EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000000386 (Gene tree)
Gene ID: -
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP 40 subunit
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 28804 bases
Position: chrFYBX02010737.1:267418-296221
Accession: ZDB-GENE-040625-161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000000147	Ribonuc_P_40	PF08584.11	6.6e-79	1	1
ENSEBUP00000000134	Ribonuc_P_40	PF08584.11	7.4e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000000436	-	3465	-	ENSEBUP00000000147	325 (aa)	-	-
ENSEBUT00000000423	-	3639	-	ENSEBUP00000000134	359 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000000386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000000386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000000386	rpp40	99	43.662	ENSG00000124787	RPP40	98	43.662	Homo_sapiens
ENSEBUG00000000386	rpp40	99	44.507	ENSAMEG00000012938	RPP40	98	44.507	Ailuropoda_melanoleuca
ENSEBUG00000000386	rpp40	99	37.072	ENSACIG00000003617	rpp40	98	36.620	Amphilophus_citrinellus
ENSEBUG00000000386	rpp40	99	37.695	ENSAOCG00000011846	rpp40	98	36.338	Amphiprion_ocellaris
ENSEBUG00000000386	rpp40	99	37.695	ENSAPEG00000001322	rpp40	98	36.338	Amphiprion_percula
ENSEBUG00000000386	rpp40	99	37.152	ENSATEG00000006584	rpp40	98	37.815	Anabas_testudineus
ENSEBUG00000000386	rpp40	91	45.946	ENSAPLG00000005691	RPP40	98	45.946	Anas_platyrhynchos
ENSEBUG00000000386	rpp40	99	44.548	ENSACAG00000006550	RPP40	87	44.507	Anolis_carolinensis
ENSEBUG00000000386	rpp40	99	43.662	ENSANAG00000029246	RPP40	98	43.662	Aotus_nancymaae
ENSEBUG00000000386	rpp40	98	37.736	ENSACLG00000015883	rpp40	96	37.216	Astatotilapia_calliptera
ENSEBUG00000000386	rpp40	99	42.737	ENSAMXG00000001755	rpp40	98	42.737	Astyanax_mexicanus
ENSEBUG00000000386	rpp40	99	45.070	ENSBTAG00000003332	RPP40	98	45.070	Bos_taurus
ENSEBUG00000000386	rpp40	99	43.380	ENSCJAG00000021373	RPP40	98	43.380	Callithrix_jacchus
ENSEBUG00000000386	rpp40	99	44.225	ENSCAFG00000009435	RPP40	98	44.225	Canis_familiaris
ENSEBUG00000000386	rpp40	99	44.225	ENSCAFG00020013380	RPP40	98	44.225	Canis_lupus_dingo
ENSEBUG00000000386	rpp40	99	45.352	ENSCHIG00000016849	RPP40	98	45.352	Capra_hircus
ENSEBUG00000000386	rpp40	99	44.789	ENSTSYG00000032857	RPP40	98	44.789	Carlito_syrichta
ENSEBUG00000000386	rpp40	98	40.312	ENSCAPG00000004957	RPP40	97	40.308	Cavia_aperea
ENSEBUG00000000386	rpp40	99	44.507	ENSCPOG00000005855	RPP40	98	44.507	Cavia_porcellus
ENSEBUG00000000386	rpp40	99	43.662	ENSCCAG00000019809	RPP40	98	43.662	Cebus_capucinus
ENSEBUG00000000386	rpp40	99	43.944	ENSCATG00000038787	RPP40	98	43.944	Cercocebus_atys
ENSEBUG00000000386	rpp40	99	43.944	ENSCLAG00000003235	RPP40	98	43.944	Chinchilla_lanigera
ENSEBUG00000000386	rpp40	99	43.662	ENSCSAG00000007307	RPP40	98	43.662	Chlorocebus_sabaeus
ENSEBUG00000000386	rpp40	76	35.628	ENSCHOG00000005856	-	96	34.855	Choloepus_hoffmanni
ENSEBUG00000000386	rpp40	99	44.548	ENSCPBG00000009003	RPP40	98	44.507	Chrysemys_picta_bellii
ENSEBUG00000000386	rpp40	99	43.662	ENSCANG00000033965	RPP40	98	43.662	Colobus_angolensis_palliatus
ENSEBUG00000000386	rpp40	98	44.444	ENSCGRG00001018328	Rpp40	97	44.444	Cricetulus_griseus_chok1gshd
ENSEBUG00000000386	rpp40	98	44.444	ENSCGRG00000011344	Rpp40	97	44.444	Cricetulus_griseus_crigri
ENSEBUG00000000386	rpp40	99	33.540	ENSCSEG00000015006	-	99	34.358	Cynoglossus_semilaevis
ENSEBUG00000000386	rpp40	82	33.457	ENSCVAG00000012169	rpp40	99	33.457	Cyprinodon_variegatus
ENSEBUG00000000386	rpp40	99	46.067	ENSDARG00000017605	rpp40	98	46.067	Danio_rerio
ENSEBUG00000000386	rpp40	81	43.643	ENSDNOG00000048136	RPP40	98	43.643	Dasypus_novemcinctus
ENSEBUG00000000386	rpp40	99	35.342	ENSDORG00000011196	-	98	35.342	Dipodomys_ordii
ENSEBUG00000000386	rpp40	99	44.789	ENSDORG00000029944	-	98	44.789	Dipodomys_ordii
ENSEBUG00000000386	rpp40	99	33.239	ENSETEG00000007458	RPP40	98	33.239	Echinops_telfairi
ENSEBUG00000000386	rpp40	99	44.507	ENSEASG00005012116	RPP40	78	44.507	Equus_asinus_asinus
ENSEBUG00000000386	rpp40	99	44.789	ENSECAG00000017247	RPP40	78	44.789	Equus_caballus
ENSEBUG00000000386	rpp40	81	34.471	ENSEEUG00000012087	RPP40	97	34.471	Erinaceus_europaeus
ENSEBUG00000000386	rpp40	99	44.272	ENSELUG00000017004	rpp40	99	44.722	Esox_lucius
ENSEBUG00000000386	rpp40	99	44.507	ENSFCAG00000009249	RPP40	98	44.507	Felis_catus
ENSEBUG00000000386	rpp40	95	43.827	ENSFALG00000013166	RPP40	99	43.827	Ficedula_albicollis
ENSEBUG00000000386	rpp40	99	44.507	ENSFDAG00000013001	-	98	44.507	Fukomys_damarensis
ENSEBUG00000000386	rpp40	90	35.052	ENSFDAG00000000265	-	99	35.052	Fukomys_damarensis
ENSEBUG00000000386	rpp40	99	38.028	ENSFHEG00000021429	rpp40	88	37.746	Fundulus_heteroclitus
ENSEBUG00000000386	rpp40	98	37.500	ENSGMOG00000018653	rpp40	99	37.500	Gadus_morhua
ENSEBUG00000000386	rpp40	99	46.106	ENSGALG00000036074	RPP40	98	45.352	Gallus_gallus
ENSEBUG00000000386	rpp40	91	33.446	ENSGAFG00000004189	-	97	33.446	Gambusia_affinis
ENSEBUG00000000386	rpp40	99	38.629	ENSGACG00000002472	rpp40	98	38.028	Gasterosteus_aculeatus
ENSEBUG00000000386	rpp40	99	44.892	ENSGAGG00000012918	RPP40	98	44.818	Gopherus_agassizii
ENSEBUG00000000386	rpp40	99	43.944	ENSGGOG00000013764	RPP40	98	43.944	Gorilla_gorilla
ENSEBUG00000000386	rpp40	99	35.692	ENSHBUG00000009378	rpp40	97	34.593	Haplochromis_burtoni
ENSEBUG00000000386	rpp40	99	44.789	ENSHGLG00000004871	RPP40	98	44.789	Heterocephalus_glaber_female
ENSEBUG00000000386	rpp40	99	44.789	ENSHGLG00100002080	RPP40	98	44.789	Heterocephalus_glaber_male
ENSEBUG00000000386	rpp40	96	36.741	ENSHCOG00000013264	-	91	35.965	Hippocampus_comes
ENSEBUG00000000386	rpp40	99	44.011	ENSIPUG00000008951	RPP40	99	43.175	Ictalurus_punctatus
ENSEBUG00000000386	rpp40	99	44.789	ENSSTOG00000011199	RPP40	98	44.789	Ictidomys_tridecemlineatus
ENSEBUG00000000386	rpp40	99	44.507	ENSJJAG00000020629	Rpp40	98	44.507	Jaculus_jaculus
ENSEBUG00000000386	rpp40	99	33.956	ENSKMAG00000019358	rpp40	98	33.521	Kryptolebias_marmoratus
ENSEBUG00000000386	rpp40	99	37.383	ENSLBEG00000022724	rpp40	98	37.183	Labrus_bergylta
ENSEBUG00000000386	rpp40	99	43.017	ENSLACG00000014848	RPP40	98	43.380	Latimeria_chalumnae
ENSEBUG00000000386	rpp40	99	46.479	ENSLOCG00000011650	rpp40	98	46.479	Lepisosteus_oculatus
ENSEBUG00000000386	rpp40	91	43.098	ENSLAFG00000007530	RPP40	98	43.098	Loxodonta_africana
ENSEBUG00000000386	rpp40	99	43.099	ENSMFAG00000043100	RPP40	98	43.099	Macaca_fascicularis
ENSEBUG00000000386	rpp40	99	43.380	ENSMMUG00000004966	RPP40	98	43.380	Macaca_mulatta
ENSEBUG00000000386	rpp40	99	43.380	ENSMNEG00000041986	RPP40	99	42.667	Macaca_nemestrina
ENSEBUG00000000386	rpp40	99	37.908	ENSMLEG00000040851	RPP40	99	47.059	Mandrillus_leucophaeus
ENSEBUG00000000386	rpp40	99	38.629	ENSMAMG00000019551	rpp40	98	38.028	Mastacembelus_armatus
ENSEBUG00000000386	rpp40	99	38.006	ENSMZEG00005019475	rpp40	98	37.465	Maylandia_zebra
ENSEBUG00000000386	rpp40	98	47.812	ENSMGAG00000004009	RPP40	89	47.812	Meleagris_gallopavo
ENSEBUG00000000386	rpp40	99	45.352	ENSMAUG00000010268	Rpp40	98	45.352	Mesocricetus_auratus
ENSEBUG00000000386	rpp40	99	46.479	ENSMICG00000003297	RPP40	98	43.662	Microcebus_murinus
ENSEBUG00000000386	rpp40	99	45.915	ENSMOCG00000000305	Rpp40	98	45.915	Microtus_ochrogaster
ENSEBUG00000000386	rpp40	99	32.676	ENSMMOG00000020591	-	98	32.676	Mola_mola
ENSEBUG00000000386	rpp40	99	44.101	ENSMODG00000009826	RPP40	98	44.101	Monodelphis_domestica
ENSEBUG00000000386	rpp40	99	37.072	ENSMALG00000020133	rpp40	99	36.943	Monopterus_albus
ENSEBUG00000000386	rpp40	99	46.197	MGP_CAROLIEiJ_G0018429	Rpp40	98	46.197	Mus_caroli
ENSEBUG00000000386	rpp40	99	45.915	ENSMUSG00000021418	Rpp40	98	45.915	Mus_musculus
ENSEBUG00000000386	rpp40	99	46.197	MGP_PahariEiJ_G0019497	Rpp40	98	46.197	Mus_pahari
ENSEBUG00000000386	rpp40	99	45.915	MGP_SPRETEiJ_G0019309	Rpp40	98	45.915	Mus_spretus
ENSEBUG00000000386	rpp40	99	44.789	ENSMPUG00000000530	RPP40	91	44.789	Mustela_putorius_furo
ENSEBUG00000000386	rpp40	99	43.662	ENSMLUG00000000501	RPP40	98	43.662	Myotis_lucifugus
ENSEBUG00000000386	rpp40	94	39.941	ENSNGAG00000022529	-	97	39.941	Nannospalax_galili
ENSEBUG00000000386	rpp40	99	44.507	ENSNGAG00000023955	-	98	44.507	Nannospalax_galili
ENSEBUG00000000386	rpp40	98	32.710	ENSNBRG00000017465	rpp40	86	32.923	Neolamprologus_brichardi
ENSEBUG00000000386	rpp40	99	43.380	ENSNLEG00000034397	RPP40	98	43.380	Nomascus_leucogenys
ENSEBUG00000000386	rpp40	99	39.437	ENSMEUG00000005300	RPP40	98	39.437	Notamacropus_eugenii
ENSEBUG00000000386	rpp40	99	41.972	ENSODEG00000018153	-	98	41.972	Octodon_degus
ENSEBUG00000000386	rpp40	99	45.070	ENSODEG00000007255	-	98	45.070	Octodon_degus
ENSEBUG00000000386	rpp40	98	40.625	ENSODEG00000006170	-	99	40.312	Octodon_degus
ENSEBUG00000000386	rpp40	99	36.449	ENSONIG00000014016	rpp40	98	36.056	Oreochromis_niloticus
ENSEBUG00000000386	rpp40	91	44.631	ENSOANG00000001200	RPP40	98	44.631	Ornithorhynchus_anatinus
ENSEBUG00000000386	rpp40	99	44.410	ENSOCUG00000000354	RPP40	98	43.258	Oryctolagus_cuniculus
ENSEBUG00000000386	rpp40	99	35.475	ENSORLG00000008242	-	99	35.475	Oryzias_latipes
ENSEBUG00000000386	rpp40	99	35.826	ENSORLG00020013745	-	87	36.311	Oryzias_latipes_hni
ENSEBUG00000000386	rpp40	99	36.034	ENSORLG00015000887	-	99	36.034	Oryzias_latipes_hsok
ENSEBUG00000000386	rpp40	99	36.137	ENSOMEG00000002747	rpp40	99	36.034	Oryzias_melastigma
ENSEBUG00000000386	rpp40	99	45.915	ENSOGAG00000006055	RPP40	98	45.915	Otolemur_garnettii
ENSEBUG00000000386	rpp40	98	44.410	ENSOARG00000018783	RPP40	98	44.781	Ovis_aries
ENSEBUG00000000386	rpp40	99	43.662	ENSPPAG00000023703	RPP40	98	43.662	Pan_paniscus
ENSEBUG00000000386	rpp40	99	44.225	ENSPPRG00000005612	RPP40	98	44.225	Panthera_pardus
ENSEBUG00000000386	rpp40	99	40.563	ENSPTIG00000018847	RPP40	98	40.563	Panthera_tigris_altaica
ENSEBUG00000000386	rpp40	99	43.944	ENSPTRG00000017690	RPP40	98	43.944	Pan_troglodytes
ENSEBUG00000000386	rpp40	99	43.099	ENSPANG00000017865	RPP40	98	43.099	Papio_anubis
ENSEBUG00000000386	rpp40	99	43.539	ENSPKIG00000006311	rpp40	98	43.539	Paramormyrops_kingsleyae
ENSEBUG00000000386	rpp40	68	40.909	ENSPSIG00000007854	RPP40	99	40.909	Pelodiscus_sinensis
ENSEBUG00000000386	rpp40	94	39.344	ENSPEMG00000020809	Rpp40	91	37.612	Peromyscus_maniculatus_bairdii
ENSEBUG00000000386	rpp40	84	50.549	ENSPMAG00000008412	rpp40	99	50.549	Petromyzon_marinus
ENSEBUG00000000386	rpp40	99	44.225	ENSPCIG00000010682	RPP40	98	44.225	Phascolarctos_cinereus
ENSEBUG00000000386	rpp40	99	33.746	ENSPFOG00000011460	rpp40	95	33.811	Poecilia_formosa
ENSEBUG00000000386	rpp40	99	33.333	ENSPLAG00000001334	rpp40	96	34.006	Poecilia_latipinna
ENSEBUG00000000386	rpp40	99	34.268	ENSPMEG00000007721	rpp40	96	34.870	Poecilia_mexicana
ENSEBUG00000000386	rpp40	99	34.891	ENSPREG00000009215	rpp40	96	35.447	Poecilia_reticulata
ENSEBUG00000000386	rpp40	99	43.662	ENSPPYG00000016194	RPP40	98	43.662	Pongo_abelii
ENSEBUG00000000386	rpp40	99	45.915	ENSPCOG00000003907	RPP40	98	45.915	Propithecus_coquereli
ENSEBUG00000000386	rpp40	99	44.225	ENSPVAG00000011325	RPP40	98	44.225	Pteropus_vampyrus
ENSEBUG00000000386	rpp40	91	35.000	ENSPNYG00000004432	rpp40	98	35.000	Pundamilia_nyererei
ENSEBUG00000000386	rpp40	99	42.857	ENSPNAG00000019125	rpp40	96	43.103	Pygocentrus_nattereri
ENSEBUG00000000386	rpp40	99	45.352	ENSRNOG00000016226	Rpp40	99	44.667	Rattus_norvegicus
ENSEBUG00000000386	rpp40	99	43.380	ENSRBIG00000035800	RPP40	99	42.667	Rhinopithecus_bieti
ENSEBUG00000000386	rpp40	99	43.380	ENSRROG00000039116	RPP40	98	43.380	Rhinopithecus_roxellana
ENSEBUG00000000386	rpp40	99	43.662	ENSSBOG00000020297	RPP40	98	43.662	Saimiri_boliviensis_boliviensis
ENSEBUG00000000386	rpp40	85	42.391	ENSSHAG00000002102	RPP40	99	42.391	Sarcophilus_harrisii
ENSEBUG00000000386	rpp40	99	44.720	ENSSFOG00015001142	rpp40	80	44.663	Scleropages_formosus
ENSEBUG00000000386	rpp40	99	38.006	ENSSDUG00000007202	rpp40	98	37.746	Seriola_dumerili
ENSEBUG00000000386	rpp40	99	38.006	ENSSLDG00000017563	rpp40	98	37.746	Seriola_lalandi_dorsalis
ENSEBUG00000000386	rpp40	99	44.548	ENSSPUG00000017487	-	98	44.225	Sphenodon_punctatus
ENSEBUG00000000386	rpp40	90	42.662	ENSSPUG00000018950	-	99	42.662	Sphenodon_punctatus
ENSEBUG00000000386	rpp40	99	38.199	ENSSPAG00000022716	rpp40	98	37.360	Stegastes_partitus
ENSEBUG00000000386	rpp40	99	45.352	ENSSSCG00000000998	RPP40	98	45.352	Sus_scrofa
ENSEBUG00000000386	rpp40	52	44.118	ENSTGUG00000015246	-	96	44.118	Taeniopygia_guttata
ENSEBUG00000000386	rpp40	99	45.171	ENSTGUG00000002258	-	99	43.662	Taeniopygia_guttata
ENSEBUG00000000386	rpp40	99	39.875	ENSTRUG00000003755	rpp40	99	39.385	Takifugu_rubripes
ENSEBUG00000000386	rpp40	99	39.564	ENSTNIG00000003077	rpp40	97	39.601	Tetraodon_nigroviridis
ENSEBUG00000000386	rpp40	76	31.174	ENSTBEG00000014467	-	70	30.290	Tupaia_belangeri
ENSEBUG00000000386	rpp40	99	41.408	ENSTTRG00000007319	RPP40	98	41.408	Tursiops_truncatus
ENSEBUG00000000386	rpp40	99	44.507	ENSUAMG00000002159	RPP40	98	44.507	Ursus_americanus
ENSEBUG00000000386	rpp40	99	44.507	ENSUMAG00000018639	RPP40	92	44.507	Ursus_maritimus
ENSEBUG00000000386	rpp40	79	35.547	ENSVPAG00000004652	-	89	35.547	Vicugna_pacos
ENSEBUG00000000386	rpp40	99	44.225	ENSVVUG00000005451	RPP40	98	44.225	Vulpes_vulpes
ENSEBUG00000000386	rpp40	99	41.226	ENSXETG00000017617	rpp40	98	41.226	Xenopus_tropicalis
ENSEBUG00000000386	rpp40	54	47.423	ENSXCOG00000019991	-	58	41.667	Xiphophorus_couchianus