EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000000963 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 30547 bases
Position: chrFYBX02010781.1:1854058-1884604
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000001004	MMR_HSR1	PF01926.23	3.7e-05	1	1
ENSEBUP00000000994	MMR_HSR1	PF01926.23	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000001308	-	2314	-	ENSEBUP00000000994	208 (aa)	-	-
ENSEBUT00000001290	-	2092	-	ENSEBUP00000000977	222 (aa)	-	-
ENSEBUT00000001318	-	801	-	ENSEBUP00000001004	178 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000000963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000000963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000000963	-	87	40.000	ENSEBUG00000006581	rab12	78	40.252
ENSEBUG00000000963	-	84	37.748	ENSEBUG00000003784	rhebl1	93	37.748
ENSEBUG00000000963	-	84	35.032	ENSEBUG00000004967	rab9b	79	34.545
ENSEBUG00000000963	-	85	38.411	ENSEBUG00000011775	rab11ba	76	36.478
ENSEBUG00000000963	-	94	35.859	ENSEBUG00000015845	-	90	35.859
ENSEBUG00000000963	-	83	33.108	ENSEBUG00000015012	kras	83	32.278
ENSEBUG00000000963	-	89	32.515	ENSEBUG00000014186	-	68	33.333
ENSEBUG00000000963	-	85	35.443	ENSEBUG00000002259	RAB29	75	35.443
ENSEBUG00000000963	-	85	41.447	ENSEBUG00000015886	-	79	41.509
ENSEBUG00000000963	-	91	34.146	ENSEBUG00000013908	rasd3	77	34.146
ENSEBUG00000000963	-	95	35.377	ENSEBUG00000009003	-	90	35.377
ENSEBUG00000000963	-	94	35.385	ENSEBUG00000003339	-	96	35.385
ENSEBUG00000000963	-	68	31.148	ENSEBUG00000004741	arl4cb	59	31.148
ENSEBUG00000000963	-	86	35.948	ENSEBUG00000012680	-	66	36.076
ENSEBUG00000000963	-	92	36.970	ENSEBUG00000015447	-	76	36.970
ENSEBUG00000000963	-	92	35.758	ENSEBUG00000007493	rab11a	94	31.373
ENSEBUG00000000963	-	68	31.148	ENSEBUG00000005056	arl4aa	59	31.008
ENSEBUG00000000963	-	88	46.154	ENSEBUG00000014794	rab5c	87	42.162
ENSEBUG00000000963	-	88	36.585	ENSEBUG00000008934	rab36	63	37.059
ENSEBUG00000000963	-	94	32.487	ENSEBUG00000011510	-	93	32.487
ENSEBUG00000000963	-	84	35.762	ENSEBUG00000002306	rheb	88	34.969
ENSEBUG00000000963	-	89	36.646	ENSEBUG00000004971	-	79	36.047
ENSEBUG00000000963	-	87	31.613	ENSEBUG00000004670	hrasb	83	31.646
ENSEBUG00000000963	-	87	35.484	ENSEBUG00000010861	-	63	35.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000000963	-	100	90.385	ENSG00000154917	RAB6B	100	100.000	Homo_sapiens
ENSEBUG00000000963	-	100	87.981	ENSAPOG00000016512	-	100	87.981	Acanthochromis_polyacanthus
ENSEBUG00000000963	-	100	86.538	ENSAPOG00000014397	rab6bb	100	86.538	Acanthochromis_polyacanthus
ENSEBUG00000000963	-	100	89.423	ENSAPOG00000019100	rab6ba	100	89.423	Acanthochromis_polyacanthus
ENSEBUG00000000963	-	100	90.385	ENSAMEG00000000252	RAB6B	100	90.385	Ailuropoda_melanoleuca
ENSEBUG00000000963	-	93	95.181	ENSACIG00000007154	rab6ba	93	88.500	Amphilophus_citrinellus
ENSEBUG00000000963	-	93	92.169	ENSACIG00000014094	rab6bb	100	82.692	Amphilophus_citrinellus
ENSEBUG00000000963	-	100	89.423	ENSAOCG00000002298	rab6ba	100	89.423	Amphiprion_ocellaris
ENSEBUG00000000963	-	100	86.538	ENSAOCG00000011103	rab6bb	100	86.538	Amphiprion_ocellaris
ENSEBUG00000000963	-	93	95.181	ENSAPEG00000020892	rab6ba	99	92.063	Amphiprion_percula
ENSEBUG00000000963	-	100	86.538	ENSAPEG00000007731	rab6bb	100	86.538	Amphiprion_percula
ENSEBUG00000000963	-	100	88.462	ENSAPEG00000005857	-	100	88.462	Amphiprion_percula
ENSEBUG00000000963	-	93	92.169	ENSATEG00000011879	rab6bb	100	79.621	Anabas_testudineus
ENSEBUG00000000963	-	100	90.385	ENSANAG00000017472	RAB6B	100	90.385	Aotus_nancymaae
ENSEBUG00000000963	-	100	86.538	ENSACLG00000026487	rab6bb	100	86.538	Astatotilapia_calliptera
ENSEBUG00000000963	-	100	89.904	ENSACLG00000025138	rab6ba	100	89.904	Astatotilapia_calliptera
ENSEBUG00000000963	-	93	95.181	ENSAMXG00000004630	rab6ba	100	89.418	Astyanax_mexicanus
ENSEBUG00000000963	-	100	89.904	ENSBTAG00000000905	RAB6B	100	89.904	Bos_taurus
ENSEBUG00000000963	-	91	91.358	WBGene00004270	rab-6.2	99	77.941	Caenorhabditis_elegans
ENSEBUG00000000963	-	100	90.385	ENSCAFG00020027569	RAB6B	100	90.385	Canis_lupus_dingo
ENSEBUG00000000963	-	100	90.385	ENSCHIG00000016452	RAB6B	100	90.385	Capra_hircus
ENSEBUG00000000963	-	100	90.385	ENSCPOG00000038813	RAB6B	100	90.385	Cavia_porcellus
ENSEBUG00000000963	-	100	90.385	ENSCCAG00000035269	RAB6B	100	90.385	Cebus_capucinus
ENSEBUG00000000963	-	100	90.385	ENSCATG00000041263	RAB6B	100	90.385	Cercocebus_atys
ENSEBUG00000000963	-	100	90.385	ENSCSAG00000010704	RAB6B	100	90.385	Chlorocebus_sabaeus
ENSEBUG00000000963	-	100	89.423	ENSCPBG00000021406	RAB6B	100	89.423	Chrysemys_picta_bellii
ENSEBUG00000000963	-	100	90.385	ENSCANG00000029838	RAB6B	100	90.385	Colobus_angolensis_palliatus
ENSEBUG00000000963	-	100	90.385	ENSCGRG00001013041	Rab6b	100	90.385	Cricetulus_griseus_chok1gshd
ENSEBUG00000000963	-	100	86.538	ENSCSEG00000016556	rab6bb	100	86.538	Cynoglossus_semilaevis
ENSEBUG00000000963	-	100	85.577	ENSCSEG00000003122	rab6ba	100	85.577	Cynoglossus_semilaevis
ENSEBUG00000000963	-	100	86.058	ENSCVAG00000004751	rab6bb	100	86.058	Cyprinodon_variegatus
ENSEBUG00000000963	-	100	88.942	ENSCVAG00000012889	rab6ba	100	88.942	Cyprinodon_variegatus
ENSEBUG00000000963	-	100	90.385	ENSDARG00000034522	rab6ba	100	90.385	Danio_rerio
ENSEBUG00000000963	-	100	85.096	ENSDARG00000031343	rab6bb	100	85.096	Danio_rerio
ENSEBUG00000000963	-	100	90.385	ENSDORG00000026441	Rab6b	100	90.385	Dipodomys_ordii
ENSEBUG00000000963	-	100	87.981	ENSELUG00000001257	rab6ba	100	87.981	Esox_lucius
ENSEBUG00000000963	-	100	86.538	ENSELUG00000022470	rab6bb	100	86.538	Esox_lucius
ENSEBUG00000000963	-	100	90.385	ENSFCAG00000040897	RAB6B	100	90.385	Felis_catus
ENSEBUG00000000963	-	100	90.385	ENSFDAG00000005525	RAB6B	100	90.385	Fukomys_damarensis
ENSEBUG00000000963	-	93	92.771	ENSFHEG00000001477	-	75	89.418	Fundulus_heteroclitus
ENSEBUG00000000963	-	100	86.538	ENSFHEG00000022524	rab6bb	100	86.538	Fundulus_heteroclitus
ENSEBUG00000000963	-	100	86.538	ENSGAFG00000010916	rab6bb	100	86.538	Gambusia_affinis
ENSEBUG00000000963	-	100	89.904	ENSGAFG00000017270	rab6ba	100	89.904	Gambusia_affinis
ENSEBUG00000000963	-	100	85.581	ENSGACG00000003726	rab6ba	100	85.581	Gasterosteus_aculeatus
ENSEBUG00000000963	-	100	86.538	ENSGACG00000013721	rab6bb	100	86.538	Gasterosteus_aculeatus
ENSEBUG00000000963	-	100	88.942	ENSGAGG00000022371	-	100	88.942	Gopherus_agassizii
ENSEBUG00000000963	-	100	90.385	ENSGGOG00000028342	RAB6B	100	90.385	Gorilla_gorilla
ENSEBUG00000000963	-	96	89.474	ENSHBUG00000003230	rab6bb	100	80.288	Haplochromis_burtoni
ENSEBUG00000000963	-	100	89.904	ENSHBUG00000012905	rab6ba	100	89.904	Haplochromis_burtoni
ENSEBUG00000000963	-	100	90.385	ENSHGLG00000016898	RAB6B	100	90.385	Heterocephalus_glaber_female
ENSEBUG00000000963	-	100	90.385	ENSHGLG00100016679	RAB6B	100	90.385	Heterocephalus_glaber_male
ENSEBUG00000000963	-	100	87.019	ENSHCOG00000014711	rab6ba	100	87.019	Hippocampus_comes
ENSEBUG00000000963	-	100	87.019	ENSHCOG00000013130	rab6bb	100	87.019	Hippocampus_comes
ENSEBUG00000000963	-	100	86.538	ENSIPUG00000018098	rab6b	100	86.538	Ictalurus_punctatus
ENSEBUG00000000963	-	100	89.423	ENSIPUG00000015058	rab6b	100	89.423	Ictalurus_punctatus
ENSEBUG00000000963	-	100	90.385	ENSSTOG00000014123	RAB6B	100	90.385	Ictidomys_tridecemlineatus
ENSEBUG00000000963	-	100	89.423	ENSKMAG00000015507	rab6ba	100	89.423	Kryptolebias_marmoratus
ENSEBUG00000000963	-	99	89.372	ENSKMAG00000002545	-	98	89.372	Kryptolebias_marmoratus
ENSEBUG00000000963	-	100	86.058	ENSKMAG00000011278	rab6bb	100	86.058	Kryptolebias_marmoratus
ENSEBUG00000000963	-	100	88.942	ENSLBEG00000026930	rab6ba	100	88.942	Labrus_bergylta
ENSEBUG00000000963	-	100	86.538	ENSLBEG00000019372	rab6bb	100	86.538	Labrus_bergylta
ENSEBUG00000000963	-	93	95.181	ENSLAFG00000009905	RAB6B	100	92.593	Loxodonta_africana
ENSEBUG00000000963	-	100	90.385	ENSMFAG00000032149	RAB6B	100	90.385	Macaca_fascicularis
ENSEBUG00000000963	-	100	90.385	ENSMMUG00000008919	RAB6B	100	90.385	Macaca_mulatta
ENSEBUG00000000963	-	100	90.385	ENSMNEG00000037540	RAB6B	100	90.385	Macaca_nemestrina
ENSEBUG00000000963	-	100	86.538	ENSMAMG00000012233	rab6bb	100	86.538	Mastacembelus_armatus
ENSEBUG00000000963	-	100	89.423	ENSMAMG00000009672	rab6ba	100	89.423	Mastacembelus_armatus
ENSEBUG00000000963	-	100	89.904	ENSMZEG00005008991	rab6ba	100	89.904	Maylandia_zebra
ENSEBUG00000000963	-	99	89.372	ENSMZEG00005005866	-	98	89.372	Maylandia_zebra
ENSEBUG00000000963	-	100	86.538	ENSMZEG00005025464	rab6bb	100	86.538	Maylandia_zebra
ENSEBUG00000000963	-	100	90.385	ENSMICG00000049590	RAB6B	100	90.385	Microcebus_murinus
ENSEBUG00000000963	-	100	90.385	ENSMOCG00000001455	Rab6b	100	90.385	Microtus_ochrogaster
ENSEBUG00000000963	-	93	93.976	ENSMMOG00000006947	rab6ba	100	86.058	Mola_mola
ENSEBUG00000000963	-	100	86.538	ENSMMOG00000018976	rab6bb	100	86.538	Mola_mola
ENSEBUG00000000963	-	100	90.385	ENSMODG00000018494	RAB6B	100	90.385	Monodelphis_domestica
ENSEBUG00000000963	-	100	86.538	ENSMALG00000017417	rab6bb	100	86.538	Monopterus_albus
ENSEBUG00000000963	-	100	88.462	ENSMALG00000015854	rab6ba	100	88.462	Monopterus_albus
ENSEBUG00000000963	-	100	90.385	MGP_CAROLIEiJ_G0032585	Rab6b	100	90.385	Mus_caroli
ENSEBUG00000000963	-	100	90.385	ENSMUSG00000032549	Rab6b	100	90.385	Mus_musculus
ENSEBUG00000000963	-	100	90.385	MGP_PahariEiJ_G0015453	Rab6b	100	90.385	Mus_pahari
ENSEBUG00000000963	-	100	90.385	MGP_SPRETEiJ_G0033730	Rab6b	100	90.385	Mus_spretus
ENSEBUG00000000963	-	100	90.385	ENSNGAG00000020441	Rab6b	100	90.385	Nannospalax_galili
ENSEBUG00000000963	-	100	89.904	ENSNBRG00000013673	rab6ba	100	89.904	Neolamprologus_brichardi
ENSEBUG00000000963	-	96	90.058	ENSNBRG00000015905	rab6bb	100	81.250	Neolamprologus_brichardi
ENSEBUG00000000963	-	93	95.152	ENSNLEG00000003675	RAB6B	100	84.615	Nomascus_leucogenys
ENSEBUG00000000963	-	100	90.385	ENSOPRG00000001164	RAB6B	100	90.385	Ochotona_princeps
ENSEBUG00000000963	-	100	86.538	ENSONIG00000009886	rab6bb	100	86.538	Oreochromis_niloticus
ENSEBUG00000000963	-	100	89.904	ENSOCUG00000009428	RAB6B	100	89.904	Oryctolagus_cuniculus
ENSEBUG00000000963	-	100	86.538	ENSORLG00000016290	rab6bb	100	86.538	Oryzias_latipes
ENSEBUG00000000963	-	100	86.538	ENSORLG00020013337	rab6bb	100	86.538	Oryzias_latipes_hni
ENSEBUG00000000963	-	100	87.442	ENSORLG00020010772	rab6ba	100	87.442	Oryzias_latipes_hni
ENSEBUG00000000963	-	100	86.538	ENSORLG00015013537	rab6bb	100	86.538	Oryzias_latipes_hsok
ENSEBUG00000000963	-	100	90.385	ENSORLG00015006970	rab6ba	100	90.385	Oryzias_latipes_hsok
ENSEBUG00000000963	-	100	86.538	ENSOMEG00000023625	rab6bb	100	86.538	Oryzias_melastigma
ENSEBUG00000000963	-	100	90.385	ENSOMEG00000014206	rab6ba	100	90.385	Oryzias_melastigma
ENSEBUG00000000963	-	100	90.385	ENSOGAG00000005245	RAB6B	100	90.385	Otolemur_garnettii
ENSEBUG00000000963	-	100	90.385	ENSPPAG00000042439	RAB6B	100	90.385	Pan_paniscus
ENSEBUG00000000963	-	100	90.385	ENSPPRG00000023437	RAB6B	100	90.385	Panthera_pardus
ENSEBUG00000000963	-	100	90.385	ENSPTRG00000048374	RAB6B	100	90.385	Pan_troglodytes
ENSEBUG00000000963	-	100	90.385	ENSPANG00000009221	RAB6B	100	90.385	Papio_anubis
ENSEBUG00000000963	-	100	88.942	ENSPKIG00000003261	-	100	88.942	Paramormyrops_kingsleyae
ENSEBUG00000000963	-	100	86.538	ENSPKIG00000024232	-	100	86.538	Paramormyrops_kingsleyae
ENSEBUG00000000963	-	98	89.655	ENSPMGG00000015233	rab6bb	100	80.288	Periophthalmus_magnuspinnatus
ENSEBUG00000000963	-	100	90.385	ENSPCIG00000010292	-	100	90.385	Phascolarctos_cinereus
ENSEBUG00000000963	-	100	89.904	ENSPFOG00000003742	rab6ba	100	89.904	Poecilia_formosa
ENSEBUG00000000963	-	100	89.904	ENSPLAG00000022260	rab6ba	100	89.904	Poecilia_latipinna
ENSEBUG00000000963	-	100	86.538	ENSPLAG00000019707	rab6bb	100	86.538	Poecilia_latipinna
ENSEBUG00000000963	-	100	89.904	ENSPMEG00000019167	rab6ba	100	89.904	Poecilia_mexicana
ENSEBUG00000000963	-	100	86.538	ENSPMEG00000021872	rab6bb	100	86.538	Poecilia_mexicana
ENSEBUG00000000963	-	93	95.783	ENSPREG00000015480	rab6ba	93	93.548	Poecilia_reticulata
ENSEBUG00000000963	-	100	90.385	ENSPPYG00000014116	RAB6B	100	90.385	Pongo_abelii
ENSEBUG00000000963	-	100	89.904	ENSPCAG00000013887	RAB6B	100	89.904	Procavia_capensis
ENSEBUG00000000963	-	100	90.385	ENSPCOG00000018146	RAB6B	100	90.385	Propithecus_coquereli
ENSEBUG00000000963	-	96	89.474	ENSPNYG00000010861	rab6bb	100	80.288	Pundamilia_nyererei
ENSEBUG00000000963	-	100	89.904	ENSPNYG00000019963	rab6ba	99	92.063	Pundamilia_nyererei
ENSEBUG00000000963	-	100	87.019	ENSPNAG00000010157	rab6bb	100	87.019	Pygocentrus_nattereri
ENSEBUG00000000963	-	100	90.385	ENSPNAG00000028379	rab6ba	100	90.385	Pygocentrus_nattereri
ENSEBUG00000000963	-	100	87.500	ENSPNAG00000005519	-	100	87.500	Pygocentrus_nattereri
ENSEBUG00000000963	-	100	90.385	ENSRNOG00000009198	Rab6b	100	90.385	Rattus_norvegicus
ENSEBUG00000000963	-	100	90.385	ENSRBIG00000031164	RAB6B	100	90.385	Rhinopithecus_bieti
ENSEBUG00000000963	-	100	90.385	ENSRROG00000030454	RAB6B	100	90.385	Rhinopithecus_roxellana
ENSEBUG00000000963	-	100	90.385	ENSSBOG00000032178	RAB6B	100	90.385	Saimiri_boliviensis_boliviensis
ENSEBUG00000000963	-	100	89.423	ENSSFOG00015019202	RAB6B	100	89.423	Scleropages_formosus
ENSEBUG00000000963	-	100	86.538	ENSSMAG00000000335	rab6bb	100	86.538	Scophthalmus_maximus
ENSEBUG00000000963	-	100	86.538	ENSSDUG00000009251	rab6bb	100	86.538	Seriola_dumerili
ENSEBUG00000000963	-	100	89.423	ENSSDUG00000021882	rab6ba	100	89.423	Seriola_dumerili
ENSEBUG00000000963	-	99	87.923	ENSSDUG00000018970	RAB6B	98	87.923	Seriola_dumerili
ENSEBUG00000000963	-	100	89.423	ENSSLDG00000003264	rab6ba	100	89.423	Seriola_lalandi_dorsalis
ENSEBUG00000000963	-	100	86.538	ENSSLDG00000012474	rab6bb	100	86.538	Seriola_lalandi_dorsalis
ENSEBUG00000000963	-	100	89.423	ENSSPAG00000017366	rab6ba	100	89.423	Stegastes_partitus
ENSEBUG00000000963	-	100	86.538	ENSSPAG00000009276	rab6bb	100	86.538	Stegastes_partitus
ENSEBUG00000000963	-	100	90.385	ENSSSCG00000036503	RAB6B	100	90.385	Sus_scrofa
ENSEBUG00000000963	-	100	86.538	ENSTRUG00000004881	rab6bb	100	86.538	Takifugu_rubripes
ENSEBUG00000000963	-	100	86.538	ENSTNIG00000015257	rab6bb	100	86.538	Tetraodon_nigroviridis
ENSEBUG00000000963	-	100	90.385	ENSVVUG00000005711	RAB6B	100	90.385	Vulpes_vulpes
ENSEBUG00000000963	-	100	86.538	ENSXCOG00000002232	rab6bb	100	86.538	Xiphophorus_couchianus
ENSEBUG00000000963	-	100	86.538	ENSXMAG00000015903	rab6bb	100	86.538	Xiphophorus_maculatus
ENSEBUG00000000963	-	100	89.904	ENSXMAG00000016638	rab6ba	100	89.904	Xiphophorus_maculatus