EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEASG00005023434 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Equus_asinus_asinus
Status: putative
Strand: Minus strand
Length: 55403 bases
Position: chrPSZQ01003664.1:41357077-41412479
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEASP00005034336	Rif1_N	PF12231.8	3.7e-77	1	1
ENSEASP00005034338	Rif1_N	PF12231.8	3.8e-77	1	1
ENSEASP00005034335	Rif1_N	PF12231.8	3.8e-77	1	1
ENSEASP00005034340	Rif1_N	PF12231.8	1.5e-74	1	1
ENSEASP00005034341	Rif1_N	PF12231.8	2.1e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEAST00005037430	RIF1-205	6510	-	ENSEASP00005034341	2169 (aa)	-	-
ENSEAST00005037429	RIF1-204	7038	-	ENSEASP00005034340	2345 (aa)	-	-
ENSEAST00005037427	RIF1-203	7320	-	ENSEASP00005034338	2439 (aa)	-	-
ENSEAST00005037424	RIF1-201	7401	-	ENSEASP00005034335	2466 (aa)	-	-
ENSEAST00005037425	RIF1-202	7323	-	ENSEASP00005034336	2440 (aa)	-	-

Gene Model

Click here to download ENSEASG00005023434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEASG00005023434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEASG00005023434	RIF1	98	91.419	ENSG00000080345	RIF1	97	90.378	Homo_sapiens
ENSEASG00005023434	RIF1	57	66.776	ENSAPOG00000011073	rif1	55	66.776	Acanthochromis_polyacanthus
ENSEASG00005023434	RIF1	98	94.000	ENSAMEG00000008461	RIF1	96	90.661	Ailuropoda_melanoleuca
ENSEASG00005023434	RIF1	57	70.395	ENSACIG00000017765	rif1	59	70.395	Amphilophus_citrinellus
ENSEASG00005023434	RIF1	60	66.776	ENSAOCG00000017231	rif1	57	66.776	Amphiprion_ocellaris
ENSEASG00005023434	RIF1	61	66.337	ENSAPEG00000013228	rif1	60	66.337	Amphiprion_percula
ENSEASG00005023434	RIF1	75	65.132	ENSATEG00000022887	rif1	64	65.132	Anabas_testudineus
ENSEASG00005023434	RIF1	83	78.947	ENSAPLG00000007092	RIF1	90	74.924	Anas_platyrhynchos
ENSEASG00005023434	RIF1	80	63.199	ENSACAG00000003714	RIF1	90	58.857	Anolis_carolinensis
ENSEASG00005023434	RIF1	99	91.419	ENSANAG00000024840	RIF1	94	91.419	Aotus_nancymaae
ENSEASG00005023434	RIF1	65	65.823	ENSAMXG00000010910	rif1	62	65.823	Astyanax_mexicanus
ENSEASG00005023434	RIF1	95	98.077	ENSBTAG00000021020	RIF1	95	98.077	Bos_taurus
ENSEASG00005023434	RIF1	98	91.749	ENSCJAG00000003138	RIF1	93	92.453	Callithrix_jacchus
ENSEASG00005023434	RIF1	99	94.667	ENSCAFG00000005670	RIF1	90	94.667	Canis_familiaris
ENSEASG00005023434	RIF1	99	94.667	ENSCAFG00020016401	RIF1	93	94.667	Canis_lupus_dingo
ENSEASG00005023434	RIF1	99	96.040	ENSCHIG00000020327	RIF1	93	96.040	Capra_hircus
ENSEASG00005023434	RIF1	99	94.118	ENSTSYG00000008861	RIF1	93	94.118	Carlito_syrichta
ENSEASG00005023434	RIF1	78	79.070	ENSCAPG00000008957	RIF1	96	79.070	Cavia_aperea
ENSEASG00005023434	RIF1	99	85.342	ENSCPOG00000037898	RIF1	95	85.342	Cavia_porcellus
ENSEASG00005023434	RIF1	99	90.566	ENSCCAG00000024760	RIF1	92	90.566	Cebus_capucinus
ENSEASG00005023434	RIF1	98	92.079	ENSCATG00000033353	RIF1	96	87.949	Cercocebus_atys
ENSEASG00005023434	RIF1	98	93.233	ENSCLAG00000001517	RIF1	97	93.233	Chinchilla_lanigera
ENSEASG00005023434	RIF1	98	92.079	ENSCSAG00000016089	RIF1	96	87.852	Chlorocebus_sabaeus
ENSEASG00005023434	RIF1	96	92.308	ENSCHOG00000007187	RIF1	90	92.308	Choloepus_hoffmanni
ENSEASG00005023434	RIF1	84	81.250	ENSCPBG00000025885	RIF1	99	71.302	Chrysemys_picta_bellii
ENSEASG00005023434	RIF1	98	92.079	ENSCANG00000028962	RIF1	95	92.079	Colobus_angolensis_palliatus
ENSEASG00005023434	RIF1	98	87.622	ENSCGRG00001024589	Rif1	91	87.622	Cricetulus_griseus_chok1gshd
ENSEASG00005023434	RIF1	98	86.774	ENSCGRG00000010713	Rif1	93	86.774	Cricetulus_griseus_crigri
ENSEASG00005023434	RIF1	68	54.475	ENSCSEG00000003945	rif1	70	54.475	Cynoglossus_semilaevis
ENSEASG00005023434	RIF1	51	68.092	ENSCVAG00000022479	rif1	50	68.092	Cyprinodon_variegatus
ENSEASG00005023434	RIF1	62	51.180	ENSDARG00000062650	rif1	51	51.297	Danio_rerio
ENSEASG00005023434	RIF1	98	93.399	ENSDNOG00000011194	RIF1	89	93.399	Dasypus_novemcinctus
ENSEASG00005023434	RIF1	95	91.582	ENSETEG00000012421	RIF1	86	91.582	Echinops_telfairi
ENSEASG00005023434	RIF1	99	98.350	ENSECAG00000012679	RIF1	100	98.185	Equus_caballus
ENSEASG00005023434	RIF1	58	55.777	ENSELUG00000006826	rif1	56	49.841	Esox_lucius
ENSEASG00005023434	RIF1	99	94.667	ENSFCAG00000029742	RIF1	95	94.667	Felis_catus
ENSEASG00005023434	RIF1	78	87.634	ENSFALG00000013874	RIF1	95	87.634	Ficedula_albicollis
ENSEASG00005023434	RIF1	99	91.857	ENSFDAG00000006538	RIF1	95	91.857	Fukomys_damarensis
ENSEASG00005023434	RIF1	58	66.124	ENSFHEG00000013721	rif1	61	66.124	Fundulus_heteroclitus
ENSEASG00005023434	RIF1	52	66.885	ENSGMOG00000003517	rif1	75	66.885	Gadus_morhua
ENSEASG00005023434	RIF1	73	87.379	ENSGALG00000012484	RIF1	91	64.955	Gallus_gallus
ENSEASG00005023434	RIF1	64	69.180	ENSGAFG00000017196	rif1	69	68.852	Gambusia_affinis
ENSEASG00005023434	RIF1	52	67.541	ENSGACG00000008579	rif1	53	67.763	Gasterosteus_aculeatus
ENSEASG00005023434	RIF1	85	81.395	ENSGAGG00000012595	RIF1	90	81.395	Gopherus_agassizii
ENSEASG00005023434	RIF1	90	91.547	ENSGGOG00000040178	RIF1	100	91.535	Gorilla_gorilla
ENSEASG00005023434	RIF1	75	55.823	ENSHBUG00000007125	rif1	68	55.823	Haplochromis_burtoni
ENSEASG00005023434	RIF1	96	93.667	ENSHGLG00100009807	RIF1	95	93.667	Heterocephalus_glaber_male
ENSEASG00005023434	RIF1	51	67.213	ENSHCOG00000015943	rif1	60	48.585	Hippocampus_comes
ENSEASG00005023434	RIF1	57	64.458	ENSIPUG00000021703	rif1	57	64.458	Ictalurus_punctatus
ENSEASG00005023434	RIF1	99	87.342	ENSSTOG00000020712	RIF1	96	87.342	Ictidomys_tridecemlineatus
ENSEASG00005023434	RIF1	99	79.693	ENSJJAG00000023000	Rif1	98	79.238	Jaculus_jaculus
ENSEASG00005023434	RIF1	57	65.461	ENSKMAG00000002852	rif1	58	65.461	Kryptolebias_marmoratus
ENSEASG00005023434	RIF1	58	68.750	ENSLBEG00000023196	rif1	51	68.750	Labrus_bergylta
ENSEASG00005023434	RIF1	85	60.882	ENSLACG00000005425	RIF1	89	60.882	Latimeria_chalumnae
ENSEASG00005023434	RIF1	78	69.333	ENSLOCG00000002657	rif1	75	69.333	Lepisosteus_oculatus
ENSEASG00005023434	RIF1	99	88.462	ENSLAFG00000009796	RIF1	95	88.462	Loxodonta_africana
ENSEASG00005023434	RIF1	98	91.749	ENSMFAG00000032233	RIF1	96	87.755	Macaca_fascicularis
ENSEASG00005023434	RIF1	98	91.749	ENSMMUG00000008611	RIF1	96	87.755	Macaca_mulatta
ENSEASG00005023434	RIF1	98	91.749	ENSMNEG00000031616	RIF1	96	87.852	Macaca_nemestrina
ENSEASG00005023434	RIF1	98	92.079	ENSMLEG00000042945	RIF1	96	87.949	Mandrillus_leucophaeus
ENSEASG00005023434	RIF1	58	56.034	ENSMAMG00000001745	rif1	56	69.408	Mastacembelus_armatus
ENSEASG00005023434	RIF1	74	69.079	ENSMZEG00005020920	rif1	61	68.750	Maylandia_zebra
ENSEASG00005023434	RIF1	83	79.605	ENSMGAG00000012732	RIF1	93	79.605	Meleagris_gallopavo
ENSEASG00005023434	RIF1	95	88.858	ENSMAUG00000013158	Rif1	99	88.858	Mesocricetus_auratus
ENSEASG00005023434	RIF1	98	93.023	ENSMICG00000046127	RIF1	97	86.737	Microcebus_murinus
ENSEASG00005023434	RIF1	99	81.333	ENSMOCG00000009381	Rif1	96	81.333	Microtus_ochrogaster
ENSEASG00005023434	RIF1	50	67.105	ENSMMOG00000006519	rif1	64	50.323	Mola_mola
ENSEASG00005023434	RIF1	99	85.197	ENSMODG00000003703	RIF1	90	85.197	Monodelphis_domestica
ENSEASG00005023434	RIF1	51	66.776	ENSMALG00000016759	rif1	55	66.776	Monopterus_albus
ENSEASG00005023434	RIF1	98	89.667	MGP_CAROLIEiJ_G0023555	Rif1	91	89.667	Mus_caroli
ENSEASG00005023434	RIF1	98	87.622	ENSMUSG00000036202	Rif1	91	87.622	Mus_musculus
ENSEASG00005023434	RIF1	99	79.552	MGP_PahariEiJ_G0025006	Rif1	96	79.552	Mus_pahari
ENSEASG00005023434	RIF1	98	89.667	MGP_SPRETEiJ_G0024476	Rif1	91	89.667	Mus_spretus
ENSEASG00005023434	RIF1	98	93.333	ENSMPUG00000000371	RIF1	96	89.786	Mustela_putorius_furo
ENSEASG00005023434	RIF1	91	90.826	ENSMLUG00000003376	RIF1	97	90.826	Myotis_lucifugus
ENSEASG00005023434	RIF1	99	84.825	ENSNGAG00000009268	Rif1	96	84.825	Nannospalax_galili
ENSEASG00005023434	RIF1	59	68.092	ENSNBRG00000014257	rif1	61	68.092	Neolamprologus_brichardi
ENSEASG00005023434	RIF1	99	91.419	ENSNLEG00000010955	RIF1	95	91.419	Nomascus_leucogenys
ENSEASG00005023434	RIF1	72	93.130	ENSMEUG00000007601	-	74	93.130	Notamacropus_eugenii
ENSEASG00005023434	RIF1	99	83.553	ENSODEG00000003950	RIF1	95	82.736	Octodon_degus
ENSEASG00005023434	RIF1	59	68.750	ENSONIG00000013657	rif1	58	68.750	Oreochromis_niloticus
ENSEASG00005023434	RIF1	83	82.595	ENSOANG00000006078	-	79	82.595	Ornithorhynchus_anatinus
ENSEASG00005023434	RIF1	99	92.359	ENSOCUG00000017435	RIF1	95	91.749	Oryctolagus_cuniculus
ENSEASG00005023434	RIF1	57	62.866	ENSORLG00020001302	rif1	59	62.866	Oryzias_latipes_hni
ENSEASG00005023434	RIF1	57	62.866	ENSORLG00015000009	rif1	58	62.866	Oryzias_latipes_hsok
ENSEASG00005023434	RIF1	57	63.844	ENSOMEG00000021513	rif1	61	63.844	Oryzias_melastigma
ENSEASG00005023434	RIF1	99	92.409	ENSOGAG00000006141	RIF1	95	92.409	Otolemur_garnettii
ENSEASG00005023434	RIF1	99	96.040	ENSOARG00000008930	RIF1	93	96.040	Ovis_aries
ENSEASG00005023434	RIF1	98	91.089	ENSPPAG00000023754	RIF1	96	87.646	Pan_paniscus
ENSEASG00005023434	RIF1	99	95.302	ENSPPRG00000003618	RIF1	95	95.302	Panthera_pardus
ENSEASG00005023434	RIF1	99	95.302	ENSPTIG00000020652	RIF1	95	94.667	Panthera_tigris_altaica
ENSEASG00005023434	RIF1	98	91.089	ENSPTRG00000012534	RIF1	96	87.743	Pan_troglodytes
ENSEASG00005023434	RIF1	98	92.079	ENSPANG00000008525	RIF1	96	87.949	Papio_anubis
ENSEASG00005023434	RIF1	65	70.684	ENSPKIG00000004267	rif1	63	70.684	Paramormyrops_kingsleyae
ENSEASG00005023434	RIF1	58	66.007	ENSPMGG00000016141	rif1	71	66.007	Periophthalmus_magnuspinnatus
ENSEASG00005023434	RIF1	99	89.439	ENSPEMG00000000446	Rif1	96	89.439	Peromyscus_maniculatus_bairdii
ENSEASG00005023434	RIF1	98	86.184	ENSPCIG00000009185	RIF1	94	86.184	Phascolarctos_cinereus
ENSEASG00005023434	RIF1	51	74.603	ENSPFOG00000000554	-	57	72.637	Poecilia_formosa
ENSEASG00005023434	RIF1	56	68.197	ENSPFOG00000017804	rif1	57	68.197	Poecilia_formosa
ENSEASG00005023434	RIF1	58	67.869	ENSPLAG00000017945	rif1	61	67.320	Poecilia_latipinna
ENSEASG00005023434	RIF1	52	49.164	ENSPMEG00000006897	-	54	78.226	Poecilia_mexicana
ENSEASG00005023434	RIF1	60	65.287	ENSPREG00000018052	rif1	63	65.287	Poecilia_reticulata
ENSEASG00005023434	RIF1	98	91.749	ENSPPYG00000012846	RIF1	96	88.035	Pongo_abelii
ENSEASG00005023434	RIF1	83	82.353	ENSPCAG00000009032	RIF1	83	82.353	Procavia_capensis
ENSEASG00005023434	RIF1	98	92.739	ENSPCOG00000027888	RIF1	97	87.476	Propithecus_coquereli
ENSEASG00005023434	RIF1	92	93.399	ENSPVAG00000014276	RIF1	95	91.886	Pteropus_vampyrus
ENSEASG00005023434	RIF1	74	68.750	ENSPNYG00000012940	rif1	72	68.750	Pundamilia_nyererei
ENSEASG00005023434	RIF1	57	65.723	ENSPNAG00000016685	rif1	64	52.903	Pygocentrus_nattereri
ENSEASG00005023434	RIF1	99	87.948	ENSRNOG00000054901	Rif1	95	87.948	Rattus_norvegicus
ENSEASG00005023434	RIF1	98	92.079	ENSRBIG00000003704	RIF1	91	92.079	Rhinopithecus_bieti
ENSEASG00005023434	RIF1	98	92.079	ENSRROG00000028206	RIF1	96	87.949	Rhinopithecus_roxellana
ENSEASG00005023434	RIF1	97	92.857	ENSSBOG00000029530	RIF1	100	92.473	Saimiri_boliviensis_boliviensis
ENSEASG00005023434	RIF1	99	84.539	ENSSHAG00000018552	RIF1	96	87.500	Sarcophilus_harrisii
ENSEASG00005023434	RIF1	61	66.149	ENSSFOG00015021539	rif1	70	66.149	Scleropages_formosus
ENSEASG00005023434	RIF1	71	67.763	ENSSMAG00000011704	rif1	53	67.763	Scophthalmus_maximus
ENSEASG00005023434	RIF1	68	67.434	ENSSDUG00000015632	rif1	59	67.434	Seriola_dumerili
ENSEASG00005023434	RIF1	66	85.000	ENSSARG00000007161	-	64	85.000	Sorex_araneus
ENSEASG00005023434	RIF1	87	73.077	ENSSPUG00000003062	RIF1	94	73.077	Sphenodon_punctatus
ENSEASG00005023434	RIF1	99	94.667	ENSSSCG00000016395	RIF1	93	94.667	Sus_scrofa
ENSEASG00005023434	RIF1	52	66.447	ENSTRUG00000015808	rif1	70	49.488	Takifugu_rubripes
ENSEASG00005023434	RIF1	52	65.094	ENSTNIG00000011538	rif1	71	50.442	Tetraodon_nigroviridis
ENSEASG00005023434	RIF1	83	91.772	ENSTBEG00000016082	RIF1	82	91.772	Tupaia_belangeri
ENSEASG00005023434	RIF1	97	96.370	ENSTTRG00000011190	RIF1	97	90.263	Tursiops_truncatus
ENSEASG00005023434	RIF1	90	89.313	ENSUAMG00000026385	RIF1	97	89.231	Ursus_americanus
ENSEASG00005023434	RIF1	100	90.078	ENSUMAG00000000337	RIF1	99	91.918	Ursus_maritimus
ENSEASG00005023434	RIF1	98	93.069	ENSVPAG00000002162	RIF1	91	93.069	Vicugna_pacos
ENSEASG00005023434	RIF1	99	95.000	ENSVVUG00000011293	RIF1	93	95.000	Vulpes_vulpes
ENSEASG00005023434	RIF1	81	64.706	ENSXETG00000004530	rif1	78	64.706	Xenopus_tropicalis
ENSEASG00005023434	RIF1	62	48.193	ENSXMAG00000000506	rif1	64	48.400	Xiphophorus_maculatus