EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000001181 (Gene tree)
Gene ID: -
Gene Symbol: poldip3
Alias: -
Full Name: polymerase (DNA-directed)%2C delta interacting protein 3
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 139027 bases
Position: chrFYBX02010146.1:2583459-2722485
Accession: ZDB-GENE-120201-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000001331	RRM_1	PF00076.22	1.8e-10	1	1
ENSEBUP00000001320	RRM_1	PF00076.22	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000001643	-	1786	-	ENSEBUP00000001320	446 (aa)	-	-
ENSEBUT00000001654	-	1705	-	ENSEBUP00000001331	419 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000001181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000001181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000001181	poldip3	93	38.626	ENSG00000100227	POLDIP3	100	38.717	Homo_sapiens
ENSEBUG00000001181	poldip3	93	38.546	ENSAMEG00000009522	POLDIP3	98	38.546	Ailuropoda_melanoleuca
ENSEBUG00000001181	poldip3	93	34.694	ENSACIG00000023100	poldip3	100	34.921	Amphilophus_citrinellus
ENSEBUG00000001181	poldip3	82	38.155	ENSAPLG00000005154	POLDIP3	92	38.025	Anas_platyrhynchos
ENSEBUG00000001181	poldip3	93	36.923	ENSACAG00000003515	POLDIP3	98	36.923	Anolis_carolinensis
ENSEBUG00000001181	poldip3	93	38.756	ENSANAG00000033566	-	100	38.955	Aotus_nancymaae
ENSEBUG00000001181	poldip3	93	31.762	ENSACLG00000016753	poldip3	86	32.172	Astatotilapia_calliptera
ENSEBUG00000001181	poldip3	93	38.372	ENSBTAG00000016511	POLDIP3	100	38.642	Bos_taurus
ENSEBUG00000001181	poldip3	93	39.024	ENSCJAG00000009628	POLDIP3	100	39.024	Callithrix_jacchus
ENSEBUG00000001181	poldip3	93	39.198	ENSCAFG00000000959	POLDIP3	100	38.926	Canis_familiaris
ENSEBUG00000001181	poldip3	93	40.241	ENSCAFG00020000227	POLDIP3	100	40.241	Canis_lupus_dingo
ENSEBUG00000001181	poldip3	93	37.251	ENSCHIG00000020171	POLDIP3	100	37.251	Capra_hircus
ENSEBUG00000001181	poldip3	93	38.902	ENSTSYG00000007189	POLDIP3	100	39.857	Carlito_syrichta
ENSEBUG00000001181	poldip3	86	39.440	ENSCAPG00000006798	POLDIP3	98	39.440	Cavia_aperea
ENSEBUG00000001181	poldip3	93	39.810	ENSCPOG00000019524	POLDIP3	100	40.133	Cavia_porcellus
ENSEBUG00000001181	poldip3	93	38.756	ENSCCAG00000027969	-	100	38.995	Cebus_capucinus
ENSEBUG00000001181	poldip3	93	35.437	ENSCCAG00000011395	-	100	35.437	Cebus_capucinus
ENSEBUG00000001181	poldip3	93	38.863	ENSCATG00000029583	POLDIP3	100	38.955	Cercocebus_atys
ENSEBUG00000001181	poldip3	93	37.391	ENSCLAG00000016864	POLDIP3	100	37.819	Chinchilla_lanigera
ENSEBUG00000001181	poldip3	93	38.479	ENSCSAG00000005654	POLDIP3	100	38.479	Chlorocebus_sabaeus
ENSEBUG00000001181	poldip3	93	37.307	ENSCPBG00000021819	POLDIP3	87	37.307	Chrysemys_picta_bellii
ENSEBUG00000001181	poldip3	93	38.389	ENSCANG00000027664	POLDIP3	100	38.955	Colobus_angolensis_palliatus
ENSEBUG00000001181	poldip3	93	38.534	ENSCGRG00001004211	-	100	39.007	Cricetulus_griseus_chok1gshd
ENSEBUG00000001181	poldip3	90	37.264	ENSCGRG00000009374	-	100	38.386	Cricetulus_griseus_crigri
ENSEBUG00000001181	poldip3	93	34.012	ENSCSEG00000007165	poldip3	100	34.623	Cynoglossus_semilaevis
ENSEBUG00000001181	poldip3	93	45.238	ENSDNOG00000037211	-	100	38.307	Dasypus_novemcinctus
ENSEBUG00000001181	poldip3	93	38.462	ENSDORG00000006590	Poldip3	100	38.426	Dipodomys_ordii
ENSEBUG00000001181	poldip3	93	36.364	ENSETEG00000018022	POLDIP3	100	36.364	Echinops_telfairi
ENSEBUG00000001181	poldip3	93	37.748	ENSEASG00005000795	POLDIP3	100	37.748	Equus_asinus_asinus
ENSEBUG00000001181	poldip3	93	37.748	ENSECAG00000018350	POLDIP3	100	37.748	Equus_caballus
ENSEBUG00000001181	poldip3	55	77.333	ENSEEUG00000001290	POLDIP3	62	77.333	Erinaceus_europaeus
ENSEBUG00000001181	poldip3	61	53.503	ENSELUG00000009005	poldip3	90	34.328	Esox_lucius
ENSEBUG00000001181	poldip3	93	38.318	ENSFCAG00000032029	POLDIP3	100	38.876	Felis_catus
ENSEBUG00000001181	poldip3	93	37.900	ENSFALG00000011621	POLDIP3	86	38.235	Ficedula_albicollis
ENSEBUG00000001181	poldip3	93	38.915	ENSFDAG00000019550	POLDIP3	100	38.915	Fukomys_damarensis
ENSEBUG00000001181	poldip3	93	35.664	ENSFHEG00000006083	poldip3	100	36.552	Fundulus_heteroclitus
ENSEBUG00000001181	poldip3	93	36.830	ENSGMOG00000006232	poldip3	100	37.269	Gadus_morhua
ENSEBUG00000001181	poldip3	93	37.916	ENSGALG00000011863	POLDIP3	100	37.916	Gallus_gallus
ENSEBUG00000001181	poldip3	93	35.593	ENSGACG00000007224	poldip3	100	35.897	Gasterosteus_aculeatus
ENSEBUG00000001181	poldip3	93	37.748	ENSGAGG00000014629	POLDIP3	97	37.748	Gopherus_agassizii
ENSEBUG00000001181	poldip3	93	38.626	ENSGGOG00000014961	POLDIP3	100	38.717	Gorilla_gorilla
ENSEBUG00000001181	poldip3	93	31.902	ENSHBUG00000021806	poldip3	83	32.106	Haplochromis_burtoni
ENSEBUG00000001181	poldip3	93	38.462	ENSHGLG00000013156	POLDIP3	100	38.425	Heterocephalus_glaber_female
ENSEBUG00000001181	poldip3	93	38.462	ENSHGLG00100009086	POLDIP3	100	38.425	Heterocephalus_glaber_male
ENSEBUG00000001181	poldip3	56	52.695	ENSHCOG00000005823	poldip3	54	53.988	Hippocampus_comes
ENSEBUG00000001181	poldip3	96	35.918	ENSIPUG00000000564	poldip3	100	36.700	Ictalurus_punctatus
ENSEBUG00000001181	poldip3	87	37.438	ENSSTOG00000008230	POLDIP3	98	38.718	Ictidomys_tridecemlineatus
ENSEBUG00000001181	poldip3	93	37.793	ENSJJAG00000018034	Poldip3	100	38.028	Jaculus_jaculus
ENSEBUG00000001181	poldip3	93	38.411	ENSLAFG00000014901	POLDIP3	98	38.411	Loxodonta_africana
ENSEBUG00000001181	poldip3	93	38.626	ENSMFAG00000044670	POLDIP3	100	38.588	Macaca_fascicularis
ENSEBUG00000001181	poldip3	93	38.255	ENSMMUG00000047046	POLDIP3	100	38.255	Macaca_mulatta
ENSEBUG00000001181	poldip3	93	38.863	ENSMNEG00000037068	POLDIP3	100	38.955	Macaca_nemestrina
ENSEBUG00000001181	poldip3	93	33.333	ENSMAMG00000009151	poldip3	100	37.440	Mastacembelus_armatus
ENSEBUG00000001181	poldip3	82	38.346	ENSMGAG00000011986	POLDIP3	92	38.346	Meleagris_gallopavo
ENSEBUG00000001181	poldip3	90	34.642	ENSMAUG00000014002	Poldip3	96	34.642	Mesocricetus_auratus
ENSEBUG00000001181	poldip3	93	38.626	ENSMICG00000041767	POLDIP3	100	38.588	Microcebus_murinus
ENSEBUG00000001181	poldip3	93	38.756	ENSMOCG00000014101	Poldip3	100	38.702	Microtus_ochrogaster
ENSEBUG00000001181	poldip3	93	38.902	MGP_CAROLIEiJ_G0020093	Poldip3	100	39.379	Mus_caroli
ENSEBUG00000001181	poldip3	93	38.663	ENSMUSG00000041815	Poldip3	100	39.141	Mus_musculus
ENSEBUG00000001181	poldip3	93	39.529	MGP_PahariEiJ_G0020100	Poldip3	100	40.000	Mus_pahari
ENSEBUG00000001181	poldip3	93	38.663	MGP_SPRETEiJ_G0020991	Poldip3	100	39.141	Mus_spretus
ENSEBUG00000001181	poldip3	93	39.062	ENSMPUG00000016314	POLDIP3	100	39.286	Mustela_putorius_furo
ENSEBUG00000001181	poldip3	82	38.035	ENSMLUG00000012408	POLDIP3	88	38.974	Myotis_lucifugus
ENSEBUG00000001181	poldip3	93	38.571	ENSNGAG00000000210	Poldip3	100	39.048	Nannospalax_galili
ENSEBUG00000001181	poldip3	93	31.493	ENSNBRG00000001837	poldip3	100	31.902	Neolamprologus_brichardi
ENSEBUG00000001181	poldip3	93	38.626	ENSNLEG00000015950	POLDIP3	100	38.995	Nomascus_leucogenys
ENSEBUG00000001181	poldip3	93	36.034	ENSMEUG00000013932	POLDIP3	100	36.463	Notamacropus_eugenii
ENSEBUG00000001181	poldip3	93	39.141	ENSODEG00000014224	POLDIP3	100	39.379	Octodon_degus
ENSEBUG00000001181	poldip3	87	34.977	ENSOANG00000011029	POLDIP3	94	35.024	Ornithorhynchus_anatinus
ENSEBUG00000001181	poldip3	93	37.611	ENSOCUG00000016133	POLDIP3	99	37.611	Oryctolagus_cuniculus
ENSEBUG00000001181	poldip3	93	33.172	ENSORLG00015018234	poldip3	100	33.656	Oryzias_latipes_hsok
ENSEBUG00000001181	poldip3	93	37.251	ENSOGAG00000008216	POLDIP3	100	37.892	Otolemur_garnettii
ENSEBUG00000001181	poldip3	93	37.472	ENSOARG00000018993	POLDIP3	100	37.472	Ovis_aries
ENSEBUG00000001181	poldip3	93	38.353	ENSPPAG00000036619	POLDIP3	100	38.551	Pan_paniscus
ENSEBUG00000001181	poldip3	93	38.318	ENSPPRG00000021188	POLDIP3	100	38.876	Panthera_pardus
ENSEBUG00000001181	poldip3	93	38.318	ENSPTIG00000021396	POLDIP3	100	38.876	Panthera_tigris_altaica
ENSEBUG00000001181	poldip3	93	38.353	ENSPTRG00000014460	POLDIP3	100	38.551	Pan_troglodytes
ENSEBUG00000001181	poldip3	93	39.161	ENSPANG00000007026	POLDIP3	100	38.955	Papio_anubis
ENSEBUG00000001181	poldip3	91	32.563	ENSPKIG00000007231	poldip3	94	32.600	Paramormyrops_kingsleyae
ENSEBUG00000001181	poldip3	82	38.500	ENSPSIG00000006347	POLDIP3	92	38.750	Pelodiscus_sinensis
ENSEBUG00000001181	poldip3	93	37.862	ENSPEMG00000021065	Poldip3	100	37.862	Peromyscus_maniculatus_bairdii
ENSEBUG00000001181	poldip3	93	43.468	ENSPMAG00000004894	poldip3	93	43.468	Petromyzon_marinus
ENSEBUG00000001181	poldip3	93	37.955	ENSPCIG00000026194	POLDIP3	100	37.727	Phascolarctos_cinereus
ENSEBUG00000001181	poldip3	93	35.147	ENSPFOG00000000926	poldip3	100	35.601	Poecilia_formosa
ENSEBUG00000001181	poldip3	93	36.298	ENSPLAG00000005558	poldip3	100	38.350	Poecilia_latipinna
ENSEBUG00000001181	poldip3	93	38.031	ENSPPYG00000011899	POLDIP3	100	38.255	Pongo_abelii
ENSEBUG00000001181	poldip3	93	36.739	ENSPCAG00000009424	POLDIP3	100	36.739	Procavia_capensis
ENSEBUG00000001181	poldip3	93	38.626	ENSPCOG00000020271	POLDIP3	100	38.588	Propithecus_coquereli
ENSEBUG00000001181	poldip3	93	38.000	ENSPVAG00000014131	POLDIP3	100	37.500	Pteropus_vampyrus
ENSEBUG00000001181	poldip3	93	32.465	ENSPNAG00000023036	poldip3	100	36.364	Pygocentrus_nattereri
ENSEBUG00000001181	poldip3	93	36.865	ENSRNOG00000022877	Poldip3	100	36.865	Rattus_norvegicus
ENSEBUG00000001181	poldip3	93	38.863	ENSRBIG00000041676	POLDIP3	100	38.955	Rhinopithecus_bieti
ENSEBUG00000001181	poldip3	93	38.863	ENSRROG00000022379	POLDIP3	100	38.955	Rhinopithecus_roxellana
ENSEBUG00000001181	poldip3	93	36.636	ENSSBOG00000025315	-	100	36.636	Saimiri_boliviensis_boliviensis
ENSEBUG00000001181	poldip3	93	38.995	ENSSBOG00000021779	-	100	39.192	Saimiri_boliviensis_boliviensis
ENSEBUG00000001181	poldip3	93	37.472	ENSSHAG00000005316	POLDIP3	98	37.472	Sarcophilus_harrisii
ENSEBUG00000001181	poldip3	82	36.020	ENSSFOG00015012582	poldip3	92	37.433	Scleropages_formosus
ENSEBUG00000001181	poldip3	90	32.773	ENSSFOG00015012429	-	97	33.403	Scleropages_formosus
ENSEBUG00000001181	poldip3	93	35.381	ENSSMAG00000004609	poldip3	100	36.893	Scophthalmus_maximus
ENSEBUG00000001181	poldip3	90	35.682	ENSSARG00000011587	POLDIP3	95	35.550	Sorex_araneus
ENSEBUG00000001181	poldip3	93	36.889	ENSSPUG00000005362	POLDIP3	97	37.086	Sphenodon_punctatus
ENSEBUG00000001181	poldip3	93	38.480	ENSSSCG00000000039	POLDIP3	100	38.679	Sus_scrofa
ENSEBUG00000001181	poldip3	93	37.748	ENSTGUG00000009622	-	98	37.969	Taeniopygia_guttata
ENSEBUG00000001181	poldip3	93	35.664	ENSTRUG00000006604	poldip3	100	36.320	Takifugu_rubripes
ENSEBUG00000001181	poldip3	93	37.832	ENSTNIG00000010841	poldip3	100	35.841	Tetraodon_nigroviridis
ENSEBUG00000001181	poldip3	93	37.389	ENSTBEG00000010978	POLDIP3	100	37.832	Tupaia_belangeri
ENSEBUG00000001181	poldip3	90	37.644	ENSTTRG00000015129	POLDIP3	98	37.071	Tursiops_truncatus
ENSEBUG00000001181	poldip3	93	38.616	ENSUAMG00000026181	POLDIP3	100	38.616	Ursus_americanus
ENSEBUG00000001181	poldip3	87	38.519	ENSUMAG00000020385	POLDIP3	96	38.152	Ursus_maritimus
ENSEBUG00000001181	poldip3	93	40.385	ENSVVUG00000002231	POLDIP3	100	40.385	Vulpes_vulpes
ENSEBUG00000001181	poldip3	95	38.936	ENSXETG00000013412	poldip3	100	39.348	Xenopus_tropicalis