EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEASG00005023429 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 3316 bases
Position: chrPSZQ01004655.1:16591895-16595210
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005034310	RRM_1	PF00076.22	8.3e-33	1	2
ENSEASP00005034310	RRM_1	PF00076.22	8.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005037396	SRSF6-201	1035	-	ENSEASP00005034310	344 (aa)	-	UPI000C9DCB26

Gene Model

Click here to download ENSEASG00005023429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005023429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEASG00005023429	SRSF6	52	65.922	ENSEASG00005016615	SRSF5	66	64.674
ENSEASG00005023429	SRSF6	58	41.148	ENSEASG00005002922	-	76	42.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005023429	SRSF6	100	96.821	ENSG00000124193	SRSF6	100	96.821	Homo_sapiens
ENSEASG00005023429	SRSF6	94	83.951	ENSAMEG00000003710	SRSF6	94	83.951	Ailuropoda_melanoleuca
ENSEASG00005023429	SRSF6	97	62.353	ENSACIG00000023658	-	69	75.113	Amphilophus_citrinellus
ENSEASG00005023429	SRSF6	80	69.455	ENSACIG00000020091	-	95	81.102	Amphilophus_citrinellus
ENSEASG00005023429	SRSF6	53	85.792	ENSAOCG00000004309	-	57	83.696	Amphiprion_ocellaris
ENSEASG00005023429	SRSF6	53	88.649	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSEASG00005023429	SRSF6	54	82.632	ENSAPEG00000020746	-	66	80.319	Amphiprion_percula
ENSEASG00005023429	SRSF6	53	81.622	ENSATEG00000007255	-	71	80.541	Anabas_testudineus
ENSEASG00005023429	SRSF6	53	93.443	ENSACAG00000002061	SRSF6	92	69.565	Anolis_carolinensis
ENSEASG00005023429	SRSF6	100	96.243	ENSANAG00000024080	SRSF6	100	96.243	Aotus_nancymaae
ENSEASG00005023429	SRSF6	53	86.559	ENSAMXG00000003101	-	51	84.737	Astyanax_mexicanus
ENSEASG00005023429	SRSF6	53	83.333	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSEASG00005023429	SRSF6	100	98.551	ENSBTAG00000008527	SRSF6	100	98.551	Bos_taurus
ENSEASG00005023429	SRSF6	78	97.761	ENSCJAG00000048403	SRSF6	99	97.761	Callithrix_jacchus
ENSEASG00005023429	SRSF6	100	98.841	ENSCAFG00000009289	SRSF6	100	98.841	Canis_familiaris
ENSEASG00005023429	SRSF6	100	98.841	ENSCAFG00020013559	SRSF6	100	98.841	Canis_lupus_dingo
ENSEASG00005023429	SRSF6	100	98.551	ENSCHIG00000009148	-	100	98.551	Capra_hircus
ENSEASG00005023429	SRSF6	100	99.130	ENSCHIG00000015890	-	100	99.130	Capra_hircus
ENSEASG00005023429	SRSF6	100	82.609	ENSTSYG00000026476	SRSF6	100	82.609	Carlito_syrichta
ENSEASG00005023429	SRSF6	94	80.186	ENSCPOG00000011761	SRSF6	70	95.455	Cavia_porcellus
ENSEASG00005023429	SRSF6	100	96.532	ENSCCAG00000026018	-	100	96.532	Cebus_capucinus
ENSEASG00005023429	SRSF6	94	64.308	ENSCCAG00000018540	-	62	86.702	Cebus_capucinus
ENSEASG00005023429	SRSF6	100	96.812	ENSCATG00000030794	SRSF6	100	96.812	Cercocebus_atys
ENSEASG00005023429	SRSF6	94	96.605	ENSCLAG00000010247	SRSF6	94	95.679	Chinchilla_lanigera
ENSEASG00005023429	SRSF6	100	96.812	ENSCSAG00000014022	SRSF6	100	96.812	Chlorocebus_sabaeus
ENSEASG00005023429	SRSF6	54	91.489	ENSCPBG00000018200	SRSF6	94	72.086	Chrysemys_picta_bellii
ENSEASG00005023429	SRSF6	100	82.319	ENSCANG00000042529	-	100	82.319	Colobus_angolensis_palliatus
ENSEASG00005023429	SRSF6	100	96.522	ENSCANG00000037774	-	100	96.522	Colobus_angolensis_palliatus
ENSEASG00005023429	SRSF6	94	96.605	ENSCGRG00001022339	Srsf6	95	95.679	Cricetulus_griseus_chok1gshd
ENSEASG00005023429	SRSF6	53	83.957	ENSDARG00000016783	srsf6b	82	92.308	Danio_rerio
ENSEASG00005023429	SRSF6	94	95.679	ENSDNOG00000008410	SRSF6	54	98.930	Dasypus_novemcinctus
ENSEASG00005023429	SRSF6	94	96.615	ENSDORG00000028378	Srsf6	94	95.988	Dipodomys_ordii
ENSEASG00005023429	SRSF6	93	75.000	ENSETEG00000006221	SRSF6	94	90.123	Echinops_telfairi
ENSEASG00005023429	SRSF6	100	100.000	ENSECAG00000023932	SRSF6	100	100.000	Equus_caballus
ENSEASG00005023429	SRSF6	66	78.761	ENSELUG00000013506	SRSF6	70	89.744	Esox_lucius
ENSEASG00005023429	SRSF6	100	98.841	ENSFCAG00000032814	SRSF6	100	98.841	Felis_catus
ENSEASG00005023429	SRSF6	94	80.556	ENSFDAG00000012191	SRSF6	93	77.160	Fukomys_damarensis
ENSEASG00005023429	SRSF6	87	70.199	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSEASG00005023429	SRSF6	53	82.320	ENSGMOG00000014458	srsf6a	52	77.604	Gadus_morhua
ENSEASG00005023429	SRSF6	53	89.840	ENSGALG00000000990	SRSF6	94	71.212	Gallus_gallus
ENSEASG00005023429	SRSF6	87	59.467	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSEASG00005023429	SRSF6	54	91.489	ENSGAGG00000003238	SRSF6	94	72.086	Gopherus_agassizii
ENSEASG00005023429	SRSF6	100	96.821	ENSGGOG00000009808	SRSF6	100	96.821	Gorilla_gorilla
ENSEASG00005023429	SRSF6	63	74.123	ENSHBUG00000006386	-	58	84.239	Haplochromis_burtoni
ENSEASG00005023429	SRSF6	90	76.774	ENSHGLG00000007701	-	58	78.075	Heterocephalus_glaber_female
ENSEASG00005023429	SRSF6	94	96.605	ENSHGLG00000007348	SRSF6	94	95.679	Heterocephalus_glaber_female
ENSEASG00005023429	SRSF6	94	80.864	ENSHGLG00100005043	SRSF6	93	77.469	Heterocephalus_glaber_male
ENSEASG00005023429	SRSF6	53	82.514	ENSHCOG00000002740	srsf6a	57	82.065	Hippocampus_comes
ENSEASG00005023429	SRSF6	53	86.957	ENSIPUG00000004776	-	64	86.413	Ictalurus_punctatus
ENSEASG00005023429	SRSF6	94	96.000	ENSSTOG00000010866	SRSF6	94	95.370	Ictidomys_tridecemlineatus
ENSEASG00005023429	SRSF6	76	66.904	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSEASG00005023429	SRSF6	53	84.783	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSEASG00005023429	SRSF6	90	81.731	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSEASG00005023429	SRSF6	69	95.397	ENSLAFG00000006682	SRSF6	89	70.306	Loxodonta_africana
ENSEASG00005023429	SRSF6	100	96.812	ENSMFAG00000036925	SRSF6	100	96.812	Macaca_fascicularis
ENSEASG00005023429	SRSF6	100	96.812	ENSMMUG00000006742	SRSF6	100	96.812	Macaca_mulatta
ENSEASG00005023429	SRSF6	100	96.232	ENSMNEG00000027392	-	100	96.232	Macaca_nemestrina
ENSEASG00005023429	SRSF6	93	95.342	ENSMNEG00000038270	-	94	94.444	Macaca_nemestrina
ENSEASG00005023429	SRSF6	63	95.833	ENSMLEG00000031524	SRSF6	100	95.833	Mandrillus_leucophaeus
ENSEASG00005023429	SRSF6	53	88.108	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSEASG00005023429	SRSF6	63	72.294	ENSMZEG00005008032	-	57	84.239	Maylandia_zebra
ENSEASG00005023429	SRSF6	100	96.821	ENSMICG00000008537	SRSF6	100	96.821	Microcebus_murinus
ENSEASG00005023429	SRSF6	54	94.624	ENSMODG00000003107	SRSF6	55	95.745	Monodelphis_domestica
ENSEASG00005023429	SRSF6	94	95.679	MGP_CAROLIEiJ_G0024606	Srsf6	58	98.718	Mus_caroli
ENSEASG00005023429	SRSF6	94	95.988	ENSMUSG00000016921	Srsf6	95	95.062	Mus_musculus
ENSEASG00005023429	SRSF6	94	95.988	MGP_PahariEiJ_G0026050	Srsf6	58	98.718	Mus_pahari
ENSEASG00005023429	SRSF6	94	95.988	MGP_SPRETEiJ_G0025528	Srsf6	95	95.062	Mus_spretus
ENSEASG00005023429	SRSF6	83	98.958	ENSMPUG00000017692	SRSF6	99	98.958	Mustela_putorius_furo
ENSEASG00005023429	SRSF6	54	72.193	ENSMLUG00000016618	SRSF6	54	72.193	Myotis_lucifugus
ENSEASG00005023429	SRSF6	94	94.753	ENSNGAG00000017560	Srsf6	95	93.210	Nannospalax_galili
ENSEASG00005023429	SRSF6	100	96.821	ENSNLEG00000006524	SRSF6	100	96.821	Nomascus_leucogenys
ENSEASG00005023429	SRSF6	54	94.624	ENSMEUG00000014615	SRSF6	62	95.745	Notamacropus_eugenii
ENSEASG00005023429	SRSF6	53	85.792	ENSONIG00000001925	-	54	71.795	Oreochromis_niloticus
ENSEASG00005023429	SRSF6	53	84.699	ENSONIG00000020247	-	53	84.783	Oreochromis_niloticus
ENSEASG00005023429	SRSF6	67	51.092	ENSOCUG00000023999	-	70	62.570	Oryctolagus_cuniculus
ENSEASG00005023429	SRSF6	54	71.569	ENSOCUG00000009785	-	64	76.289	Oryctolagus_cuniculus
ENSEASG00005023429	SRSF6	94	93.210	ENSOGAG00000014468	SRSF6	94	93.498	Otolemur_garnettii
ENSEASG00005023429	SRSF6	100	95.072	ENSOARG00000003117	SRSF6	100	95.072	Ovis_aries
ENSEASG00005023429	SRSF6	90	64.309	ENSPPAG00000043131	-	58	83.957	Pan_paniscus
ENSEASG00005023429	SRSF6	100	96.532	ENSPPAG00000034327	-	100	96.532	Pan_paniscus
ENSEASG00005023429	SRSF6	100	98.841	ENSPPRG00000008917	SRSF6	100	98.841	Panthera_pardus
ENSEASG00005023429	SRSF6	63	98.148	ENSPTIG00000019153	SRSF6	100	98.148	Panthera_tigris_altaica
ENSEASG00005023429	SRSF6	90	64.309	ENSPTRG00000046274	-	58	83.957	Pan_troglodytes
ENSEASG00005023429	SRSF6	100	96.532	ENSPTRG00000044686	-	100	96.532	Pan_troglodytes
ENSEASG00005023429	SRSF6	100	96.812	ENSPANG00000035224	SRSF6	100	96.812	Papio_anubis
ENSEASG00005023429	SRSF6	100	67.335	ENSPKIG00000018463	-	77	93.590	Paramormyrops_kingsleyae
ENSEASG00005023429	SRSF6	52	74.586	ENSPKIG00000015703	-	95	60.403	Paramormyrops_kingsleyae
ENSEASG00005023429	SRSF6	89	71.845	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSEASG00005023429	SRSF6	54	94.624	ENSPCIG00000003820	SRSF6	58	96.154	Phascolarctos_cinereus
ENSEASG00005023429	SRSF6	53	87.931	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSEASG00005023429	SRSF6	87	62.928	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSEASG00005023429	SRSF6	53	85.326	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSEASG00005023429	SRSF6	100	96.821	ENSPPYG00000011019	SRSF6	100	96.821	Pongo_abelii
ENSEASG00005023429	SRSF6	92	91.195	ENSPCAG00000010954	SRSF6	96	90.093	Procavia_capensis
ENSEASG00005023429	SRSF6	100	97.110	ENSPCOG00000026364	SRSF6	100	97.110	Propithecus_coquereli
ENSEASG00005023429	SRSF6	100	96.232	ENSPVAG00000015232	SRSF6	100	96.232	Pteropus_vampyrus
ENSEASG00005023429	SRSF6	53	88.525	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSEASG00005023429	SRSF6	94	95.988	ENSRNOG00000006380	Srsf6	95	95.062	Rattus_norvegicus
ENSEASG00005023429	SRSF6	100	95.072	ENSRBIG00000041414	SRSF6	100	95.072	Rhinopithecus_bieti
ENSEASG00005023429	SRSF6	100	96.812	ENSRROG00000029989	SRSF6	100	96.812	Rhinopithecus_roxellana
ENSEASG00005023429	SRSF6	93	65.625	ENSSBOG00000034078	-	54	76.243	Saimiri_boliviensis_boliviensis
ENSEASG00005023429	SRSF6	100	96.243	ENSSBOG00000033708	-	100	96.243	Saimiri_boliviensis_boliviensis
ENSEASG00005023429	SRSF6	54	94.624	ENSSHAG00000012805	SRSF6	55	95.745	Sarcophilus_harrisii
ENSEASG00005023429	SRSF6	89	65.774	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSEASG00005023429	SRSF6	53	80.769	ENSSMAG00000017447	-	55	80.435	Scophthalmus_maximus
ENSEASG00005023429	SRSF6	53	88.108	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSEASG00005023429	SRSF6	53	88.108	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSEASG00005023429	SRSF6	75	96.911	ENSSARG00000001602	SRSF6	100	96.911	Sorex_araneus
ENSEASG00005023429	SRSF6	53	93.989	ENSSPUG00000004967	SRSF6	94	69.659	Sphenodon_punctatus
ENSEASG00005023429	SRSF6	76	70.412	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSEASG00005023429	SRSF6	100	98.261	ENSSSCG00000007362	SRSF6	100	98.261	Sus_scrofa
ENSEASG00005023429	SRSF6	53	94.022	ENSTGUG00000003455	SRSF6	94	84.709	Taeniopygia_guttata
ENSEASG00005023429	SRSF6	87	70.297	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSEASG00005023429	SRSF6	85	92.466	ENSTBEG00000013448	SRSF6	92	72.852	Tupaia_belangeri
ENSEASG00005023429	SRSF6	75	97.683	ENSTTRG00000015410	SRSF6	100	97.683	Tursiops_truncatus
ENSEASG00005023429	SRSF6	100	98.841	ENSUAMG00000003559	SRSF6	100	98.841	Ursus_americanus
ENSEASG00005023429	SRSF6	63	98.148	ENSUMAG00000001154	SRSF6	100	98.148	Ursus_maritimus
ENSEASG00005023429	SRSF6	83	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos
ENSEASG00005023429	SRSF6	53	86.885	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus