EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000001266 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 113969 bases
Position: chrFYBX02010745.1:741014-854982
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000001526	TROVE	PF05731.11	5.1e-89	1	2
ENSEBUP00000001526	TROVE	PF05731.11	5.1e-89	2	2
ENSEBUP00000001453	TROVE	PF05731.11	1.2e-88	1	2
ENSEBUP00000001453	TROVE	PF05731.11	1.2e-88	2	2
ENSEBUP00000001478	TROVE	PF05731.11	1.2e-88	1	2
ENSEBUP00000001478	TROVE	PF05731.11	1.2e-88	2	2
ENSEBUP00000001501	TROVE	PF05731.11	1.2e-88	1	2
ENSEBUP00000001501	TROVE	PF05731.11	1.2e-88	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000001829	-	3896	-	ENSEBUP00000001501	944 (aa)	-	-
ENSEBUT00000001854	-	2979	-	ENSEBUP00000001526	727 (aa)	-	-
ENSEBUT00000001781	-	3844	-	ENSEBUP00000001453	944 (aa)	-	-
ENSEBUT00000001806	-	3896	-	ENSEBUP00000001478	944 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000001266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000001266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000001266	-	60	40.934	ENSELUG00000003660	-	51	36.667	Esox_lucius
ENSEBUG00000001266	-	73	36.419	ENSGAGG00000008821	-	74	42.029	Gopherus_agassizii
ENSEBUG00000001266	-	53	44.242	ENSKMAG00000018051	-	60	44.242	Kryptolebias_marmoratus
ENSEBUG00000001266	-	70	35.417	ENSLBEG00000005118	-	61	35.364	Labrus_bergylta
ENSEBUG00000001266	-	62	40.838	ENSNBRG00000015750	-	70	36.517	Neolamprologus_brichardi
ENSEBUG00000001266	-	62	43.750	ENSOMEG00000022723	-	58	43.750	Oryzias_melastigma
ENSEBUG00000001266	-	70	34.638	ENSSFOG00015012233	-	69	34.870	Scleropages_formosus
ENSEBUG00000001266	-	58	40.000	ENSSMAG00000010523	-	53	39.730	Scophthalmus_maximus
ENSEBUG00000001266	-	52	48.193	ENSSDUG00000006595	-	52	33.871	Seriola_dumerili