PRPF6	100	92.986	ENSPREG00000017993	prpf6	92	93.411	Poecilia_reticulata
ENSEASG00005023115	PRPF6	100	96.918	ENSPPYG00000011256	PRPF6	100	96.918	Pongo_abelii
ENSEASG00005023115	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSEASG00005023115	PRPF6	100	97.768	ENSPCOG00000016881	PRPF6	100	97.768	Propithecus_coquereli
ENSEASG00005023115	PRPF6	100	93.305	ENSPVAG00000014316	PRPF6	100	93.305	Pteropus_vampyrus
ENSEASG00005023115	PRPF6	100	79.572	ENSPNYG00000001939	prpf6	96	80.000	Pundamilia_nyererei
ENSEASG00005023115	PRPF6	100	93.305	ENSPNAG00000015606	prpf6	97	93.263	Pygocentrus_nattereri
ENSEASG00005023115	PRPF6	100	98.406	ENSRNOG00000051498	Prpf6	100	98.406	Rattus_norvegicus
ENSEASG00005023115	PRPF6	100	97.343	ENSRBIG00000043613	PRPF6	100	97.343	Rhinopithecus_bieti
ENSEASG00005023115	PRPF6	100	94.180	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSEASG00005023115	PRPF6	99	89.163	ENSSBOG00000020632	PRPF6	98	88.834	Saimiri_boliviensis_boliviensis
ENSEASG00005023115	PRPF6	100	98.406	ENSSHAG00000016810	PRPF6	100	98.406	Sarcophilus_harrisii
ENSEASG00005023115	PRPF6	99	94.522	ENSSFOG00015020859	prpf6	100	94.952	Scleropages_formosus
ENSEASG00005023115	PRPF6	100	91.817	ENSSMAG00000008112	prpf6	98	90.690	Scophthalmus_maximus
ENSEASG00005023115	PRPF6	100	92.455	ENSSDUG00000016142	prpf6	98	91.736	Seriola_dumerili
ENSEASG00005023115	PRPF6	100	92.455	ENSSLDG00000025283	prpf6	100	89.479	Seriola_lalandi_dorsalis
ENSEASG00005023115	PRPF6	94	96.372	ENSSPUG00000018260	PRPF6	100	96.372	Sphenodon_punctatus
ENSEASG00005023115	PRPF6	100	92.455	ENSSPAG00000015850	prpf6	97	92.413	Stegastes_partitus
ENSEASG00005023115	PRPF6	100	99.044	ENSSSCG00000029119	PRPF6	100	98.980	Sus_scrofa
ENSEASG00005023115	PRPF6	100	97.875	ENSTGUG00000007221	PRPF6	99	97.875	Taeniopygia_guttata
ENSEASG00005023115	PRPF6	100	91.605	ENSTRUG00000002920	prpf6	98	90.635	Takifugu_rubripes
ENSEASG00005023115	PRPF6	100	85.307	ENSTNIG00000017873	prpf6	100	85.729	Tetraodon_nigroviridis
ENSEASG00005023115	PRPF6	90	98.343	ENSTBEG00000005348	PRPF6	85	98.343	Tupaia_belangeri
ENSEASG00005023115	PRPF6	100	98.406	ENSTTRG00000013068	PRPF6	100	98.406	Tursiops_truncatus
ENSEASG00005023115	PRPF6	99	96.637	ENSUMAG00000021631	PRPF6	99	96.637	Ursus_maritimus
ENSEASG00005023115	PRPF6	100	99.150	ENSVVUG00000014948	PRPF6	100	99.150	Vulpes_vulpes
ENSEASG00005023115	PRPF6	100	95.005	ENSXETG00000012054	prpf6	98	94.742	Xenopus_tropicalis
ENSEASG00005023115	PRPF6	100	93.092	ENSXCOG00000008082	prpf6	98	92.259	Xiphophorus_couchianus
ENSEASG00005023115	PRPF6	100	93.092	ENSXMAG00000015581	prpf6	98	92.259	Xiphophorus_maculatus