EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000000622 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 9636 bases
Position: chrFYBX02006399.1:1606163-1615798
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000000537	Exo_endo_phos	PF03372.23	1.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000000837	-	780	-	ENSEBUP00000000537	259 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000000622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000000622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000000622	-	92	64.854	ENSG00000100823	APEX1	75	64.854	Homo_sapiens
ENSEBUG00000000622	-	92	60.504	ENSAPOG00000017002	apex1	78	60.504	Acanthochromis_polyacanthus
ENSEBUG00000000622	-	92	64.435	ENSAMEG00000005418	APEX1	75	64.435	Ailuropoda_melanoleuca
ENSEBUG00000000622	-	92	60.504	ENSACIG00000010653	apex1	80	60.504	Amphilophus_citrinellus
ENSEBUG00000000622	-	92	60.084	ENSAOCG00000009649	apex1	77	60.084	Amphiprion_ocellaris
ENSEBUG00000000622	-	92	60.084	ENSAPEG00000021453	apex1	77	60.084	Amphiprion_percula
ENSEBUG00000000622	-	91	62.025	ENSATEG00000002883	apex1	74	62.025	Anabas_testudineus
ENSEBUG00000000622	-	92	61.345	ENSACAG00000008099	APEX1	75	61.345	Anolis_carolinensis
ENSEBUG00000000622	-	92	64.854	ENSANAG00000030117	APEX1	75	64.854	Aotus_nancymaae
ENSEBUG00000000622	-	92	60.504	ENSACLG00000018441	apex1	76	60.504	Astatotilapia_calliptera
ENSEBUG00000000622	-	92	58.824	ENSAMXG00000034699	apex1	76	58.824	Astyanax_mexicanus
ENSEBUG00000000622	-	92	63.598	ENSBTAG00000002745	APEX1	75	63.598	Bos_taurus
ENSEBUG00000000622	-	95	43.496	WBGene00001372	exo-3	80	44.635	Caenorhabditis_elegans
ENSEBUG00000000622	-	92	65.272	ENSCJAG00000009726	APEX1	75	65.272	Callithrix_jacchus
ENSEBUG00000000622	-	92	64.854	ENSCAFG00000032033	APEX1	75	64.854	Canis_familiaris
ENSEBUG00000000622	-	92	64.854	ENSCAFG00020014377	-	75	64.854	Canis_lupus_dingo
ENSEBUG00000000622	-	92	49.791	ENSCHIG00000014537	-	75	49.791	Capra_hircus
ENSEBUG00000000622	-	92	63.598	ENSCHIG00000007298	-	75	63.598	Capra_hircus
ENSEBUG00000000622	-	92	62.762	ENSTSYG00000034813	APEX1	75	62.762	Carlito_syrichta
ENSEBUG00000000622	-	92	63.900	ENSCAPG00000016235	APEX1	91	64.557	Cavia_aperea
ENSEBUG00000000622	-	92	64.435	ENSCPOG00000030909	APEX1	75	64.435	Cavia_porcellus
ENSEBUG00000000622	-	92	65.272	ENSCCAG00000033056	-	75	65.272	Cebus_capucinus
ENSEBUG00000000622	-	96	53.785	ENSCCAG00000031931	-	72	58.108	Cebus_capucinus
ENSEBUG00000000622	-	92	64.435	ENSCATG00000015580	APEX1	75	64.435	Cercocebus_atys
ENSEBUG00000000622	-	92	64.435	ENSCLAG00000001002	APEX1	75	64.435	Chinchilla_lanigera
ENSEBUG00000000622	-	92	64.017	ENSCSAG00000016670	-	75	64.017	Chlorocebus_sabaeus
ENSEBUG00000000622	-	92	64.017	ENSCSAG00000016685	-	75	64.017	Chlorocebus_sabaeus
ENSEBUG00000000622	-	92	60.924	ENSCPBG00000009567	APEX1	75	60.924	Chrysemys_picta_bellii
ENSEBUG00000000622	-	92	52.941	ENSCING00000008137	-	75	52.941	Ciona_intestinalis
ENSEBUG00000000622	-	92	44.958	ENSCSAVG00000007144	-	92	44.118	Ciona_savignyi
ENSEBUG00000000622	-	92	64.854	ENSCANG00000030726	APEX1	75	64.854	Colobus_angolensis_palliatus
ENSEBUG00000000622	-	92	65.272	ENSCGRG00001017046	Apex1	75	65.272	Cricetulus_griseus_chok1gshd
ENSEBUG00000000622	-	92	65.272	ENSCGRG00000008984	Apex1	75	65.272	Cricetulus_griseus_crigri
ENSEBUG00000000622	-	92	59.664	ENSCSEG00000017499	apex1	76	59.664	Cynoglossus_semilaevis
ENSEBUG00000000622	-	92	60.924	ENSCVAG00000022075	apex1	76	60.924	Cyprinodon_variegatus
ENSEBUG00000000622	-	92	60.924	ENSDARG00000045843	apex1	76	60.924	Danio_rerio
ENSEBUG00000000622	-	92	60.251	ENSDNOG00000042234	APEX1	70	60.251	Dasypus_novemcinctus
ENSEBUG00000000622	-	92	64.017	ENSDORG00000001616	Apex1	75	64.017	Dipodomys_ordii
ENSEBUG00000000622	-	92	64.854	ENSETEG00000004855	-	75	64.854	Echinops_telfairi
ENSEBUG00000000622	-	92	64.435	ENSEASG00005017489	APEX1	55	64.435	Equus_asinus_asinus
ENSEBUG00000000622	-	92	64.435	ENSECAG00000022325	APEX1	61	64.435	Equus_caballus
ENSEBUG00000000622	-	88	64.192	ENSEEUG00000012569	APEX1	79	64.192	Erinaceus_europaeus
ENSEBUG00000000622	-	92	60.084	ENSELUG00000021706	apex1	76	60.084	Esox_lucius
ENSEBUG00000000622	-	92	64.854	ENSFCAG00000030869	APEX1	75	64.854	Felis_catus
ENSEBUG00000000622	-	92	64.017	ENSFDAG00000006120	APEX1	75	64.017	Fukomys_damarensis
ENSEBUG00000000622	-	92	62.185	ENSFHEG00000009031	apex1	64	62.185	Fundulus_heteroclitus
ENSEBUG00000000622	-	92	57.384	ENSGMOG00000007943	apex1	76	57.384	Gadus_morhua
ENSEBUG00000000622	-	92	60.504	ENSGAFG00000005311	apex1	76	60.504	Gambusia_affinis
ENSEBUG00000000622	-	92	59.664	ENSGACG00000019497	apex1	89	59.664	Gasterosteus_aculeatus
ENSEBUG00000000622	-	92	60.924	ENSGAGG00000014999	APEX1	75	60.924	Gopherus_agassizii
ENSEBUG00000000622	-	92	64.435	ENSGGOG00000002128	APEX1	75	64.435	Gorilla_gorilla
ENSEBUG00000000622	-	92	60.084	ENSHBUG00000005894	apex1	77	60.084	Haplochromis_burtoni
ENSEBUG00000000622	-	92	65.272	ENSHGLG00000002848	APEX1	75	65.272	Heterocephalus_glaber_female
ENSEBUG00000000622	-	92	65.272	ENSHGLG00100017878	APEX1	75	65.272	Heterocephalus_glaber_male
ENSEBUG00000000622	-	92	60.504	ENSHCOG00000009961	apex1	76	60.504	Hippocampus_comes
ENSEBUG00000000622	-	92	60.504	ENSIPUG00000005799	apex1	76	60.504	Ictalurus_punctatus
ENSEBUG00000000622	-	92	62.762	ENSSTOG00000010096	APEX1	75	62.762	Ictidomys_tridecemlineatus
ENSEBUG00000000622	-	92	57.741	ENSJJAG00000003660	-	75	57.741	Jaculus_jaculus
ENSEBUG00000000622	-	92	57.322	ENSJJAG00000020465	-	75	57.322	Jaculus_jaculus
ENSEBUG00000000622	-	92	64.854	ENSJJAG00000012067	-	75	64.854	Jaculus_jaculus
ENSEBUG00000000622	-	92	59.664	ENSKMAG00000021171	apex1	76	59.664	Kryptolebias_marmoratus
ENSEBUG00000000622	-	92	59.244	ENSLBEG00000010248	apex1	76	59.244	Labrus_bergylta
ENSEBUG00000000622	-	92	60.084	ENSLACG00000008617	APEX1	75	60.084	Latimeria_chalumnae
ENSEBUG00000000622	-	92	61.345	ENSLOCG00000015516	apex1	75	61.345	Lepisosteus_oculatus
ENSEBUG00000000622	-	92	64.854	ENSLAFG00000021872	APEX1	75	64.854	Loxodonta_africana
ENSEBUG00000000622	-	92	64.435	ENSMFAG00000002565	APEX1	75	64.435	Macaca_fascicularis
ENSEBUG00000000622	-	92	64.435	ENSMMUG00000048039	APEX1	75	64.435	Macaca_mulatta
ENSEBUG00000000622	-	92	64.435	ENSMNEG00000036944	APEX1	75	64.435	Macaca_nemestrina
ENSEBUG00000000622	-	92	64.435	ENSMLEG00000042125	APEX1	75	64.435	Mandrillus_leucophaeus
ENSEBUG00000000622	-	92	60.084	ENSMAMG00000023526	apex1	76	60.084	Mastacembelus_armatus
ENSEBUG00000000622	-	92	60.504	ENSMZEG00005014187	apex1	76	60.504	Maylandia_zebra
ENSEBUG00000000622	-	92	65.690	ENSMAUG00000013994	Apex1	75	65.690	Mesocricetus_auratus
ENSEBUG00000000622	-	92	63.598	ENSMICG00000043554	APEX1	75	63.598	Microcebus_murinus
ENSEBUG00000000622	-	92	65.272	ENSMOCG00000013721	Apex1	75	65.272	Microtus_ochrogaster
ENSEBUG00000000622	-	91	58.650	ENSMMOG00000010031	apex1	74	58.650	Mola_mola
ENSEBUG00000000622	-	92	64.435	ENSMODG00000007125	APEX1	74	64.435	Monodelphis_domestica
ENSEBUG00000000622	-	92	54.202	ENSMALG00000011699	apex1	63	54.202	Monopterus_albus
ENSEBUG00000000622	-	91	63.866	MGP_CAROLIEiJ_G0019209	Apex1	75	63.866	Mus_caroli
ENSEBUG00000000622	-	92	64.017	ENSMUSG00000035960	Apex1	75	64.017	Mus_musculus
ENSEBUG00000000622	-	92	64.017	MGP_PahariEiJ_G0030232	Apex1	75	64.017	Mus_pahari
ENSEBUG00000000622	-	92	64.017	MGP_SPRETEiJ_G0020101	Apex1	75	64.017	Mus_spretus
ENSEBUG00000000622	-	92	63.180	ENSMLUG00000028957	APEX1	74	63.180	Myotis_lucifugus
ENSEBUG00000000622	-	92	64.017	ENSNGAG00000002725	-	75	64.017	Nannospalax_galili
ENSEBUG00000000622	-	76	50.754	ENSNGAG00000021748	-	71	45.763	Nannospalax_galili
ENSEBUG00000000622	-	92	60.084	ENSNBRG00000005334	apex1	70	60.084	Neolamprologus_brichardi
ENSEBUG00000000622	-	92	64.435	ENSNLEG00000010839	APEX1	76	64.435	Nomascus_leucogenys
ENSEBUG00000000622	-	92	63.180	ENSMEUG00000014519	APEX1	76	63.180	Notamacropus_eugenii
ENSEBUG00000000622	-	92	63.180	ENSOPRG00000014029	APEX1	75	63.180	Ochotona_princeps
ENSEBUG00000000622	-	92	64.854	ENSODEG00000001703	-	75	64.854	Octodon_degus
ENSEBUG00000000622	-	91	54.237	ENSODEG00000006583	-	73	54.237	Octodon_degus
ENSEBUG00000000622	-	87	54.148	ENSODEG00000004777	-	76	54.148	Octodon_degus
ENSEBUG00000000622	-	92	60.504	ENSONIG00000012089	apex1	76	60.504	Oreochromis_niloticus
ENSEBUG00000000622	-	92	61.506	ENSOANG00000008836	APEX1	59	61.506	Ornithorhynchus_anatinus
ENSEBUG00000000622	-	92	64.854	ENSOCUG00000005022	APEX1	75	64.854	Oryctolagus_cuniculus
ENSEBUG00000000622	-	92	60.084	ENSORLG00000012378	apex1	76	60.084	Oryzias_latipes
ENSEBUG00000000622	-	92	60.084	ENSORLG00020021371	apex1	76	60.084	Oryzias_latipes_hni
ENSEBUG00000000622	-	92	60.084	ENSORLG00015020089	apex1	76	60.084	Oryzias_latipes_hsok
ENSEBUG00000000622	-	92	60.084	ENSOMEG00000018876	apex1	76	60.084	Oryzias_melastigma
ENSEBUG00000000622	-	91	56.846	ENSOGAG00000029355	-	76	56.846	Otolemur_garnettii
ENSEBUG00000000622	-	92	64.854	ENSOGAG00000013335	-	75	64.854	Otolemur_garnettii
ENSEBUG00000000622	-	88	60.262	ENSOARG00000001876	-	74	60.262	Ovis_aries
ENSEBUG00000000622	-	92	52.301	ENSOARG00000014424	-	76	52.301	Ovis_aries
ENSEBUG00000000622	-	92	63.180	ENSOARG00000019740	-	75	63.180	Ovis_aries
ENSEBUG00000000622	-	92	64.854	ENSPPAG00000038760	APEX1	76	64.854	Pan_paniscus
ENSEBUG00000000622	-	92	64.854	ENSPPRG00000011794	APEX1	75	64.854	Panthera_pardus
ENSEBUG00000000622	-	92	64.854	ENSPTIG00000014829	APEX1	75	64.854	Panthera_tigris_altaica
ENSEBUG00000000622	-	92	64.854	ENSPTRG00000006093	APEX1	76	64.854	Pan_troglodytes
ENSEBUG00000000622	-	92	64.435	ENSPANG00000022757	APEX1	75	64.435	Papio_anubis
ENSEBUG00000000622	-	92	61.765	ENSPKIG00000003504	apex1	75	61.765	Paramormyrops_kingsleyae
ENSEBUG00000000622	-	91	60.593	ENSPMGG00000016596	apex1	71	60.593	Periophthalmus_magnuspinnatus
ENSEBUG00000000622	-	92	65.272	ENSPEMG00000019097	Apex1	75	65.272	Peromyscus_maniculatus_bairdii
ENSEBUG00000000622	-	92	66.807	ENSPMAG00000007275	-	81	66.807	Petromyzon_marinus
ENSEBUG00000000622	-	98	58.712	ENSPCIG00000023274	APEX1	75	63.180	Phascolarctos_cinereus
ENSEBUG00000000622	-	92	60.084	ENSPFOG00000004178	apex1	76	60.084	Poecilia_formosa
ENSEBUG00000000622	-	92	60.504	ENSPLAG00000012779	apex1	76	60.504	Poecilia_latipinna
ENSEBUG00000000622	-	92	60.084	ENSPMEG00000019623	apex1	76	60.084	Poecilia_mexicana
ENSEBUG00000000622	-	92	60.084	ENSPREG00000014298	apex1	76	60.084	Poecilia_reticulata
ENSEBUG00000000622	-	92	64.435	ENSPPYG00000005565	APEX1	75	64.435	Pongo_abelii
ENSEBUG00000000622	-	92	61.506	ENSPCAG00000010376	APEX1	75	61.506	Procavia_capensis
ENSEBUG00000000622	-	92	64.017	ENSPCOG00000021564	APEX1	75	64.017	Propithecus_coquereli
ENSEBUG00000000622	-	92	64.017	ENSPVAG00000010736	APEX1	74	64.017	Pteropus_vampyrus
ENSEBUG00000000622	-	92	60.504	ENSPNYG00000023940	apex1	76	60.504	Pundamilia_nyererei
ENSEBUG00000000622	-	83	57.674	ENSPNAG00000020897	apex1	71	58.019	Pygocentrus_nattereri
ENSEBUG00000000622	-	92	64.017	ENSRNOG00000009663	Apex1	75	64.017	Rattus_norvegicus
ENSEBUG00000000622	-	92	64.854	ENSRBIG00000038325	APEX1	74	64.854	Rhinopithecus_bieti
ENSEBUG00000000622	-	92	56.485	ENSSBOG00000031372	-	77	56.485	Saimiri_boliviensis_boliviensis
ENSEBUG00000000622	-	92	65.272	ENSSBOG00000018921	-	75	65.272	Saimiri_boliviensis_boliviensis
ENSEBUG00000000622	-	91	63.866	ENSSHAG00000013524	APEX1	73	63.866	Sarcophilus_harrisii
ENSEBUG00000000622	-	92	58.824	ENSSFOG00015001948	apex1	76	58.824	Scleropages_formosus
ENSEBUG00000000622	-	92	59.244	ENSSMAG00000013348	apex1	75	59.244	Scophthalmus_maximus
ENSEBUG00000000622	-	92	58.824	ENSSDUG00000016377	apex1	76	58.824	Seriola_dumerili
ENSEBUG00000000622	-	92	59.664	ENSSLDG00000023005	apex1	76	59.664	Seriola_lalandi_dorsalis
ENSEBUG00000000622	-	92	60.924	ENSSPUG00000000531	APEX1	79	61.181	Sphenodon_punctatus
ENSEBUG00000000622	-	92	60.924	ENSSPAG00000000458	apex1	78	60.924	Stegastes_partitus
ENSEBUG00000000622	-	68	45.604	ENSSSCG00000039705	-	70	45.604	Sus_scrofa
ENSEBUG00000000622	-	92	64.854	ENSSSCG00000040060	-	75	64.854	Sus_scrofa
ENSEBUG00000000622	-	91	55.508	ENSTGUG00000014378	APEX1	100	55.508	Taeniopygia_guttata
ENSEBUG00000000622	-	92	59.244	ENSTRUG00000004268	apex1	72	59.244	Takifugu_rubripes
ENSEBUG00000000622	-	92	59.244	ENSTNIG00000005778	apex1	77	59.244	Tetraodon_nigroviridis
ENSEBUG00000000622	-	92	61.506	ENSTBEG00000006405	APEX1	75	61.506	Tupaia_belangeri
ENSEBUG00000000622	-	91	62.712	ENSTTRG00000007860	APEX1	100	62.712	Tursiops_truncatus
ENSEBUG00000000622	-	92	64.435	ENSUAMG00000010457	APEX1	75	64.435	Ursus_americanus
ENSEBUG00000000622	-	92	64.435	ENSUMAG00000009178	APEX1	75	64.435	Ursus_maritimus
ENSEBUG00000000622	-	91	59.322	ENSVPAG00000005083	APEX1	100	59.322	Vicugna_pacos
ENSEBUG00000000622	-	92	64.435	ENSVVUG00000009010	APEX1	75	64.435	Vulpes_vulpes
ENSEBUG00000000622	-	92	62.185	ENSXETG00000024773	apex1	75	62.185	Xenopus_tropicalis
ENSEBUG00000000622	-	92	60.084	ENSXCOG00000015233	apex1	76	60.084	Xiphophorus_couchianus
ENSEBUG00000000622	-	92	60.084	ENSXMAG00000006195	apex1	76	60.084	Xiphophorus_maculatus