EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000001312 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 19583 bases
Position: chrFYBX02010514.1:1084648-1104230
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000001571	LSM	PF01423.22	9.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000001901	-	369	-	ENSEBUP00000001571	122 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000001312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000001312's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000001312	oscp1a	96	52.991	ENSG00000181817	LSM10	95	52.991	Homo_sapiens
ENSEBUG00000001312	oscp1a	96	52.991	ENSAMEG00000019854	LSM10	95	52.991	Ailuropoda_melanoleuca
ENSEBUG00000001312	oscp1a	92	48.214	ENSACIG00000015420	oscp1a	74	48.214	Amphilophus_citrinellus
ENSEBUG00000001312	oscp1a	82	53.000	ENSAOCG00000015607	LSM10	78	53.000	Amphiprion_ocellaris
ENSEBUG00000001312	oscp1a	93	50.000	ENSAOCG00000015618	LSM10	94	50.000	Amphiprion_ocellaris
ENSEBUG00000001312	oscp1a	93	50.000	ENSAOCG00000014654	-	94	50.000	Amphiprion_ocellaris
ENSEBUG00000001312	oscp1a	93	50.000	ENSAPEG00000021845	-	94	50.000	Amphiprion_percula
ENSEBUG00000001312	oscp1a	82	53.000	ENSAPEG00000021851	LSM10	78	53.000	Amphiprion_percula
ENSEBUG00000001312	oscp1a	91	45.946	ENSATEG00000006310	oscp1a	82	45.946	Anabas_testudineus
ENSEBUG00000001312	oscp1a	93	58.772	ENSACAG00000001231	LSM10	93	58.772	Anolis_carolinensis
ENSEBUG00000001312	oscp1a	97	51.695	ENSANAG00000031489	-	93	51.695	Aotus_nancymaae
ENSEBUG00000001312	oscp1a	96	52.991	ENSANAG00000018759	-	95	52.991	Aotus_nancymaae
ENSEBUG00000001312	oscp1a	92	51.786	ENSACLG00000004728	oscp1a	91	51.786	Astatotilapia_calliptera
ENSEBUG00000001312	oscp1a	100	50.820	ENSAMXG00000025301	oscp1a	100	50.820	Astyanax_mexicanus
ENSEBUG00000001312	oscp1a	92	52.679	ENSBTAG00000024096	LSM10	92	52.679	Bos_taurus
ENSEBUG00000001312	oscp1a	96	52.991	ENSCJAG00000044880	LSM10	95	52.991	Callithrix_jacchus
ENSEBUG00000001312	oscp1a	96	52.137	ENSCAFG00000003382	LSM10	95	52.137	Canis_familiaris
ENSEBUG00000001312	oscp1a	96	52.137	ENSCAFG00020008920	LSM10	95	52.137	Canis_lupus_dingo
ENSEBUG00000001312	oscp1a	92	52.679	ENSCHIG00000009398	LSM10	92	52.679	Capra_hircus
ENSEBUG00000001312	oscp1a	96	52.137	ENSCAPG00000012567	LSM10	95	52.137	Cavia_aperea
ENSEBUG00000001312	oscp1a	96	52.137	ENSCPOG00000039302	LSM10	95	52.137	Cavia_porcellus
ENSEBUG00000001312	oscp1a	84	54.902	ENSCCAG00000008378	-	83	54.902	Cebus_capucinus
ENSEBUG00000001312	oscp1a	96	52.991	ENSCCAG00000018913	-	95	52.991	Cebus_capucinus
ENSEBUG00000001312	oscp1a	96	52.991	ENSCATG00000006589	LSM10	95	52.991	Cercocebus_atys
ENSEBUG00000001312	oscp1a	96	52.991	ENSCLAG00000008633	LSM10	95	52.991	Chinchilla_lanigera
ENSEBUG00000001312	oscp1a	96	52.991	ENSCSAG00000000134	LSM10	95	52.991	Chlorocebus_sabaeus
ENSEBUG00000001312	oscp1a	99	51.613	ENSCHOG00000008615	LSM10	98	51.613	Choloepus_hoffmanni
ENSEBUG00000001312	oscp1a	74	36.667	ENSCSAVG00000001896	-	77	36.667	Ciona_savignyi
ENSEBUG00000001312	oscp1a	96	52.991	ENSCANG00000019928	LSM10	95	52.991	Colobus_angolensis_palliatus
ENSEBUG00000001312	oscp1a	84	50.476	ENSCGRG00001022673	-	85	50.476	Cricetulus_griseus_chok1gshd
ENSEBUG00000001312	oscp1a	96	52.991	ENSCGRG00001004317	-	96	52.991	Cricetulus_griseus_chok1gshd
ENSEBUG00000001312	oscp1a	84	50.476	ENSCGRG00000015514	-	85	50.476	Cricetulus_griseus_crigri
ENSEBUG00000001312	oscp1a	96	52.991	ENSCGRG00000014935	-	96	52.991	Cricetulus_griseus_crigri
ENSEBUG00000001312	oscp1a	93	48.246	ENSCSEG00000010374	oscp1a	77	48.246	Cynoglossus_semilaevis
ENSEBUG00000001312	oscp1a	92	48.214	ENSCVAG00000001536	oscp1a	84	48.214	Cyprinodon_variegatus
ENSEBUG00000001312	oscp1a	66	56.250	ENSDARG00000109563	CABZ01074453.1	93	56.250	Danio_rerio
ENSEBUG00000001312	oscp1a	92	52.679	ENSDARG00000101222	oscp1a	93	52.679	Danio_rerio
ENSEBUG00000001312	oscp1a	96	52.137	ENSDNOG00000036662	LSM10	95	52.137	Dasypus_novemcinctus
ENSEBUG00000001312	oscp1a	96	52.991	ENSDORG00000007579	Lsm10	95	52.991	Dipodomys_ordii
ENSEBUG00000001312	oscp1a	95	31.034	FBgn0033554	Lsm10	82	31.034	Drosophila_melanogaster
ENSEBUG00000001312	oscp1a	96	53.846	ENSETEG00000005703	LSM10	95	53.846	Echinops_telfairi
ENSEBUG00000001312	oscp1a	96	52.137	ENSEASG00005012194	LSM10	95	52.137	Equus_asinus_asinus
ENSEBUG00000001312	oscp1a	96	52.137	ENSECAG00000005071	LSM10	95	52.137	Equus_caballus
ENSEBUG00000001312	oscp1a	96	51.282	ENSEEUG00000012032	LSM10	95	51.282	Erinaceus_europaeus
ENSEBUG00000001312	oscp1a	93	50.442	ENSELUG00000007452	oscp1a	93	50.442	Esox_lucius
ENSEBUG00000001312	oscp1a	95	52.586	ENSFALG00000000851	LSM10	94	52.586	Ficedula_albicollis
ENSEBUG00000001312	oscp1a	96	52.991	ENSFDAG00000021056	LSM10	95	52.991	Fukomys_damarensis
ENSEBUG00000001312	oscp1a	89	52.294	ENSFHEG00000001058	oscp1a	94	52.294	Fundulus_heteroclitus
ENSEBUG00000001312	oscp1a	91	50.450	ENSGMOG00000019832	oscp1a	93	50.450	Gadus_morhua
ENSEBUG00000001312	oscp1a	92	53.571	ENSGALG00000002127	LSM10	91	53.571	Gallus_gallus
ENSEBUG00000001312	oscp1a	84	51.456	ENSGAFG00000016445	oscp1a	84	51.456	Gambusia_affinis
ENSEBUG00000001312	oscp1a	92	51.786	ENSGACG00000002329	oscp1a	92	51.786	Gasterosteus_aculeatus
ENSEBUG00000001312	oscp1a	95	50.000	ENSGAGG00000024848	LSM10	94	50.000	Gopherus_agassizii
ENSEBUG00000001312	oscp1a	96	52.991	ENSGGOG00000003556	LSM10	95	52.991	Gorilla_gorilla
ENSEBUG00000001312	oscp1a	92	50.893	ENSHBUG00000001722	oscp1a	91	50.893	Haplochromis_burtoni
ENSEBUG00000001312	oscp1a	96	51.282	ENSHGLG00000011625	LSM10	95	51.282	Heterocephalus_glaber_female
ENSEBUG00000001312	oscp1a	96	51.282	ENSHGLG00100001769	LSM10	95	51.282	Heterocephalus_glaber_male
ENSEBUG00000001312	oscp1a	80	60.204	ENSIPUG00000005808	oscp1a	85	60.204	Ictalurus_punctatus
ENSEBUG00000001312	oscp1a	96	52.137	ENSSTOG00000000606	LSM10	95	52.137	Ictidomys_tridecemlineatus
ENSEBUG00000001312	oscp1a	92	50.893	ENSKMAG00000012143	oscp1a	93	50.893	Kryptolebias_marmoratus
ENSEBUG00000001312	oscp1a	96	53.846	ENSLBEG00000017764	oscp1a	96	53.846	Labrus_bergylta
ENSEBUG00000001312	oscp1a	99	49.587	ENSLACG00000015904	LSM10	93	49.587	Latimeria_chalumnae
ENSEBUG00000001312	oscp1a	97	56.780	ENSLOCG00000018277	oscp1a	97	56.780	Lepisosteus_oculatus
ENSEBUG00000001312	oscp1a	96	53.782	ENSLAFG00000009600	LSM10	95	53.782	Loxodonta_africana
ENSEBUG00000001312	oscp1a	96	52.991	ENSMFAG00000009115	LSM10	95	52.991	Macaca_fascicularis
ENSEBUG00000001312	oscp1a	96	52.991	ENSMMUG00000017338	LSM10	95	52.991	Macaca_mulatta
ENSEBUG00000001312	oscp1a	96	52.991	ENSMNEG00000020023	LSM10	95	52.991	Macaca_nemestrina
ENSEBUG00000001312	oscp1a	96	52.991	ENSMLEG00000025150	LSM10	95	52.991	Mandrillus_leucophaeus
ENSEBUG00000001312	oscp1a	96	48.718	ENSMAMG00000004427	oscp1a	96	48.718	Mastacembelus_armatus
ENSEBUG00000001312	oscp1a	92	51.786	ENSMZEG00005026307	oscp1a	91	51.786	Maylandia_zebra
ENSEBUG00000001312	oscp1a	92	54.464	ENSMGAG00000015707	LSM10	91	54.464	Meleagris_gallopavo
ENSEBUG00000001312	oscp1a	99	53.719	ENSMAUG00000016624	Lsm10	99	53.719	Mesocricetus_auratus
ENSEBUG00000001312	oscp1a	100	51.639	ENSMOCG00000021943	Lsm10	100	51.639	Microtus_ochrogaster
ENSEBUG00000001312	oscp1a	93	51.327	ENSMMOG00000013597	oscp1a	84	51.327	Mola_mola
ENSEBUG00000001312	oscp1a	92	52.679	ENSMODG00000023328	LSM10	91	52.679	Monodelphis_domestica
ENSEBUG00000001312	oscp1a	100	48.361	MGP_CAROLIEiJ_G0026467	Lsm10	98	56.044	Mus_caroli
ENSEBUG00000001312	oscp1a	100	48.361	ENSMUSG00000050188	Lsm10	98	56.044	Mus_musculus
ENSEBUG00000001312	oscp1a	100	48.361	MGP_PahariEiJ_G0028798	Lsm10	98	56.044	Mus_pahari
ENSEBUG00000001312	oscp1a	100	48.361	MGP_SPRETEiJ_G0027446	Lsm10	98	56.044	Mus_spretus
ENSEBUG00000001312	oscp1a	96	52.137	ENSMPUG00000018593	LSM10	95	52.137	Mustela_putorius_furo
ENSEBUG00000001312	oscp1a	96	52.991	ENSMLUG00000023895	LSM10	95	52.991	Myotis_lucifugus
ENSEBUG00000001312	oscp1a	100	50.820	ENSNGAG00000015011	Lsm10	99	50.820	Nannospalax_galili
ENSEBUG00000001312	oscp1a	92	50.000	ENSNBRG00000014306	oscp1a	91	50.000	Neolamprologus_brichardi
ENSEBUG00000001312	oscp1a	96	52.991	ENSNLEG00000033754	LSM10	95	52.991	Nomascus_leucogenys
ENSEBUG00000001312	oscp1a	92	52.679	ENSMEUG00000006313	LSM10	91	52.679	Notamacropus_eugenii
ENSEBUG00000001312	oscp1a	99	52.066	ENSOPRG00000001699	LSM10	98	52.066	Ochotona_princeps
ENSEBUG00000001312	oscp1a	96	52.991	ENSODEG00000019161	LSM10	95	52.991	Octodon_degus
ENSEBUG00000001312	oscp1a	92	50.000	ENSONIG00000020904	oscp1a	92	50.000	Oreochromis_niloticus
ENSEBUG00000001312	oscp1a	92	54.464	ENSOANG00000002066	LSM10	91	54.464	Ornithorhynchus_anatinus
ENSEBUG00000001312	oscp1a	99	51.240	ENSOCUG00000005333	LSM10	98	51.240	Oryctolagus_cuniculus
ENSEBUG00000001312	oscp1a	96	49.573	ENSORLG00000009504	oscp1a	97	49.573	Oryzias_latipes
ENSEBUG00000001312	oscp1a	96	49.573	ENSORLG00020016201	oscp1a	97	49.573	Oryzias_latipes_hni
ENSEBUG00000001312	oscp1a	96	51.282	ENSORLG00015007794	oscp1a	97	51.282	Oryzias_latipes_hsok
ENSEBUG00000001312	oscp1a	96	52.991	ENSOGAG00000002653	LSM10	95	52.991	Otolemur_garnettii
ENSEBUG00000001312	oscp1a	92	52.679	ENSOARG00000009596	LSM10	92	52.679	Ovis_aries
ENSEBUG00000001312	oscp1a	96	52.991	ENSPPAG00000023465	LSM10	95	52.991	Pan_paniscus
ENSEBUG00000001312	oscp1a	96	52.991	ENSPPRG00000014619	LSM10	95	52.991	Panthera_pardus
ENSEBUG00000001312	oscp1a	96	52.991	ENSPTIG00000004613	LSM10	95	52.991	Panthera_tigris_altaica
ENSEBUG00000001312	oscp1a	96	52.991	ENSPTRG00000000539	LSM10	95	52.991	Pan_troglodytes
ENSEBUG00000001312	oscp1a	96	52.991	ENSPANG00000023172	LSM10	95	52.991	Papio_anubis
ENSEBUG00000001312	oscp1a	96	51.282	ENSPKIG00000003728	oscp1a	94	51.282	Paramormyrops_kingsleyae
ENSEBUG00000001312	oscp1a	95	49.138	ENSPSIG00000000590	LSM10	94	49.138	Pelodiscus_sinensis
ENSEBUG00000001312	oscp1a	60	50.685	ENSPMGG00000015718	oscp1a	95	50.685	Periophthalmus_magnuspinnatus
ENSEBUG00000001312	oscp1a	80	56.701	ENSPCIG00000014865	LSM10	71	56.701	Phascolarctos_cinereus
ENSEBUG00000001312	oscp1a	92	53.571	ENSPFOG00000020490	oscp1a	95	53.571	Poecilia_formosa
ENSEBUG00000001312	oscp1a	92	53.571	ENSPLAG00000016537	oscp1a	85	53.571	Poecilia_latipinna
ENSEBUG00000001312	oscp1a	90	50.909	ENSPMEG00000000174	oscp1a	96	50.909	Poecilia_mexicana
ENSEBUG00000001312	oscp1a	92	51.786	ENSPREG00000009899	oscp1a	85	51.786	Poecilia_reticulata
ENSEBUG00000001312	oscp1a	96	52.991	ENSPPYG00000001539	LSM10	95	52.991	Pongo_abelii
ENSEBUG00000001312	oscp1a	96	53.782	ENSPCAG00000002520	LSM10	96	53.782	Procavia_capensis
ENSEBUG00000001312	oscp1a	96	52.137	ENSPVAG00000008644	LSM10	95	52.137	Pteropus_vampyrus
ENSEBUG00000001312	oscp1a	92	50.893	ENSPNYG00000003138	oscp1a	91	50.893	Pundamilia_nyererei
ENSEBUG00000001312	oscp1a	98	50.420	ENSPNAG00000028829	oscp1a	98	50.420	Pygocentrus_nattereri
ENSEBUG00000001312	oscp1a	100	49.180	ENSRNOG00000025716	Lsm10	100	49.180	Rattus_norvegicus
ENSEBUG00000001312	oscp1a	96	52.991	ENSRBIG00000001561	LSM10	95	52.991	Rhinopithecus_bieti
ENSEBUG00000001312	oscp1a	96	52.991	ENSRROG00000011414	LSM10	95	52.991	Rhinopithecus_roxellana
ENSEBUG00000001312	oscp1a	96	52.991	ENSSBOG00000036413	-	95	52.991	Saimiri_boliviensis_boliviensis
ENSEBUG00000001312	oscp1a	92	51.786	ENSSHAG00000018056	LSM10	91	51.786	Sarcophilus_harrisii
ENSEBUG00000001312	oscp1a	96	48.718	ENSSFOG00015019954	lsm10	96	48.718	Scleropages_formosus
ENSEBUG00000001312	oscp1a	92	50.893	ENSSMAG00000001297	oscp1a	96	50.893	Scophthalmus_maximus
ENSEBUG00000001312	oscp1a	94	49.565	ENSSDUG00000007090	oscp1a	93	49.565	Seriola_dumerili
ENSEBUG00000001312	oscp1a	93	49.123	ENSSLDG00000000800	oscp1a	94	49.123	Seriola_lalandi_dorsalis
ENSEBUG00000001312	oscp1a	86	55.238	ENSSARG00000004211	LSM10	84	55.238	Sorex_araneus
ENSEBUG00000001312	oscp1a	92	50.000	ENSSPAG00000009229	oscp1a	93	50.000	Stegastes_partitus
ENSEBUG00000001312	oscp1a	86	55.238	ENSSSCG00000038916	LSM10	87	55.238	Sus_scrofa
ENSEBUG00000001312	oscp1a	95	52.586	ENSTGUG00000001602	-	95	52.586	Taeniopygia_guttata
ENSEBUG00000001312	oscp1a	95	52.586	ENSTGUG00000001600	-	95	52.586	Taeniopygia_guttata
ENSEBUG00000001312	oscp1a	93	51.754	ENSTRUG00000010531	oscp1a	92	51.754	Takifugu_rubripes
ENSEBUG00000001312	oscp1a	96	52.137	ENSTBEG00000016674	LSM10	95	52.137	Tupaia_belangeri
ENSEBUG00000001312	oscp1a	96	52.137	ENSUAMG00000020265	LSM10	95	52.137	Ursus_americanus
ENSEBUG00000001312	oscp1a	96	52.137	ENSUMAG00000001438	LSM10	54	52.137	Ursus_maritimus
ENSEBUG00000001312	oscp1a	96	52.137	ENSVVUG00000023209	LSM10	95	52.137	Vulpes_vulpes
ENSEBUG00000001312	oscp1a	82	54.000	ENSXETG00000027631	lsm10	83	54.000	Xenopus_tropicalis
ENSEBUG00000001312	oscp1a	92	53.571	ENSXCOG00000018776	oscp1a	70	53.571	Xiphophorus_couchianus
ENSEBUG00000001312	oscp1a	94	54.783	ENSXMAG00000019963	oscp1a	90	54.783	Xiphophorus_maculatus