EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000000439 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 16925 bases
Position: chrFYBX02010124.1:1814271-1831195
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000000221	S1	PF00575.23	3.1e-20	1	1
ENSEBUP00000000242	S1	PF00575.23	4.5e-20	1	1
ENSEBUP00000000242	SHS2_Rpb7-N	PF03876.17	2.6e-15	1	1
ENSEBUP00000000221	SHS2_Rpb7-N	PF03876.17	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000000511	-	2149	-	ENSEBUP00000000221	250 (aa)	-	-
ENSEBUT00000000532	-	1769	-	ENSEBUP00000000242	201 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000000439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000000439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000000439	-	86	97.093	ENSG00000168002	POLR2G	100	100.000	Homo_sapiens
ENSEBUG00000000439	-	84	95.858	ENSAPOG00000010949	polr2gl	99	95.858	Acanthochromis_polyacanthus
ENSEBUG00000000439	-	86	97.093	ENSAMEG00000006386	POLR2G	100	97.093	Ailuropoda_melanoleuca
ENSEBUG00000000439	-	84	95.858	ENSACIG00000007252	polr2gl	88	95.858	Amphilophus_citrinellus
ENSEBUG00000000439	-	86	97.674	ENSAOCG00000013628	polr2gl	100	97.674	Amphiprion_ocellaris
ENSEBUG00000000439	-	86	97.674	ENSAPEG00000011229	polr2gl	100	97.674	Amphiprion_percula
ENSEBUG00000000439	-	86	97.674	ENSATEG00000013382	polr2gl	100	97.674	Anabas_testudineus
ENSEBUG00000000439	-	83	96.407	ENSACAG00000001005	POLR2G	99	95.882	Anolis_carolinensis
ENSEBUG00000000439	-	86	97.093	ENSANAG00000037428	POLR2G	100	97.093	Aotus_nancymaae
ENSEBUG00000000439	-	86	95.930	ENSACLG00000014753	polr2gl	100	95.930	Astatotilapia_calliptera
ENSEBUG00000000439	-	86	97.674	ENSAMXG00000030439	polr2gl	100	97.674	Astyanax_mexicanus
ENSEBUG00000000439	-	86	97.093	ENSBTAG00000009483	POLR2G	100	97.093	Bos_taurus
ENSEBUG00000000439	-	86	76.163	WBGene00021845	rpb-7	87	76.163	Caenorhabditis_elegans
ENSEBUG00000000439	-	86	97.093	ENSCJAG00000018688	POLR2G	100	97.093	Callithrix_jacchus
ENSEBUG00000000439	-	86	97.093	ENSCAFG00020013136	POLR2G	100	97.093	Canis_lupus_dingo
ENSEBUG00000000439	-	84	97.041	ENSCHIG00000023730	POLR2G	89	97.041	Capra_hircus
ENSEBUG00000000439	-	86	96.512	ENSTSYG00000011918	POLR2G	100	96.512	Carlito_syrichta
ENSEBUG00000000439	-	65	96.183	ENSCAPG00000017572	POLR2G	100	96.183	Cavia_aperea
ENSEBUG00000000439	-	86	97.093	ENSCPOG00000036420	POLR2G	100	97.093	Cavia_porcellus
ENSEBUG00000000439	-	90	85.635	ENSCCAG00000033483	-	99	85.635	Cebus_capucinus
ENSEBUG00000000439	-	86	97.093	ENSCATG00000034443	POLR2G	100	97.093	Cercocebus_atys
ENSEBUG00000000439	-	86	97.093	ENSCLAG00000000802	POLR2G	100	97.093	Chinchilla_lanigera
ENSEBUG00000000439	-	86	97.093	ENSCSAG00000006715	POLR2G	100	97.093	Chlorocebus_sabaeus
ENSEBUG00000000439	-	66	96.992	ENSCHOG00000009928	POLR2G	100	96.992	Choloepus_hoffmanni
ENSEBUG00000000439	-	86	97.674	ENSCPBG00000017972	POLR2G	100	97.674	Chrysemys_picta_bellii
ENSEBUG00000000439	-	86	90.116	ENSCING00000004991	-	100	90.116	Ciona_intestinalis
ENSEBUG00000000439	-	86	86.628	ENSCSAVG00000002667	-	100	86.628	Ciona_savignyi
ENSEBUG00000000439	-	86	97.093	ENSCANG00000043203	POLR2G	100	97.093	Colobus_angolensis_palliatus
ENSEBUG00000000439	-	86	90.698	ENSCGRG00001011370	-	100	90.698	Cricetulus_griseus_chok1gshd
ENSEBUG00000000439	-	86	97.093	ENSCGRG00001022692	-	100	97.093	Cricetulus_griseus_chok1gshd
ENSEBUG00000000439	-	86	97.093	ENSCGRG00000015350	Polr2g	100	97.093	Cricetulus_griseus_crigri
ENSEBUG00000000439	-	84	97.619	ENSCSEG00000011991	polr2gl	90	97.619	Cynoglossus_semilaevis
ENSEBUG00000000439	-	86	97.674	ENSCVAG00000021090	polr2gl	100	97.674	Cyprinodon_variegatus
ENSEBUG00000000439	-	86	97.093	ENSDARG00000056127	polr2gl	100	97.093	Danio_rerio
ENSEBUG00000000439	-	86	97.093	ENSDNOG00000043426	POLR2G	100	97.093	Dasypus_novemcinctus
ENSEBUG00000000439	-	86	61.047	ENSDORG00000015696	-	100	61.047	Dipodomys_ordii
ENSEBUG00000000439	-	86	93.605	ENSDORG00000010351	-	100	93.605	Dipodomys_ordii
ENSEBUG00000000439	-	86	79.070	FBgn0051155	Rpb7	99	79.070	Drosophila_melanogaster
ENSEBUG00000000439	-	86	81.395	ENSETEG00000019637	POLR2G	100	81.395	Echinops_telfairi
ENSEBUG00000000439	-	86	97.093	ENSEASG00005011357	POLR2G	100	97.093	Equus_asinus_asinus
ENSEBUG00000000439	-	84	97.041	ENSECAG00000021465	POLR2G	87	97.041	Equus_caballus
ENSEBUG00000000439	-	86	66.860	ENSEEUG00000007416	POLR2G	100	66.860	Erinaceus_europaeus
ENSEBUG00000000439	-	86	97.093	ENSELUG00000003401	polr2g	100	97.093	Esox_lucius
ENSEBUG00000000439	-	91	88.601	ENSFCAG00000026072	POLR2G	70	88.601	Felis_catus
ENSEBUG00000000439	-	86	97.093	ENSFDAG00000020977	POLR2G	100	97.093	Fukomys_damarensis
ENSEBUG00000000439	-	86	97.093	ENSFHEG00000003053	polr2gl	100	97.093	Fundulus_heteroclitus
ENSEBUG00000000439	-	82	97.561	ENSGMOG00000000535	polr2gl	100	97.561	Gadus_morhua
ENSEBUG00000000439	-	84	95.833	ENSGAFG00000001773	polr2gl	100	95.833	Gambusia_affinis
ENSEBUG00000000439	-	86	97.674	ENSGACG00000017706	polr2gl	100	97.674	Gasterosteus_aculeatus
ENSEBUG00000000439	-	84	97.619	ENSGAGG00000001303	POLR2G	100	97.619	Gopherus_agassizii
ENSEBUG00000000439	-	86	97.093	ENSGGOG00000011739	POLR2G	100	97.093	Gorilla_gorilla
ENSEBUG00000000439	-	84	94.083	ENSHBUG00000011421	polr2gl	93	94.083	Haplochromis_burtoni
ENSEBUG00000000439	-	86	97.093	ENSHGLG00000004851	POLR2G	100	97.093	Heterocephalus_glaber_female
ENSEBUG00000000439	-	86	91.860	ENSHGLG00100018441	POLR2G	100	91.860	Heterocephalus_glaber_male
ENSEBUG00000000439	-	87	96.552	ENSHCOG00000009499	polr2gl	92	96.552	Hippocampus_comes
ENSEBUG00000000439	-	86	97.093	ENSIPUG00000000671	polr2g	100	97.093	Ictalurus_punctatus
ENSEBUG00000000439	-	86	95.930	ENSSTOG00000004391	POLR2G	100	95.930	Ictidomys_tridecemlineatus
ENSEBUG00000000439	-	86	97.093	ENSJJAG00000005019	Polr2g	100	97.093	Jaculus_jaculus
ENSEBUG00000000439	-	84	97.633	ENSKMAG00000011056	polr2gl	90	97.076	Kryptolebias_marmoratus
ENSEBUG00000000439	-	86	97.674	ENSLBEG00000001458	polr2gl	100	97.674	Labrus_bergylta
ENSEBUG00000000439	-	86	98.256	ENSLACG00000006420	POLR2G	100	98.256	Latimeria_chalumnae
ENSEBUG00000000439	-	86	97.674	ENSLAFG00000004354	POLR2G	100	97.674	Loxodonta_africana
ENSEBUG00000000439	-	86	97.093	ENSMFAG00000033674	POLR2G	100	97.093	Macaca_fascicularis
ENSEBUG00000000439	-	86	97.093	ENSMMUG00000014368	POLR2G	100	97.093	Macaca_mulatta
ENSEBUG00000000439	-	86	97.093	ENSMNEG00000041523	POLR2G	100	97.093	Macaca_nemestrina
ENSEBUG00000000439	-	86	97.093	ENSMLEG00000032928	POLR2G	100	97.093	Mandrillus_leucophaeus
ENSEBUG00000000439	-	82	96.951	ENSMAMG00000001188	polr2gl	100	96.951	Mastacembelus_armatus
ENSEBUG00000000439	-	86	95.930	ENSMZEG00005003618	polr2gl	100	95.930	Maylandia_zebra
ENSEBUG00000000439	-	86	97.674	ENSMICG00000009967	POLR2G	100	97.674	Microcebus_murinus
ENSEBUG00000000439	-	85	93.529	ENSMOCG00000010638	Polr2g	98	93.529	Microtus_ochrogaster
ENSEBUG00000000439	-	84	97.633	ENSMMOG00000003102	polr2gl	95	95.954	Mola_mola
ENSEBUG00000000439	-	86	95.930	ENSMODG00000007984	POLR2G	98	97.633	Monodelphis_domestica
ENSEBUG00000000439	-	86	97.674	ENSMALG00000013385	polr2gl	100	97.674	Monopterus_albus
ENSEBUG00000000439	-	86	97.093	MGP_CAROLIEiJ_G0022653	Polr2g	100	97.093	Mus_caroli
ENSEBUG00000000439	-	86	97.093	ENSMUSG00000071662	Polr2g	100	97.093	Mus_musculus
ENSEBUG00000000439	-	86	97.093	MGP_PahariEiJ_G0014148	Polr2g	100	97.093	Mus_pahari
ENSEBUG00000000439	-	86	97.093	MGP_SPRETEiJ_G0023566	Polr2g	100	97.093	Mus_spretus
ENSEBUG00000000439	-	86	97.093	ENSMPUG00000013667	POLR2G	100	97.093	Mustela_putorius_furo
ENSEBUG00000000439	-	86	97.674	ENSMLUG00000011039	-	100	97.674	Myotis_lucifugus
ENSEBUG00000000439	-	86	96.512	ENSMLUG00000003971	-	100	96.512	Myotis_lucifugus
ENSEBUG00000000439	-	86	97.093	ENSNGAG00000020624	Polr2g	100	97.093	Nannospalax_galili
ENSEBUG00000000439	-	81	95.062	ENSNBRG00000003949	polr2gl	100	95.062	Neolamprologus_brichardi
ENSEBUG00000000439	-	84	77.515	ENSNLEG00000004097	-	91	77.515	Nomascus_leucogenys
ENSEBUG00000000439	-	84	97.619	ENSMEUG00000011547	POLR2G	100	97.619	Notamacropus_eugenii
ENSEBUG00000000439	-	86	79.651	ENSOPRG00000014769	POLR2G	100	79.651	Ochotona_princeps
ENSEBUG00000000439	-	86	70.930	ENSODEG00000005609	-	100	70.930	Octodon_degus
ENSEBUG00000000439	-	78	87.821	ENSODEG00000018495	-	100	87.821	Octodon_degus
ENSEBUG00000000439	-	86	97.093	ENSODEG00000002048	-	100	97.093	Octodon_degus
ENSEBUG00000000439	-	86	97.674	ENSONIG00000005183	polr2gl	100	97.674	Oreochromis_niloticus
ENSEBUG00000000439	-	86	97.674	ENSOANG00000005808	POLR2G	100	97.674	Ornithorhynchus_anatinus
ENSEBUG00000000439	-	86	97.093	ENSOCUG00000009485	POLR2G	100	97.093	Oryctolagus_cuniculus
ENSEBUG00000000439	-	86	97.674	ENSORLG00000003154	polr2gl	100	97.674	Oryzias_latipes
ENSEBUG00000000439	-	84	95.858	ENSORLG00020017682	polr2gl	99	95.858	Oryzias_latipes_hni
ENSEBUG00000000439	-	86	97.674	ENSORLG00015018537	polr2gl	100	97.674	Oryzias_latipes_hsok
ENSEBUG00000000439	-	86	97.674	ENSOMEG00000020086	polr2gl	100	97.674	Oryzias_melastigma
ENSEBUG00000000439	-	86	78.977	ENSOGAG00000032720	POLR2G	100	78.977	Otolemur_garnettii
ENSEBUG00000000439	-	84	95.882	ENSOARG00000016984	POLR2G	81	95.882	Ovis_aries
ENSEBUG00000000439	-	86	97.093	ENSPPAG00000039868	POLR2G	100	97.093	Pan_paniscus
ENSEBUG00000000439	-	86	97.093	ENSPPRG00000005669	POLR2G	100	97.093	Panthera_pardus
ENSEBUG00000000439	-	86	92.571	ENSPTIG00000015781	POLR2G	100	92.571	Panthera_tigris_altaica
ENSEBUG00000000439	-	86	97.093	ENSPANG00000025888	POLR2G	100	97.093	Papio_anubis
ENSEBUG00000000439	-	85	97.076	ENSPKIG00000000902	polr2gl	90	97.041	Paramormyrops_kingsleyae
ENSEBUG00000000439	-	88	95.480	ENSPSIG00000004285	POLR2G	84	95.480	Pelodiscus_sinensis
ENSEBUG00000000439	-	86	97.674	ENSPMGG00000008462	polr2gl	100	97.674	Periophthalmus_magnuspinnatus
ENSEBUG00000000439	-	86	97.093	ENSPEMG00000000685	Polr2g	100	97.093	Peromyscus_maniculatus_bairdii
ENSEBUG00000000439	-	86	97.674	ENSPCIG00000015245	-	100	97.674	Phascolarctos_cinereus
ENSEBUG00000000439	-	84	97.041	ENSPLAG00000022848	polr2gl	95	97.041	Poecilia_latipinna
ENSEBUG00000000439	-	86	97.093	ENSPMEG00000009317	polr2gl	100	97.093	Poecilia_mexicana
ENSEBUG00000000439	-	86	97.093	ENSPREG00000016633	polr2gl	100	97.093	Poecilia_reticulata
ENSEBUG00000000439	-	86	87.429	ENSPPYG00000003147	POLR2G	100	87.429	Pongo_abelii
ENSEBUG00000000439	-	86	97.674	ENSPCAG00000016408	POLR2G	100	97.674	Procavia_capensis
ENSEBUG00000000439	-	86	97.674	ENSPCOG00000024131	POLR2G	100	97.674	Propithecus_coquereli
ENSEBUG00000000439	-	86	96.512	ENSPVAG00000003481	POLR2G	100	96.512	Pteropus_vampyrus
ENSEBUG00000000439	-	86	95.930	ENSPNYG00000016136	polr2gl	100	95.930	Pundamilia_nyererei
ENSEBUG00000000439	-	86	97.674	ENSPNAG00000025210	polr2gl	100	97.674	Pygocentrus_nattereri
ENSEBUG00000000439	-	86	97.093	ENSRNOG00000019439	Polr2g	100	97.093	Rattus_norvegicus
ENSEBUG00000000439	-	86	97.093	ENSRBIG00000009173	POLR2G	100	97.093	Rhinopithecus_bieti
ENSEBUG00000000439	-	84	96.450	ENSRROG00000033543	POLR2G	90	76.836	Rhinopithecus_roxellana
ENSEBUG00000000439	-	85	42.614	YDR404C	RPB7	100	42.614	Saccharomyces_cerevisiae
ENSEBUG00000000439	-	86	97.093	ENSSBOG00000015220	POLR2G	100	97.093	Saimiri_boliviensis_boliviensis
ENSEBUG00000000439	-	86	97.674	ENSSHAG00000006006	POLR2G	100	97.674	Sarcophilus_harrisii
ENSEBUG00000000439	-	86	97.674	ENSSFOG00015001245	polr2g	100	97.674	Scleropages_formosus
ENSEBUG00000000439	-	86	97.674	ENSSMAG00000001197	polr2gl	100	97.674	Scophthalmus_maximus
ENSEBUG00000000439	-	86	97.674	ENSSDUG00000015179	polr2gl	100	97.674	Seriola_dumerili
ENSEBUG00000000439	-	86	97.674	ENSSLDG00000001822	polr2gl	100	97.674	Seriola_lalandi_dorsalis
ENSEBUG00000000439	-	86	97.674	ENSSPUG00000008614	POLR2G	100	97.674	Sphenodon_punctatus
ENSEBUG00000000439	-	84	97.633	ENSSPAG00000015276	polr2gl	99	97.633	Stegastes_partitus
ENSEBUG00000000439	-	86	97.093	ENSSSCG00000025571	POLR2G	100	97.093	Sus_scrofa
ENSEBUG00000000439	-	66	96.241	ENSTGUG00000014456	POLR2G	100	96.241	Taeniopygia_guttata
ENSEBUG00000000439	-	86	97.674	ENSTRUG00000002492	polr2gl	100	97.674	Takifugu_rubripes
ENSEBUG00000000439	-	86	79.070	ENSTBEG00000015752	POLR2G	100	79.070	Tupaia_belangeri
ENSEBUG00000000439	-	86	97.093	ENSTTRG00000002478	POLR2G	100	97.093	Tursiops_truncatus
ENSEBUG00000000439	-	86	97.093	ENSUAMG00000025968	POLR2G	100	97.093	Ursus_americanus
ENSEBUG00000000439	-	55	97.297	ENSUMAG00000014537	POLR2G	66	97.297	Ursus_maritimus
ENSEBUG00000000439	-	65	92.308	ENSVPAG00000009534	POLR2G	100	92.308	Vicugna_pacos
ENSEBUG00000000439	-	86	97.093	ENSVVUG00000029844	POLR2G	100	97.093	Vulpes_vulpes
ENSEBUG00000000439	-	86	97.093	ENSXETG00000006022	polr2g	100	97.093	Xenopus_tropicalis
ENSEBUG00000000439	-	84	97.041	ENSXCOG00000002005	polr2gl	93	97.041	Xiphophorus_couchianus
ENSEBUG00000000439	-	84	97.041	ENSXMAG00000010063	polr2gl	93	97.041	Xiphophorus_maculatus