EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000000404 (Gene tree)
Gene ID: -
Gene Symbol: gtpbp6
Alias: fc56b07|wu:fc56b07|wu:fl82e09
Full Name: GTP binding protein 6 (putative)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 34127 bases
Position: chrFYBX02009696.1:2436809-2470935
Accession: ZDB-GENE-031118-62
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000000160	MMR_HSR1	PF01926.23	4.1e-14	1	1
ENSEBUP00000000179	MMR_HSR1	PF01926.23	4.4e-14	1	1
ENSEBUP00000000198	MMR_HSR1	PF01926.23	4.4e-14	1	1
ENSEBUP00000000215	MMR_HSR1	PF01926.23	4.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000000468	-	5711	-	ENSEBUP00000000179	554 (aa)	-	-
ENSEBUT00000000505	-	5545	-	ENSEBUP00000000215	554 (aa)	-	-
ENSEBUT00000000449	-	5820	-	ENSEBUP00000000160	527 (aa)	-	-
ENSEBUT00000000487	-	5598	-	ENSEBUP00000000198	554 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000000404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000000404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000000404	gtpbp6	78	49.192	ENSG00000178605	GTPBP6	91	46.875	Homo_sapiens
ENSEBUG00000000404	gtpbp6	75	51.313	ENSAPOG00000001396	gtpbp6	78	51.313	Acanthochromis_polyacanthus
ENSEBUG00000000404	gtpbp6	78	48.276	ENSAMEG00000001958	GTPBP6	99	47.059	Ailuropoda_melanoleuca
ENSEBUG00000000404	gtpbp6	77	49.754	ENSACIG00000001694	gtpbp6	72	51.302	Amphilophus_citrinellus
ENSEBUG00000000404	gtpbp6	76	50.237	ENSAOCG00000014817	gtpbp6	79	50.237	Amphiprion_ocellaris
ENSEBUG00000000404	gtpbp6	76	50.474	ENSAPEG00000017894	gtpbp6	79	50.474	Amphiprion_percula
ENSEBUG00000000404	gtpbp6	76	50.000	ENSATEG00000012768	gtpbp6	79	50.000	Anabas_testudineus
ENSEBUG00000000404	gtpbp6	73	50.746	ENSAPLG00000005592	GTPBP6	98	50.746	Anas_platyrhynchos
ENSEBUG00000000404	gtpbp6	76	51.300	ENSACAG00000011834	GTPBP6	90	48.414	Anolis_carolinensis
ENSEBUG00000000404	gtpbp6	82	49.244	ENSACLG00000002216	gtpbp6	79	50.948	Astatotilapia_calliptera
ENSEBUG00000000404	gtpbp6	83	47.966	ENSAMXG00000012493	gtpbp6	85	50.594	Astyanax_mexicanus
ENSEBUG00000000404	gtpbp6	78	48.037	ENSBTAG00000054315	GTPBP6	92	45.806	Bos_taurus
ENSEBUG00000000404	gtpbp6	62	54.046	ENSCJAG00000013056	GTPBP6	97	54.046	Callithrix_jacchus
ENSEBUG00000000404	gtpbp6	78	48.961	ENSCAFG00000010931	GTPBP6	87	48.268	Canis_familiaris
ENSEBUG00000000404	gtpbp6	78	48.961	ENSCAFG00020010766	-	87	48.268	Canis_lupus_dingo
ENSEBUG00000000404	gtpbp6	78	48.961	ENSCAFG00020001279	-	87	48.268	Canis_lupus_dingo
ENSEBUG00000000404	gtpbp6	78	48.037	ENSCHIG00000000121	GTPBP6	87	46.522	Capra_hircus
ENSEBUG00000000404	gtpbp6	78	49.192	ENSCCAG00000032874	GTPBP6	91	46.875	Cebus_capucinus
ENSEBUG00000000404	gtpbp6	78	48.961	ENSCATG00000024945	GTPBP6	91	46.667	Cercocebus_atys
ENSEBUG00000000404	gtpbp6	77	49.882	ENSCPBG00000007520	GTPBP6	88	47.845	Chrysemys_picta_bellii
ENSEBUG00000000404	gtpbp6	72	39.651	ENSCING00000012867	-	77	39.651	Ciona_intestinalis
ENSEBUG00000000404	gtpbp6	70	35.800	ENSCSAVG00000009232	-	97	35.800	Ciona_savignyi
ENSEBUG00000000404	gtpbp6	77	48.122	ENSCGRG00001022411	Gtpbp6	97	45.473	Cricetulus_griseus_chok1gshd
ENSEBUG00000000404	gtpbp6	72	49.500	ENSCGRG00000007715	Gtpbp6	92	49.500	Cricetulus_griseus_crigri
ENSEBUG00000000404	gtpbp6	84	46.709	ENSCSEG00000007271	gtpbp6	90	46.882	Cynoglossus_semilaevis
ENSEBUG00000000404	gtpbp6	76	51.422	ENSCVAG00000015417	gtpbp6	82	51.422	Cyprinodon_variegatus
ENSEBUG00000000404	gtpbp6	82	48.696	ENSDARG00000061091	gtpbp6	85	48.696	Danio_rerio
ENSEBUG00000000404	gtpbp6	63	42.943	ENSDNOG00000039508	GTPBP6	91	40.394	Dasypus_novemcinctus
ENSEBUG00000000404	gtpbp6	88	35.317	FBgn0039339	CG5116	96	35.317	Drosophila_melanogaster
ENSEBUG00000000404	gtpbp6	75	49.367	ENSEASG00005007092	-	54	49.180	Equus_asinus_asinus
ENSEBUG00000000404	gtpbp6	78	49.423	ENSECAG00000032734	GTPBP6	87	48.578	Equus_caballus
ENSEBUG00000000404	gtpbp6	73	49.877	ENSELUG00000016376	gtpbp6	79	48.636	Esox_lucius
ENSEBUG00000000404	gtpbp6	78	44.966	ENSFCAG00000013263	-	90	45.085	Felis_catus
ENSEBUG00000000404	gtpbp6	78	45.538	ENSFCAG00000010310	-	98	50.407	Felis_catus
ENSEBUG00000000404	gtpbp6	77	50.698	ENSFALG00000004133	GTPBP6	95	49.142	Ficedula_albicollis
ENSEBUG00000000404	gtpbp6	81	50.221	ENSFHEG00000012018	gtpbp6	87	49.558	Fundulus_heteroclitus
ENSEBUG00000000404	gtpbp6	72	51.122	ENSGMOG00000004778	gtpbp6	98	51.122	Gadus_morhua
ENSEBUG00000000404	gtpbp6	71	51.010	ENSGALG00000016717	GTPBP6	98	51.010	Gallus_gallus
ENSEBUG00000000404	gtpbp6	76	51.781	ENSGAFG00000018158	gtpbp6	85	48.073	Gambusia_affinis
ENSEBUG00000000404	gtpbp6	73	50.617	ENSGACG00000013857	gtpbp6	99	50.617	Gasterosteus_aculeatus
ENSEBUG00000000404	gtpbp6	75	51.449	ENSGAGG00000021606	GTPBP6	79	51.449	Gopherus_agassizii
ENSEBUG00000000404	gtpbp6	52	52.098	ENSGGOG00000002792	-	99	52.098	Gorilla_gorilla
ENSEBUG00000000404	gtpbp6	82	49.237	ENSHBUG00000013113	gtpbp6	86	48.584	Haplochromis_burtoni
ENSEBUG00000000404	gtpbp6	78	48.037	ENSHGLG00000000207	GTPBP6	88	47.186	Heterocephalus_glaber_female
ENSEBUG00000000404	gtpbp6	68	51.111	ENSHGLG00100000320	GTPBP6	100	51.111	Heterocephalus_glaber_male
ENSEBUG00000000404	gtpbp6	52	50.000	ENSHCOG00000012544	gtpbp6	91	49.825	Hippocampus_comes
ENSEBUG00000000404	gtpbp6	76	50.119	ENSIPUG00000022531	gtpbp6	77	50.119	Ictalurus_punctatus
ENSEBUG00000000404	gtpbp6	79	47.032	ENSKMAG00000016464	gtpbp6	88	46.753	Kryptolebias_marmoratus
ENSEBUG00000000404	gtpbp6	76	50.118	ENSLBEG00000024203	gtpbp6	90	47.158	Labrus_bergylta
ENSEBUG00000000404	gtpbp6	79	52.055	ENSLACG00000012754	GTPBP6	84	50.323	Latimeria_chalumnae
ENSEBUG00000000404	gtpbp6	83	46.667	ENSLOCG00000008009	gtpbp6	95	46.452	Lepisosteus_oculatus
ENSEBUG00000000404	gtpbp6	78	48.268	ENSMFAG00000041568	GTPBP6	91	46.042	Macaca_fascicularis
ENSEBUG00000000404	gtpbp6	78	40.647	ENSMNEG00000039609	GTPBP6	91	39.167	Macaca_nemestrina
ENSEBUG00000000404	gtpbp6	76	49.881	ENSMAMG00000012631	gtpbp6	91	46.875	Mastacembelus_armatus
ENSEBUG00000000404	gtpbp6	82	49.244	ENSMZEG00005002869	gtpbp6	86	48.584	Maylandia_zebra
ENSEBUG00000000404	gtpbp6	69	50.824	ENSMGAG00000014752	GTPBP6	94	49.738	Meleagris_gallopavo
ENSEBUG00000000404	gtpbp6	89	45.020	ENSMMOG00000005950	gtpbp6	96	44.622	Mola_mola
ENSEBUG00000000404	gtpbp6	76	48.227	ENSMODG00000000326	GTPBP6	96	47.778	Monodelphis_domestica
ENSEBUG00000000404	gtpbp6	76	49.406	ENSMALG00000014993	gtpbp6	91	45.585	Monopterus_albus
ENSEBUG00000000404	gtpbp6	76	49.052	MGP_CAROLIEiJ_G0027536	Gtpbp6	90	47.246	Mus_caroli
ENSEBUG00000000404	gtpbp6	76	49.406	ENSMUSG00000033434	Gtpbp6	90	47.669	Mus_musculus
ENSEBUG00000000404	gtpbp6	76	49.406	MGP_SPRETEiJ_G0028534	Gtpbp6	90	47.669	Mus_spretus
ENSEBUG00000000404	gtpbp6	72	49.624	ENSMPUG00000001536	GTPBP6	85	49.624	Mustela_putorius_furo
ENSEBUG00000000404	gtpbp6	78	49.425	ENSNGAG00000011609	Gtpbp6	87	48.667	Nannospalax_galili
ENSEBUG00000000404	gtpbp6	82	49.565	ENSNBRG00000017629	gtpbp6	85	48.904	Neolamprologus_brichardi
ENSEBUG00000000404	gtpbp6	54	49.825	ENSMEUG00000001355	-	90	45.349	Notamacropus_eugenii
ENSEBUG00000000404	gtpbp6	72	48.622	ENSODEG00000001052	GTPBP6	92	44.842	Octodon_degus
ENSEBUG00000000404	gtpbp6	82	49.561	ENSONIG00000007330	gtpbp6	80	51.185	Oreochromis_niloticus
ENSEBUG00000000404	gtpbp6	79	42.664	ENSOANG00000007007	-	94	42.857	Ornithorhynchus_anatinus
ENSEBUG00000000404	gtpbp6	78	49.192	ENSOCUG00000008245	GTPBP6	83	49.415	Oryctolagus_cuniculus
ENSEBUG00000000404	gtpbp6	84	47.246	ENSORLG00000016077	gtpbp6	81	50.355	Oryzias_latipes
ENSEBUG00000000404	gtpbp6	84	47.246	ENSORLG00020018687	gtpbp6	81	50.355	Oryzias_latipes_hni
ENSEBUG00000000404	gtpbp6	84	47.669	ENSORLG00015014255	gtpbp6	81	50.827	Oryzias_latipes_hsok
ENSEBUG00000000404	gtpbp6	80	49.888	ENSOMEG00000004496	gtpbp6	81	51.300	Oryzias_melastigma
ENSEBUG00000000404	gtpbp6	78	48.157	ENSOGAG00000011327	GTPBP6	99	47.216	Otolemur_garnettii
ENSEBUG00000000404	gtpbp6	72	46.667	ENSOARG00000000946	GTPBP6	98	46.914	Ovis_aries
ENSEBUG00000000404	gtpbp6	70	51.081	ENSPPAG00000028400	-	85	50.259	Pan_paniscus
ENSEBUG00000000404	gtpbp6	77	40.093	ENSPPRG00000006710	-	87	38.627	Panthera_pardus
ENSEBUG00000000404	gtpbp6	78	44.749	ENSPPRG00000004932	-	90	43.284	Panthera_pardus
ENSEBUG00000000404	gtpbp6	78	49.423	ENSPTRG00000050696	GTPBP6	91	47.083	Pan_troglodytes
ENSEBUG00000000404	gtpbp6	78	46.651	ENSPANG00000011580	GTPBP6	91	44.583	Papio_anubis
ENSEBUG00000000404	gtpbp6	81	51.648	ENSPKIG00000022514	gtpbp6	81	50.769	Paramormyrops_kingsleyae
ENSEBUG00000000404	gtpbp6	73	53.980	ENSPSIG00000013117	GTPBP6	99	53.980	Pelodiscus_sinensis
ENSEBUG00000000404	gtpbp6	72	49.875	ENSPMAG00000006496	gtpbp6	99	49.875	Petromyzon_marinus
ENSEBUG00000000404	gtpbp6	77	48.471	ENSPCIG00000016456	GTPBP6	90	47.974	Phascolarctos_cinereus
ENSEBUG00000000404	gtpbp6	76	50.594	ENSPFOG00000015695	gtpbp6	99	51.889	Poecilia_formosa
ENSEBUG00000000404	gtpbp6	76	51.069	ENSPLAG00000015495	gtpbp6	94	47.071	Poecilia_latipinna
ENSEBUG00000000404	gtpbp6	76	50.831	ENSPMEG00000000859	gtpbp6	93	47.251	Poecilia_mexicana
ENSEBUG00000000404	gtpbp6	76	51.306	ENSPREG00000017643	gtpbp6	94	47.485	Poecilia_reticulata
ENSEBUG00000000404	gtpbp6	82	49.237	ENSPNYG00000000521	gtpbp6	78	50.948	Pundamilia_nyererei
ENSEBUG00000000404	gtpbp6	84	47.134	ENSPNAG00000002094	gtpbp6	76	50.356	Pygocentrus_nattereri
ENSEBUG00000000404	gtpbp6	77	48.951	ENSRNOG00000037426	Gtpbp6	83	48.951	Rattus_norvegicus
ENSEBUG00000000404	gtpbp6	77	48.951	ENSRNOG00000048168	Gtpbp6	83	48.951	Rattus_norvegicus
ENSEBUG00000000404	gtpbp6	78	48.268	ENSRBIG00000027538	GTPBP6	92	45.214	Rhinopithecus_bieti
ENSEBUG00000000404	gtpbp6	78	48.268	ENSRROG00000033503	GTPBP6	92	45.214	Rhinopithecus_roxellana
ENSEBUG00000000404	gtpbp6	77	48.244	ENSSHAG00000015570	GTPBP6	93	47.083	Sarcophilus_harrisii
ENSEBUG00000000404	gtpbp6	83	49.567	ENSSFOG00015004098	gtpbp6	75	52.019	Scleropages_formosus
ENSEBUG00000000404	gtpbp6	79	50.000	ENSSMAG00000019520	gtpbp6	85	49.011	Scophthalmus_maximus
ENSEBUG00000000404	gtpbp6	84	47.246	ENSSDUG00000002202	gtpbp6	87	46.908	Seriola_dumerili
ENSEBUG00000000404	gtpbp6	84	46.908	ENSSLDG00000023633	gtpbp6	97	46.269	Seriola_lalandi_dorsalis
ENSEBUG00000000404	gtpbp6	77	51.415	ENSSPUG00000005537	GTPBP6	83	51.415	Sphenodon_punctatus
ENSEBUG00000000404	gtpbp6	76	50.000	ENSSPAG00000017406	gtpbp6	84	48.344	Stegastes_partitus
ENSEBUG00000000404	gtpbp6	52	48.958	ENSSPAG00000017331	gtpbp6	96	48.958	Stegastes_partitus
ENSEBUG00000000404	gtpbp6	78	47.575	ENSSSCG00000033858	-	91	46.042	Sus_scrofa
ENSEBUG00000000404	gtpbp6	78	47.575	ENSSSCG00000037491	-	91	46.042	Sus_scrofa
ENSEBUG00000000404	gtpbp6	77	51.628	ENSTGUG00000010642	-	95	51.628	Taeniopygia_guttata
ENSEBUG00000000404	gtpbp6	82	47.253	ENSTRUG00000011175	gtpbp6	90	46.868	Takifugu_rubripes
ENSEBUG00000000404	gtpbp6	79	50.682	ENSTNIG00000010659	gtpbp6	98	51.415	Tetraodon_nigroviridis
ENSEBUG00000000404	gtpbp6	72	49.875	ENSUMAG00000018848	GTPBP6	98	49.875	Ursus_maritimus
ENSEBUG00000000404	gtpbp6	75	49.367	ENSVVUG00000008199	GTPBP6	82	40.192	Vulpes_vulpes
ENSEBUG00000000404	gtpbp6	77	51.981	ENSXETG00000004125	gtpbp6	88	49.476	Xenopus_tropicalis
ENSEBUG00000000404	gtpbp6	53	53.957	ENSXCOG00000006281	gtpbp6	67	49.112	Xiphophorus_couchianus
ENSEBUG00000000404	gtpbp6	76	50.831	ENSXMAG00000015980	gtpbp6	91	47.817	Xiphophorus_maculatus