EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEASG00005023132 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Equus_asinus_asinus
Status
putative
Strand
Plus strand
Length
205448 bases
Position
chrPSZQ01003664.1:33924118-34129565
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEASP00005033808RRM_1PF00076.227.4e-3312
ENSEASP00005033808RRM_1PF00076.227.4e-3322
ENSEASP00005033807RRM_1PF00076.227.9e-3312
ENSEASP00005033807RRM_1PF00076.227.9e-3322
ENSEASP00005033805RRM_1PF00076.228e-3312
ENSEASP00005033805RRM_1PF00076.228e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEAST00005036850RBMS1-2011276-ENSEASP00005033805422 (aa)-UPI00071A3077
ENSEAST00005036852RBMS1-2021592-ENSEASP00005033807420 (aa)-UPI00071A1AA5
ENSEAST00005036853RBMS1-2031544-ENSEASP00005033808404 (aa)--
Gene Model
Click here to download ENSEASG00005023132's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005023132's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEASG00005023132RBMS15633.871ENSEASG00005010728ELAVL47235.266
ENSEASG00005023132RBMS15036.667ENSEASG00005004561ELAVL36336.782
ENSEASG00005023132RBMS110069.231ENSEASG00005006152RBMS39971.106
ENSEASG00005023132RBMS18772.778ENSEASG00005005834RBMS28682.114
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEASG00005023132RBMS110095.024ENSG00000153250RBMS110098.425Homo_sapiens
ENSEASG00005023132RBMS110076.355ENSAPOG00000024437-9776.923Acanthochromis_polyacanthus
ENSEASG00005023132RBMS19962.155ENSAPOG00000013761rbms1a8965.994Acanthochromis_polyacanthus
ENSEASG00005023132RBMS19596.891ENSAMEG00000012661RBMS19996.891Ailuropoda_melanoleuca
ENSEASG00005023132RBMS19956.391ENSACIG00000000113rbms1a8959.654Amphilophus_citrinellus
ENSEASG00005023132RBMS19875.443ENSACIG00000021498RBMS19477.926Amphilophus_citrinellus
ENSEASG00005023132RBMS19962.406ENSAOCG00000010066rbms1a8966.282Amphiprion_ocellaris
ENSEASG00005023132RBMS110077.037ENSAOCG00000014482-9778.663Amphiprion_ocellaris
ENSEASG00005023132RBMS110076.790ENSAPEG00000018371-9778.406Amphiprion_percula
ENSEASG00005023132RBMS19962.406ENSAPEG00000023563rbms1a8966.282Amphiprion_percula
ENSEASG00005023132RBMS110074.321ENSATEG00000018573RBMS19775.064Anabas_testudineus
ENSEASG00005023132RBMS19961.404ENSATEG00000015450rbms1a8965.130Anabas_testudineus
ENSEASG00005023132RBMS19492.913ENSAPLG00000007282RBMS110089.130Anas_platyrhynchos
ENSEASG00005023132RBMS19693.590ENSACAG00000011984RBMS18191.795Anolis_carolinensis
ENSEASG00005023132RBMS18098.447ENSANAG00000024424RBMS110098.447Aotus_nancymaae
ENSEASG00005023132RBMS110074.010ENSACLG00000013048RBMS19775.515Astatotilapia_calliptera
ENSEASG00005023132RBMS19961.404ENSACLG00000021512rbms1a9065.418Astatotilapia_calliptera
ENSEASG00005023132RBMS110076.355ENSAMXG00000009969RBMS19776.923Astyanax_mexicanus
ENSEASG00005023132RBMS110072.167ENSAMXG00000002146rbms1a9772.634Astyanax_mexicanus
ENSEASG00005023132RBMS110098.815ENSBTAG00000005180RBMS110098.815Bos_taurus
ENSEASG00005023132RBMS19688.630ENSCJAG00000022465-9990.439Callithrix_jacchus
ENSEASG00005023132RBMS19694.057ENSCJAG00000012871-9994.415Callithrix_jacchus
ENSEASG00005023132RBMS110094.787ENSCJAG00000014861-10094.787Callithrix_jacchus
ENSEASG00005023132RBMS110098.762ENSCAFG00000009922RBMS110098.762Canis_familiaris
ENSEASG00005023132RBMS110098.341ENSCAFG00020006120RBMS110098.341Canis_lupus_dingo
ENSEASG00005023132RBMS110098.104ENSCHIG00000023380RBMS110098.104Capra_hircus
ENSEASG00005023132RBMS110095.261ENSTSYG00000005584RBMS110098.123Carlito_syrichta
ENSEASG00005023132RBMS110094.076ENSCPOG00000012310RBMS110097.733Cavia_porcellus
ENSEASG00005023132RBMS110094.787ENSCCAG00000033841RBMS19998.429Cebus_capucinus
ENSEASG00005023132RBMS110095.261ENSCATG00000043032RBMS110098.201Cercocebus_atys
ENSEASG00005023132RBMS110094.313ENSCLAG00000003031RBMS110097.686Chinchilla_lanigera
ENSEASG00005023132RBMS110095.261ENSCSAG00000015687RBMS110095.261Chlorocebus_sabaeus
ENSEASG00005023132RBMS15298.837ENSCHOG00000001579RBMS17398.837Choloepus_hoffmanni
ENSEASG00005023132RBMS110092.822ENSCPBG00000026455RBMS19794.072Chrysemys_picta_bellii
ENSEASG00005023132RBMS110095.261ENSCANG00000042152RBMS110098.187Colobus_angolensis_palliatus
ENSEASG00005023132RBMS110095.714ENSCGRG00001022833Rbms110095.714Cricetulus_griseus_chok1gshd
ENSEASG00005023132RBMS110096.919ENSCGRG00000008824Rbms110096.919Cricetulus_griseus_crigri
ENSEASG00005023132RBMS110071.990ENSCSEG00000010652RBMS19771.355Cynoglossus_semilaevis
ENSEASG00005023132RBMS19959.649ENSCSEG00000000889rbms1a9063.112Cynoglossus_semilaevis
ENSEASG00005023132RBMS19961.905ENSCVAG00000014698rbms1a8965.418Cyprinodon_variegatus
ENSEASG00005023132RBMS110072.346ENSCVAG00000002027RBMS19675.852Cyprinodon_variegatus
ENSEASG00005023132RBMS110071.990ENSDARG00000074023rbms1a9772.634Danio_rerio
ENSEASG00005023132RBMS19399.486ENSDNOG00000040691RBMS110099.486Dasypus_novemcinctus
ENSEASG00005023132RBMS110094.076ENSDORG00000007103Rbms110097.943Dipodomys_ordii
ENSEASG00005023132RBMS19485.827ENSETEG00000012135RBMS110085.827Echinops_telfairi
ENSEASG00005023132RBMS1100100.000ENSECAG00000019894RBMS1100100.000Equus_caballus
ENSEASG00005023132RBMS17496.296ENSEEUG00000005628RBMS17496.296Erinaceus_europaeus
ENSEASG00005023132RBMS19769.643ENSELUG00000019328RBMS19470.789Esox_lucius
ENSEASG00005023132RBMS19964.428ENSELUG00000018923rbms1a9468.857Esox_lucius
ENSEASG00005023132RBMS110095.024ENSFCAG00000012524RBMS110097.855Felis_catus
ENSEASG00005023132RBMS18792.330ENSFALG00000004440RBMS19492.330Ficedula_albicollis
ENSEASG00005023132RBMS110094.550ENSFDAG00000015692RBMS110097.733Fukomys_damarensis
ENSEASG00005023132RBMS110071.605ENSFHEG00000000720RBMS19773.265Fundulus_heteroclitus
ENSEASG00005023132RBMS19962.155ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSEASG00005023132RBMS18462.678ENSGMOG00000000525rbms1a9961.983Gadus_morhua
ENSEASG00005023132RBMS110090.594ENSGALG00000011132RBMS19692.784Gallus_gallus
ENSEASG00005023132RBMS19065.289ENSGAFG00000011633rbms1a9565.994Gambusia_affinis
ENSEASG00005023132RBMS110071.605ENSGAFG00000007708RBMS19774.550Gambusia_affinis
ENSEASG00005023132RBMS19062.269ENSGACG00000015174rbms1a9166.564Gasterosteus_aculeatus
ENSEASG00005023132RBMS110073.827ENSGACG00000005671RBMS19774.550Gasterosteus_aculeatus
ENSEASG00005023132RBMS110092.574ENSGAGG00000007866RBMS19793.814Gopherus_agassizii
ENSEASG00005023132RBMS110096.040ENSGGOG00000043756-10096.040Gorilla_gorilla
ENSEASG00005023132RBMS19597.922ENSGGOG00000001264RBMS110097.943Gorilla_gorilla
ENSEASG00005023132RBMS19961.404ENSHBUG00000004802rbms1a9065.418Haplochromis_burtoni
ENSEASG00005023132RBMS19476.253ENSHBUG00000004516RBMS19577.961Haplochromis_burtoni
ENSEASG00005023132RBMS110093.839ENSHGLG00000010387RBMS110097.481Heterocephalus_glaber_female
ENSEASG00005023132RBMS19796.410ENSHGLG00100014105RBMS110097.481Heterocephalus_glaber_male
ENSEASG00005023132RBMS110072.346ENSHCOG00000016668RBMS19773.522Hippocampus_comes
ENSEASG00005023132RBMS19960.150ENSHCOG00000020097rbms1a8963.977Hippocampus_comes
ENSEASG00005023132RBMS110072.167ENSIPUG00000010131RBMS19772.634Ictalurus_punctatus
ENSEASG00005023132RBMS110076.790ENSIPUG00000014677RBMS19778.149Ictalurus_punctatus
ENSEASG00005023132RBMS110094.313ENSSTOG00000012501RBMS110097.733Ictidomys_tridecemlineatus
ENSEASG00005023132RBMS110093.839ENSJJAG00000016543Rbms110097.429Jaculus_jaculus
ENSEASG00005023132RBMS19960.150ENSKMAG00000011839-8963.977Kryptolebias_marmoratus
ENSEASG00005023132RBMS110076.296ENSKMAG00000013911RBMS19778.149Kryptolebias_marmoratus
ENSEASG00005023132RBMS19961.905ENSLBEG00000025962rbms1a8965.706Labrus_bergylta
ENSEASG00005023132RBMS110075.309ENSLBEG00000005787RBMS19776.864Labrus_bergylta
ENSEASG00005023132RBMS110080.685ENSLACG00000004324RBMS19681.425Latimeria_chalumnae
ENSEASG00005023132RBMS110083.210ENSLOCG00000008622rbms1a9885.128Lepisosteus_oculatus
ENSEASG00005023132RBMS19597.906ENSLAFG00000017217RBMS110097.906Loxodonta_africana
ENSEASG00005023132RBMS110095.261ENSMFAG00000000274RBMS110098.123Macaca_fascicularis
ENSEASG00005023132RBMS110098.333ENSMMUG00000016825RBMS110098.333Macaca_mulatta
ENSEASG00005023132RBMS110095.261ENSMNEG00000039425RBMS110098.123Macaca_nemestrina
ENSEASG00005023132RBMS19598.691ENSMLEG00000031517RBMS110097.927Mandrillus_leucophaeus
ENSEASG00005023132RBMS19960.150ENSMAMG00000005018rbms1a8963.689Mastacembelus_armatus
ENSEASG00005023132RBMS110073.086ENSMAMG00000003159-9775.064Mastacembelus_armatus
ENSEASG00005023132RBMS18178.049ENSMZEG00005007313RBMS19177.982Maylandia_zebra
ENSEASG00005023132RBMS19961.404ENSMZEG00005005661rbms1a9065.418Maylandia_zebra
ENSEASG00005023132RBMS18793.182ENSMGAG00000011054RBMS110092.097Meleagris_gallopavo
ENSEASG00005023132RBMS110096.190ENSMAUG00000008550Rbms110096.190Mesocricetus_auratus
ENSEASG00005023132RBMS110094.787ENSMICG00000008325RBMS110098.429Microcebus_murinus
ENSEASG00005023132RBMS110094.286ENSMOCG00000022617Rbms110095.373Microtus_ochrogaster
ENSEASG00005023132RBMS18764.489ENSMMOG00000018249rbms1a8169.333Mola_mola
ENSEASG00005023132RBMS110075.062ENSMMOG00000003707RBMS19776.607Mola_mola
ENSEASG00005023132RBMS110090.995ENSMODG00000005250RBMS110090.995Monodelphis_domestica
ENSEASG00005023132RBMS19960.902ENSMALG00000014235rbms1a8964.553Monopterus_albus
ENSEASG00005023132RBMS19673.057ENSMALG00000015715-9772.468Monopterus_albus
ENSEASG00005023132RBMS110094.524MGP_CAROLIEiJ_G0023586Rbms110095.630Mus_caroli
ENSEASG00005023132RBMS110095.000ENSMUSG00000026970Rbms110096.144Mus_musculus
ENSEASG00005023132RBMS110094.286MGP_PahariEiJ_G0025037Rbms110094.286Mus_pahari
ENSEASG00005023132RBMS110094.762MGP_SPRETEiJ_G0024508Rbms110095.887Mus_spretus
ENSEASG00005023132RBMS110098.104ENSMPUG00000000539RBMS110098.104Mustela_putorius_furo
ENSEASG00005023132RBMS19993.602ENSMLUG00000008762RBMS19993.602Myotis_lucifugus
ENSEASG00005023132RBMS110095.714ENSNGAG00000013636Rbms110095.714Nannospalax_galili
ENSEASG00005023132RBMS18772.805ENSNBRG00000015151RBMS19473.011Neolamprologus_brichardi
ENSEASG00005023132RBMS18863.277ENSNBRG00000020217rbms1a8568.212Neolamprologus_brichardi
ENSEASG00005023132RBMS110095.024ENSNLEG00000001667RBMS110097.855Nomascus_leucogenys
ENSEASG00005023132RBMS18081.677ENSMEUG00000000746RBMS110081.677Notamacropus_eugenii
ENSEASG00005023132RBMS110088.389ENSOPRG00000012431RBMS110088.389Ochotona_princeps
ENSEASG00005023132RBMS110094.313ENSODEG00000013934RBMS110097.429Octodon_degus
ENSEASG00005023132RBMS19962.000ENSONIG00000003329rbms1a8865.706Oreochromis_niloticus
ENSEASG00005023132RBMS110074.752ENSONIG00000008934RBMS19776.289Oreochromis_niloticus
ENSEASG00005023132RBMS19494.488ENSOANG00000006166RBMS19694.488Ornithorhynchus_anatinus
ENSEASG00005023132RBMS15355.967ENSOANG00000004477-9956.198Ornithorhynchus_anatinus
ENSEASG00005023132RBMS19597.120ENSOCUG00000017365RBMS18997.120Oryctolagus_cuniculus
ENSEASG00005023132RBMS19063.085ENSORLG00000003917rbms1a9063.689Oryzias_latipes
ENSEASG00005023132RBMS19671.134ENSORLG00000016818RBMS19671.465Oryzias_latipes
ENSEASG00005023132RBMS19671.392ENSORLG00020022335RBMS19671.208Oryzias_latipes_hni
ENSEASG00005023132RBMS19062.810ENSORLG00020018663rbms1a9063.401Oryzias_latipes_hni
ENSEASG00005023132RBMS19671.907ENSORLG00015018208RBMS19671.722Oryzias_latipes_hsok
ENSEASG00005023132RBMS19063.085ENSORLG00015016556rbms1a9063.689Oryzias_latipes_hsok
ENSEASG00005023132RBMS19672.351ENSOMEG00000002394RBMS19672.165Oryzias_melastigma
ENSEASG00005023132RBMS19297.600ENSOGAG00000002900RBMS110097.600Otolemur_garnettii
ENSEASG00005023132RBMS110094.550ENSOARG00000006870RBMS110097.442Ovis_aries
ENSEASG00005023132RBMS19598.691ENSPPAG00000040083RBMS110098.691Pan_paniscus
ENSEASG00005023132RBMS19394.681ENSPPAG00000036520-9994.681Pan_paniscus
ENSEASG00005023132RBMS110095.024ENSPPRG00000005040RBMS110097.855Panthera_pardus
ENSEASG00005023132RBMS19498.688ENSPTIG00000021240RBMS110097.855Panthera_tigris_altaica
ENSEASG00005023132RBMS19595.812ENSPTRG00000039358-9995.812Pan_troglodytes
ENSEASG00005023132RBMS110095.024ENSPTRG00000052304RBMS110098.691Pan_troglodytes
ENSEASG00005023132RBMS110094.550ENSPANG00000001383RBMS19998.691Papio_anubis
ENSEASG00005023132RBMS110078.133ENSPKIG00000001498rbms1a9878.571Paramormyrops_kingsleyae
ENSEASG00005023132RBMS110075.000ENSPKIG00000012818rbms1a9876.350Paramormyrops_kingsleyae
ENSEASG00005023132RBMS110090.047ENSPSIG00000010240RBMS110090.047Pelodiscus_sinensis
ENSEASG00005023132RBMS19957.644ENSPMGG00000004341rbms1a9061.095Periophthalmus_magnuspinnatus
ENSEASG00005023132RBMS18277.039ENSPMGG00000006310RBMS19568.750Periophthalmus_magnuspinnatus
ENSEASG00005023132RBMS19995.465ENSPEMG00000009449Rbms110095.465Peromyscus_maniculatus_bairdii
ENSEASG00005023132RBMS110093.564ENSPCIG00000018405RBMS110093.564Phascolarctos_cinereus
ENSEASG00005023132RBMS19962.155ENSPFOG00000016116rbms1a8965.994Poecilia_formosa
ENSEASG00005023132RBMS110073.580ENSPFOG00000017483RBMS19775.064Poecilia_formosa
ENSEASG00005023132RBMS19962.155ENSPLAG00000013864rbms1a8965.994Poecilia_latipinna
ENSEASG00005023132RBMS110072.099ENSPLAG00000000920RBMS19774.807Poecilia_latipinna
ENSEASG00005023132RBMS19962.155ENSPMEG00000016185rbms1a8965.994Poecilia_mexicana
ENSEASG00005023132RBMS110073.580ENSPMEG00000015838RBMS19775.064Poecilia_mexicana
ENSEASG00005023132RBMS19962.155ENSPREG00000020161rbms1a8965.994Poecilia_reticulata
ENSEASG00005023132RBMS110073.333ENSPREG00000008146RBMS19774.807Poecilia_reticulata
ENSEASG00005023132RBMS110098.578ENSPPYG00000012879-10098.578Pongo_abelii
ENSEASG00005023132RBMS110088.626ENSPCAG00000009673RBMS110088.626Procavia_capensis
ENSEASG00005023132RBMS110095.024ENSPCOG00000027294RBMS110097.855Propithecus_coquereli
ENSEASG00005023132RBMS110082.701ENSPVAG00000010429RBMS110082.701Pteropus_vampyrus
ENSEASG00005023132RBMS110074.505ENSPNYG00000002643RBMS19776.031Pundamilia_nyererei
ENSEASG00005023132RBMS110076.601ENSPNAG00000023479RBMS19777.179Pygocentrus_nattereri
ENSEASG00005023132RBMS18773.864ENSPNAG00000010225rbms1a8873.864Pygocentrus_nattereri
ENSEASG00005023132RBMS110092.417ENSRNOG00000008482Rbms19994.514Rattus_norvegicus
ENSEASG00005023132RBMS110098.815ENSRBIG00000044262RBMS110098.815Rhinopithecus_bieti
ENSEASG00005023132RBMS110099.052ENSRROG00000043108RBMS110099.052Rhinopithecus_roxellana
ENSEASG00005023132RBMS19398.458ENSSBOG00000034705RBMS110098.458Saimiri_boliviensis_boliviensis
ENSEASG00005023132RBMS110091.232ENSSHAG00000012271RBMS110091.232Sarcophilus_harrisii
ENSEASG00005023132RBMS19979.602ENSSFOG00015022929rbms19781.088Scleropages_formosus
ENSEASG00005023132RBMS18779.830ENSSFOG00015014493rbms1a9579.830Scleropages_formosus
ENSEASG00005023132RBMS110073.827ENSSMAG00000012152RBMS19375.578Scophthalmus_maximus
ENSEASG00005023132RBMS18664.943ENSSMAG00000012722rbms1a9565.130Scophthalmus_maximus
ENSEASG00005023132RBMS19962.155ENSSDUG00000020602rbms1a9565.994Seriola_dumerili
ENSEASG00005023132RBMS110076.049ENSSDUG00000018803RBMS19777.635Seriola_dumerili
ENSEASG00005023132RBMS110075.802ENSSLDG00000016556RBMS19777.378Seriola_lalandi_dorsalis
ENSEASG00005023132RBMS19962.155ENSSLDG00000009495rbms1a8965.994Seriola_lalandi_dorsalis
ENSEASG00005023132RBMS18186.905ENSSARG00000011085RBMS18486.905Sorex_araneus
ENSEASG00005023132RBMS18793.466ENSSPUG00000017163RBMS19493.466Sphenodon_punctatus
ENSEASG00005023132RBMS19961.905ENSSPAG00000005371rbms1a8965.706Stegastes_partitus
ENSEASG00005023132RBMS110076.790ENSSPAG00000000059RBMS19778.406Stegastes_partitus
ENSEASG00005023132RBMS110098.104ENSSSCG00000015888RBMS110098.104Sus_scrofa
ENSEASG00005023132RBMS110089.336ENSTGUG00000006606RBMS110089.336Taeniopygia_guttata
ENSEASG00005023132RBMS110070.516ENSTRUG00000005466-9773.146Takifugu_rubripes
ENSEASG00005023132RBMS18564.348ENSTRUG00000017155rbms1a8964.265Takifugu_rubripes
ENSEASG00005023132RBMS19374.801ENSTNIG00000016496RBMS19776.989Tetraodon_nigroviridis
ENSEASG00005023132RBMS18862.994ENSTNIG00000009477rbms1a9963.303Tetraodon_nigroviridis
ENSEASG00005023132RBMS19487.139ENSTBEG00000016156RBMS110087.139Tupaia_belangeri
ENSEASG00005023132RBMS19498.688ENSTTRG00000011058RBMS110098.688Tursiops_truncatus
ENSEASG00005023132RBMS110097.867ENSUAMG00000022331RBMS110097.867Ursus_americanus
ENSEASG00005023132RBMS19597.494ENSUMAG00000008605RBMS19997.494Ursus_maritimus
ENSEASG00005023132RBMS19493.199ENSVPAG00000002716RBMS110093.199Vicugna_pacos
ENSEASG00005023132RBMS110098.341ENSVVUG00000018682RBMS110098.458Vulpes_vulpes
ENSEASG00005023132RBMS19584.073ENSXETG00000016204rbms110083.290Xenopus_tropicalis
ENSEASG00005023132RBMS18775.284ENSXCOG00000000211RBMS19575.284Xiphophorus_couchianus
ENSEASG00005023132RBMS19959.398ENSXCOG00000001659rbms1a8962.536Xiphophorus_couchianus
ENSEASG00005023132RBMS110073.086ENSXMAG00000011405RBMS19774.550Xiphophorus_maculatus
ENSEASG00005023132RBMS19962.406ENSXMAG00000001802rbms1a8965.994Xiphophorus_maculatus

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