EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000000860 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 33223 bases
Position: chrFYBX02010517.1:1954023-1987245
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000000824	zf-C2H2	PF00096.26	1.4e-31	1	6
ENSEBUP00000000824	zf-C2H2	PF00096.26	1.4e-31	2	6
ENSEBUP00000000824	zf-C2H2	PF00096.26	1.4e-31	3	6
ENSEBUP00000000824	zf-C2H2	PF00096.26	1.4e-31	4	6
ENSEBUP00000000824	zf-C2H2	PF00096.26	1.4e-31	5	6
ENSEBUP00000000824	zf-C2H2	PF00096.26	1.4e-31	6	6
ENSEBUP00000000835	zf-C2H2	PF00096.26	1.4e-31	1	6
ENSEBUP00000000835	zf-C2H2	PF00096.26	1.4e-31	2	6
ENSEBUP00000000835	zf-C2H2	PF00096.26	1.4e-31	3	6
ENSEBUP00000000835	zf-C2H2	PF00096.26	1.4e-31	4	6
ENSEBUP00000000835	zf-C2H2	PF00096.26	1.4e-31	5	6
ENSEBUP00000000835	zf-C2H2	PF00096.26	1.4e-31	6	6
ENSEBUP00000000824	zf-met	PF12874.7	0.00021	1	1
ENSEBUP00000000835	zf-met	PF12874.7	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000001130	-	1862	-	ENSEBUP00000000824	542 (aa)	-	-
ENSEBUT00000001141	-	2511	-	ENSEBUP00000000835	542 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000000860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000000860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000000860	-	88	47.097	ENSEBUG00000000967	-	95	47.097
ENSEBUG00000000860	-	57	46.897	ENSEBUG00000008025	-	73	46.897
ENSEBUG00000000860	-	71	43.443	ENSEBUG00000016292	-	80	43.443
ENSEBUG00000000860	-	72	48.538	ENSEBUG00000003232	-	90	48.538
ENSEBUG00000000860	-	99	42.373	ENSEBUG00000005913	-	99	42.373
ENSEBUG00000000860	-	70	45.833	ENSEBUG00000013126	-	95	45.714
ENSEBUG00000000860	-	73	48.128	ENSEBUG00000008229	-	83	48.634
ENSEBUG00000000860	-	99	47.120	ENSEBUG00000008039	-	98	47.340
ENSEBUG00000000860	-	50	44.706	ENSEBUG00000016281	-	98	44.706
ENSEBUG00000000860	-	51	45.333	ENSEBUG00000007980	-	79	45.333
ENSEBUG00000000860	-	60	54.217	ENSEBUG00000004992	-	69	54.217
ENSEBUG00000000860	-	51	38.686	ENSEBUG00000003573	-	88	38.686
ENSEBUG00000000860	-	100	33.106	ENSEBUG00000014469	-	86	45.833
ENSEBUG00000000860	-	67	45.161	ENSEBUG00000012543	-	74	46.203
ENSEBUG00000000860	-	90	52.542	ENSEBUG00000007563	-	99	52.542
ENSEBUG00000000860	-	99	47.849	ENSEBUG00000013622	-	99	48.864
ENSEBUG00000000860	-	61	44.444	ENSEBUG00000010472	-	85	44.444
ENSEBUG00000000860	-	69	47.904	ENSEBUG00000011435	-	96	42.105
ENSEBUG00000000860	-	99	49.419	ENSEBUG00000011837	-	98	49.419
ENSEBUG00000000860	-	51	43.038	ENSEBUG00000001826	-	54	43.038
ENSEBUG00000000860	-	100	46.629	ENSEBUG00000006092	-	98	46.629
ENSEBUG00000000860	-	51	51.678	ENSEBUG00000017017	-	59	53.125
ENSEBUG00000000860	-	99	47.853	ENSEBUG00000011764	-	97	47.853
ENSEBUG00000000860	-	99	49.143	ENSEBUG00000002146	-	95	49.143
ENSEBUG00000000860	-	51	49.419	ENSEBUG00000013157	-	89	47.414
ENSEBUG00000000860	-	60	51.685	ENSEBUG00000011751	-	84	52.033
ENSEBUG00000000860	-	70	50.857	ENSEBUG00000009330	-	88	51.462
ENSEBUG00000000860	-	99	48.087	ENSEBUG00000007054	-	79	48.087
ENSEBUG00000000860	-	69	51.176	ENSEBUG00000014040	-	58	51.176
ENSEBUG00000000860	-	61	43.407	ENSEBUG00000006233	-	94	36.364
ENSEBUG00000000860	-	98	48.993	ENSEBUG00000001741	-	97	48.993
ENSEBUG00000000860	-	89	51.124	ENSEBUG00000010031	-	93	51.124
ENSEBUG00000000860	-	98	45.181	ENSEBUG00000005200	-	96	33.083
ENSEBUG00000000860	-	59	52.288	ENSEBUG00000013874	-	76	52.288
ENSEBUG00000000860	-	99	32.657	ENSEBUG00000014227	-	90	51.656
ENSEBUG00000000860	-	98	52.353	ENSEBUG00000002721	-	98	52.353
ENSEBUG00000000860	-	65	47.857	ENSEBUG00000010878	-	99	47.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000000860	-	63	39.888	ENSAOCG00000000655	-	89	40.588	Amphiprion_ocellaris
ENSEBUG00000000860	-	66	41.803	ENSAPEG00000012963	-	95	41.803	Amphiprion_percula
ENSEBUG00000000860	-	51	46.386	ENSDARG00000098536	si:dkey-25i10.1	78	46.386	Danio_rerio
ENSEBUG00000000860	-	51	41.589	ENSDARG00000100509	si:dkey-82i20.2	72	43.478	Danio_rerio
ENSEBUG00000000860	-	56	45.033	ENSLBEG00000004867	-	67	45.638	Labrus_bergylta
ENSEBUG00000000860	-	61	41.618	ENSLBEG00000000393	-	57	45.890	Labrus_bergylta
ENSEBUG00000000860	-	58	44.248	ENSSPAG00000015809	-	90	44.248	Stegastes_partitus
ENSEBUG00000000860	-	52	38.462	ENSXMAG00000026601	-	62	43.182	Xiphophorus_maculatus