EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000000778 (Gene tree)
Gene ID: -
Gene Symbol: mtrf1
Alias: zgc:113104
Full Name: mitochondrial translational release factor 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 43846 bases
Position: chrFYBX02009491.1:1419790-1463635
Accession: ZDB-GENE-050220-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000000694	RF-1	PF00472.20	2.3e-36	1	1
ENSEBUP00000000710	RF-1	PF00472.20	2.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000001016	-	2757	-	ENSEBUP00000000710	244 (aa)	-	-
ENSEBUT00000001000	-	2866	-	ENSEBUP00000000694	244 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000000778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000000778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000000778	mtrf1	73	50.847	ENSEBUG00000005616	mtrf1l	53	50.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000000778	mtrf1	96	56.838	ENSG00000120662	MTRF1	53	56.838	Homo_sapiens
ENSEBUG00000000778	mtrf1	96	56.838	ENSAMEG00000008696	MTRF1	53	56.838	Ailuropoda_melanoleuca
ENSEBUG00000000778	mtrf1	93	55.507	ENSACIG00000001495	mtrf1	92	55.507	Amphilophus_citrinellus
ENSEBUG00000000778	mtrf1	95	54.310	ENSAOCG00000002832	mtrf1	52	54.310	Amphiprion_ocellaris
ENSEBUG00000000778	mtrf1	95	53.879	ENSAPEG00000014844	mtrf1	52	53.879	Amphiprion_percula
ENSEBUG00000000778	mtrf1	94	60.699	ENSAPLG00000009317	MTRF1	53	60.699	Anas_platyrhynchos
ENSEBUG00000000778	mtrf1	98	56.904	ENSACAG00000000897	MTRF1	54	56.904	Anolis_carolinensis
ENSEBUG00000000778	mtrf1	96	50.638	ENSANAG00000023063	-	50	50.638	Aotus_nancymaae
ENSEBUG00000000778	mtrf1	96	53.846	ENSANAG00000025310	-	64	53.846	Aotus_nancymaae
ENSEBUG00000000778	mtrf1	99	54.959	ENSACLG00000023945	mtrf1	54	54.959	Astatotilapia_calliptera
ENSEBUG00000000778	mtrf1	93	55.947	ENSAMXG00000031859	mtrf1	94	55.947	Astyanax_mexicanus
ENSEBUG00000000778	mtrf1	96	55.983	ENSBTAG00000012260	MTRF1	52	55.983	Bos_taurus
ENSEBUG00000000778	mtrf1	96	57.265	ENSCJAG00000017739	MTRF1	99	57.558	Callithrix_jacchus
ENSEBUG00000000778	mtrf1	95	57.328	ENSCAFG00000004795	MTRF1	52	57.328	Canis_familiaris
ENSEBUG00000000778	mtrf1	95	57.328	ENSCAFG00020018178	MTRF1	52	57.328	Canis_lupus_dingo
ENSEBUG00000000778	mtrf1	95	56.466	ENSCHIG00000011810	MTRF1	52	56.466	Capra_hircus
ENSEBUG00000000778	mtrf1	96	55.983	ENSTSYG00000006976	MTRF1	52	55.983	Carlito_syrichta
ENSEBUG00000000778	mtrf1	96	58.547	ENSCAPG00000013163	MTRF1	54	58.547	Cavia_aperea
ENSEBUG00000000778	mtrf1	96	58.547	ENSCPOG00000005264	MTRF1	52	58.547	Cavia_porcellus
ENSEBUG00000000778	mtrf1	96	57.692	ENSCCAG00000035116	MTRF1	52	57.692	Cebus_capucinus
ENSEBUG00000000778	mtrf1	96	56.838	ENSCATG00000009909	MTRF1	53	56.838	Cercocebus_atys
ENSEBUG00000000778	mtrf1	96	57.265	ENSCLAG00000000582	MTRF1	52	57.265	Chinchilla_lanigera
ENSEBUG00000000778	mtrf1	96	56.838	ENSCSAG00000017835	MTRF1	53	56.838	Chlorocebus_sabaeus
ENSEBUG00000000778	mtrf1	93	59.735	ENSCPBG00000007969	MTRF1	50	59.735	Chrysemys_picta_bellii
ENSEBUG00000000778	mtrf1	96	56.410	ENSCANG00000040353	MTRF1	53	56.410	Colobus_angolensis_palliatus
ENSEBUG00000000778	mtrf1	96	55.983	ENSCGRG00001003065	Mtrf1	53	55.983	Cricetulus_griseus_chok1gshd
ENSEBUG00000000778	mtrf1	96	55.983	ENSCGRG00000002570	Mtrf1	53	55.983	Cricetulus_griseus_crigri
ENSEBUG00000000778	mtrf1	99	55.187	ENSCSEG00000005667	mtrf1	54	55.187	Cynoglossus_semilaevis
ENSEBUG00000000778	mtrf1	99	56.017	ENSCVAG00000021729	mtrf1	55	56.017	Cyprinodon_variegatus
ENSEBUG00000000778	mtrf1	95	51.948	ENSDARG00000033579	mtrf1	98	51.948	Danio_rerio
ENSEBUG00000000778	mtrf1	96	57.265	ENSDNOG00000034196	MTRF1	75	57.265	Dasypus_novemcinctus
ENSEBUG00000000778	mtrf1	95	59.052	ENSDORG00000016429	Mtrf1	52	59.052	Dipodomys_ordii
ENSEBUG00000000778	mtrf1	95	57.328	ENSETEG00000014811	MTRF1	52	57.328	Echinops_telfairi
ENSEBUG00000000778	mtrf1	96	56.838	ENSEASG00005015715	MTRF1	52	56.838	Equus_asinus_asinus
ENSEBUG00000000778	mtrf1	96	56.838	ENSECAG00000014389	MTRF1	51	56.838	Equus_caballus
ENSEBUG00000000778	mtrf1	96	41.102	ENSEEUG00000004450	-	53	41.102	Erinaceus_europaeus
ENSEBUG00000000778	mtrf1	94	57.205	ENSELUG00000006544	mtrf1	53	57.205	Esox_lucius
ENSEBUG00000000778	mtrf1	96	56.838	ENSFCAG00000031635	MTRF1	52	56.838	Felis_catus
ENSEBUG00000000778	mtrf1	92	59.375	ENSFALG00000008036	MTRF1	56	59.375	Ficedula_albicollis
ENSEBUG00000000778	mtrf1	96	57.692	ENSFDAG00000017881	MTRF1	52	57.692	Fukomys_damarensis
ENSEBUG00000000778	mtrf1	93	56.195	ENSFHEG00000019043	mtrf1	52	56.195	Fundulus_heteroclitus
ENSEBUG00000000778	mtrf1	94	55.652	ENSGMOG00000008608	mtrf1	60	55.652	Gadus_morhua
ENSEBUG00000000778	mtrf1	94	59.825	ENSGALG00000016951	MTRF1	50	59.825	Gallus_gallus
ENSEBUG00000000778	mtrf1	99	53.942	ENSGAFG00000007093	mtrf1	54	53.942	Gambusia_affinis
ENSEBUG00000000778	mtrf1	93	58.407	ENSGACG00000013728	mtrf1	59	58.407	Gasterosteus_aculeatus
ENSEBUG00000000778	mtrf1	82	63.317	ENSGAGG00000025696	MTRF1	63	63.317	Gopherus_agassizii
ENSEBUG00000000778	mtrf1	96	56.410	ENSGGOG00000002529	MTRF1	53	56.410	Gorilla_gorilla
ENSEBUG00000000778	mtrf1	66	49.693	ENSHBUG00000016875	-	98	49.693	Haplochromis_burtoni
ENSEBUG00000000778	mtrf1	96	55.983	ENSHGLG00000003210	MTRF1	52	55.983	Heterocephalus_glaber_female
ENSEBUG00000000778	mtrf1	96	55.983	ENSHGLG00100011843	MTRF1	52	55.983	Heterocephalus_glaber_male
ENSEBUG00000000778	mtrf1	94	55.895	ENSHCOG00000009449	mtrf1	52	55.895	Hippocampus_comes
ENSEBUG00000000778	mtrf1	96	57.692	ENSSTOG00000021682	MTRF1	53	57.692	Ictidomys_tridecemlineatus
ENSEBUG00000000778	mtrf1	96	58.974	ENSJJAG00000017590	Mtrf1	53	58.974	Jaculus_jaculus
ENSEBUG00000000778	mtrf1	99	54.733	ENSKMAG00000003231	mtrf1	54	54.733	Kryptolebias_marmoratus
ENSEBUG00000000778	mtrf1	99	54.694	ENSLBEG00000023151	mtrf1	98	54.694	Labrus_bergylta
ENSEBUG00000000778	mtrf1	99	54.694	ENSLBEG00000027169	-	98	54.694	Labrus_bergylta
ENSEBUG00000000778	mtrf1	95	58.874	ENSLACG00000010582	MTRF1	52	58.874	Latimeria_chalumnae
ENSEBUG00000000778	mtrf1	94	57.642	ENSLOCG00000005937	MTRF1	51	57.642	Lepisosteus_oculatus
ENSEBUG00000000778	mtrf1	96	44.017	ENSLAFG00000030499	-	52	44.017	Loxodonta_africana
ENSEBUG00000000778	mtrf1	96	56.838	ENSLAFG00000022177	-	52	56.838	Loxodonta_africana
ENSEBUG00000000778	mtrf1	96	56.410	ENSMFAG00000037972	MTRF1	53	56.410	Macaca_fascicularis
ENSEBUG00000000778	mtrf1	96	56.838	ENSMNEG00000035487	MTRF1	53	56.838	Macaca_nemestrina
ENSEBUG00000000778	mtrf1	96	56.838	ENSMLEG00000033582	MTRF1	53	56.838	Mandrillus_leucophaeus
ENSEBUG00000000778	mtrf1	93	55.507	ENSMAMG00000022048	mtrf1	51	55.507	Mastacembelus_armatus
ENSEBUG00000000778	mtrf1	99	54.959	ENSMZEG00005017922	mtrf1	54	54.959	Maylandia_zebra
ENSEBUG00000000778	mtrf1	95	59.149	ENSMGAG00000014971	MTRF1	56	59.149	Meleagris_gallopavo
ENSEBUG00000000778	mtrf1	96	57.265	ENSMAUG00000011661	Mtrf1	52	57.265	Mesocricetus_auratus
ENSEBUG00000000778	mtrf1	96	58.547	ENSMICG00000033131	MTRF1	53	58.547	Microcebus_murinus
ENSEBUG00000000778	mtrf1	96	57.265	ENSMOCG00000011945	Mtrf1	52	57.265	Microtus_ochrogaster
ENSEBUG00000000778	mtrf1	94	50.655	ENSMMOG00000013394	mtrf1	94	50.655	Mola_mola
ENSEBUG00000000778	mtrf1	93	57.269	ENSMODG00000014772	MTRF1	51	57.269	Monodelphis_domestica
ENSEBUG00000000778	mtrf1	96	55.745	ENSMALG00000013274	mtrf1	54	55.745	Monopterus_albus
ENSEBUG00000000778	mtrf1	96	55.983	MGP_CAROLIEiJ_G0019539	Mtrf1	52	55.983	Mus_caroli
ENSEBUG00000000778	mtrf1	96	55.983	ENSMUSG00000022022	Mtrf1	52	55.983	Mus_musculus
ENSEBUG00000000778	mtrf1	96	55.983	MGP_PahariEiJ_G0030557	Mtrf1	53	55.983	Mus_pahari
ENSEBUG00000000778	mtrf1	92	58.036	MGP_SPRETEiJ_G0020435	Mtrf1	50	58.036	Mus_spretus
ENSEBUG00000000778	mtrf1	96	56.596	ENSMPUG00000001874	MTRF1	53	56.596	Mustela_putorius_furo
ENSEBUG00000000778	mtrf1	96	58.120	ENSMLUG00000017237	MTRF1	52	58.120	Myotis_lucifugus
ENSEBUG00000000778	mtrf1	96	57.265	ENSNGAG00000014460	Mtrf1	52	57.265	Nannospalax_galili
ENSEBUG00000000778	mtrf1	94	55.459	ENSNBRG00000004634	mtrf1	97	55.459	Neolamprologus_brichardi
ENSEBUG00000000778	mtrf1	96	56.410	ENSNLEG00000001236	MTRF1	53	56.410	Nomascus_leucogenys
ENSEBUG00000000778	mtrf1	93	60.352	ENSMEUG00000001846	MTRF1	51	60.352	Notamacropus_eugenii
ENSEBUG00000000778	mtrf1	96	57.265	ENSODEG00000005782	MTRF1	53	57.265	Octodon_degus
ENSEBUG00000000778	mtrf1	95	55.411	ENSONIG00000012476	mtrf1	60	55.411	Oreochromis_niloticus
ENSEBUG00000000778	mtrf1	93	52.174	ENSOANG00000003383	-	73	52.174	Ornithorhynchus_anatinus
ENSEBUG00000000778	mtrf1	96	57.265	ENSOCUG00000025207	MTRF1	52	57.265	Oryctolagus_cuniculus
ENSEBUG00000000778	mtrf1	93	54.626	ENSORLG00000003225	mtrf1	51	54.626	Oryzias_latipes
ENSEBUG00000000778	mtrf1	93	55.507	ENSORLG00020021048	mtrf1	51	55.507	Oryzias_latipes_hni
ENSEBUG00000000778	mtrf1	98	52.500	ENSORLG00015020957	mtrf1	54	52.500	Oryzias_latipes_hsok
ENSEBUG00000000778	mtrf1	93	55.947	ENSOMEG00000002022	mtrf1	52	55.947	Oryzias_melastigma
ENSEBUG00000000778	mtrf1	87	56.132	ENSOGAG00000026411	-	73	56.132	Otolemur_garnettii
ENSEBUG00000000778	mtrf1	95	56.466	ENSOARG00000006994	MTRF1	52	56.466	Ovis_aries
ENSEBUG00000000778	mtrf1	96	56.838	ENSPPAG00000000050	MTRF1	53	56.838	Pan_paniscus
ENSEBUG00000000778	mtrf1	96	57.265	ENSPPRG00000009511	MTRF1	52	57.265	Panthera_pardus
ENSEBUG00000000778	mtrf1	96	56.838	ENSPTIG00000006673	MTRF1	52	56.838	Panthera_tigris_altaica
ENSEBUG00000000778	mtrf1	96	56.838	ENSPTRG00000005815	MTRF1	53	56.838	Pan_troglodytes
ENSEBUG00000000778	mtrf1	96	56.838	ENSPANG00000010809	MTRF1	53	56.838	Papio_anubis
ENSEBUG00000000778	mtrf1	93	54.626	ENSPKIG00000015711	mtrf1	53	54.626	Paramormyrops_kingsleyae
ENSEBUG00000000778	mtrf1	93	58.850	ENSPSIG00000004773	MTRF1	50	58.850	Pelodiscus_sinensis
ENSEBUG00000000778	mtrf1	97	54.430	ENSPMGG00000006724	mtrf1	96	54.430	Periophthalmus_magnuspinnatus
ENSEBUG00000000778	mtrf1	96	56.838	ENSPEMG00000020982	Mtrf1	52	56.838	Peromyscus_maniculatus_bairdii
ENSEBUG00000000778	mtrf1	82	64.216	ENSPMAG00000009849	mtrf1	58	64.706	Petromyzon_marinus
ENSEBUG00000000778	mtrf1	93	59.912	ENSPCIG00000012940	MTRF1	50	61.765	Phascolarctos_cinereus
ENSEBUG00000000778	mtrf1	94	55.459	ENSPFOG00000000254	mtrf1	52	55.459	Poecilia_formosa
ENSEBUG00000000778	mtrf1	94	55.895	ENSPLAG00000014280	mtrf1	52	55.895	Poecilia_latipinna
ENSEBUG00000000778	mtrf1	94	55.459	ENSPMEG00000023245	mtrf1	52	55.459	Poecilia_mexicana
ENSEBUG00000000778	mtrf1	94	53.913	ENSPREG00000018619	mtrf1	95	53.913	Poecilia_reticulata
ENSEBUG00000000778	mtrf1	96	55.983	ENSPPYG00000005313	MTRF1	53	55.983	Pongo_abelii
ENSEBUG00000000778	mtrf1	96	58.547	ENSPCOG00000018133	MTRF1	52	58.547	Propithecus_coquereli
ENSEBUG00000000778	mtrf1	95	57.576	ENSPVAG00000008573	MTRF1	52	57.576	Pteropus_vampyrus
ENSEBUG00000000778	mtrf1	99	54.508	ENSPNYG00000004357	mtrf1	99	54.508	Pundamilia_nyererei
ENSEBUG00000000778	mtrf1	93	56.388	ENSPNAG00000010682	mtrf1	52	56.388	Pygocentrus_nattereri
ENSEBUG00000000778	mtrf1	96	56.410	ENSRNOG00000047106	Mtrf1	93	61.062	Rattus_norvegicus
ENSEBUG00000000778	mtrf1	96	55.983	ENSRBIG00000007069	MTRF1	53	55.983	Rhinopithecus_bieti
ENSEBUG00000000778	mtrf1	96	55.983	ENSRROG00000035345	MTRF1	52	57.820	Rhinopithecus_roxellana
ENSEBUG00000000778	mtrf1	96	58.120	ENSSBOG00000004572	MTRF1	62	58.120	Saimiri_boliviensis_boliviensis
ENSEBUG00000000778	mtrf1	93	54.626	ENSSFOG00015006191	mtrf1	51	54.626	Scleropages_formosus
ENSEBUG00000000778	mtrf1	94	54.348	ENSSMAG00000015740	mtrf1	52	54.348	Scophthalmus_maximus
ENSEBUG00000000778	mtrf1	96	54.701	ENSSARG00000002306	MTRF1	53	54.701	Sorex_araneus
ENSEBUG00000000778	mtrf1	98	56.485	ENSSPUG00000007354	MTRF1	99	56.485	Sphenodon_punctatus
ENSEBUG00000000778	mtrf1	95	53.017	ENSSPAG00000000881	mtrf1	52	53.017	Stegastes_partitus
ENSEBUG00000000778	mtrf1	96	57.692	ENSSSCG00000009436	MTRF1	52	57.692	Sus_scrofa
ENSEBUG00000000778	mtrf1	92	58.482	ENSTGUG00000012422	MTRF1	54	58.482	Taeniopygia_guttata
ENSEBUG00000000778	mtrf1	98	52.941	ENSTRUG00000000396	mtrf1	53	52.941	Takifugu_rubripes
ENSEBUG00000000778	mtrf1	89	58.986	ENSTNIG00000017149	-	61	56.596	Tetraodon_nigroviridis
ENSEBUG00000000778	mtrf1	82	47.739	ENSTBEG00000004696	-	83	47.739	Tupaia_belangeri
ENSEBUG00000000778	mtrf1	96	56.410	ENSTTRG00000010370	MTRF1	52	56.410	Tursiops_truncatus
ENSEBUG00000000778	mtrf1	96	56.838	ENSUMAG00000014772	MTRF1	53	56.838	Ursus_maritimus
ENSEBUG00000000778	mtrf1	96	57.021	ENSVPAG00000002565	MTRF1	53	57.021	Vicugna_pacos
ENSEBUG00000000778	mtrf1	95	57.328	ENSVVUG00000028755	MTRF1	52	57.328	Vulpes_vulpes
ENSEBUG00000000778	mtrf1	94	59.389	ENSXETG00000018904	mtrf1	59	59.389	Xenopus_tropicalis
ENSEBUG00000000778	mtrf1	90	55.000	ENSXCOG00000020386	mtrf1	93	55.000	Xiphophorus_couchianus
ENSEBUG00000000778	mtrf1	99	54.357	ENSXMAG00000009853	mtrf1	54	54.357	Xiphophorus_maculatus