EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000001547 (Gene tree)
Gene ID: -
Gene Symbol: surf6
Alias: surf6l|zgc:64008
Full Name: surfeit 6
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 5739 bases
Position: chrFYBX02010384.1:1527687-1533425
Accession: ZDB-GENE-040426-1333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000001925	SURF6	PF04935.12	1.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000002268	-	1017	-	ENSEBUP00000001925	338 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000001547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000001547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000001547	surf6	53	42.222	ENSBTAG00000011554	SURF6	50	42.222	Bos_taurus
ENSEBUG00000001547	surf6	58	42.347	ENSCAPG00000010696	SURF6	61	40.976	Cavia_aperea
ENSEBUG00000001547	surf6	50	44.970	ENSCPOG00000030454	SURF6	56	40.976	Cavia_porcellus
ENSEBUG00000001547	surf6	50	44.379	ENSCCAG00000025688	SURF6	73	44.379	Cebus_capucinus
ENSEBUG00000001547	surf6	62	42.105	ENSDARG00000035427	surf6	53	42.105	Danio_rerio
ENSEBUG00000001547	surf6	50	42.604	ENSETEG00000004239	SURF6	52	45.562	Echinops_telfairi
ENSEBUG00000001547	surf6	50	42.353	ENSEEUG00000011071	-	60	42.353	Erinaceus_europaeus
ENSEBUG00000001547	surf6	50	42.353	ENSEEUG00000001732	-	76	42.353	Erinaceus_europaeus
ENSEBUG00000001547	surf6	51	47.802	ENSGAFG00000013618	surf6	52	47.802	Gambusia_affinis
ENSEBUG00000001547	surf6	60	41.089	ENSIPUG00000008066	surf6	55	41.089	Ictalurus_punctatus
ENSEBUG00000001547	surf6	50	44.706	ENSJJAG00000016287	Surf6	52	42.708	Jaculus_jaculus
ENSEBUG00000001547	surf6	50	46.154	ENSOPRG00000000430	-	74	46.154	Ochotona_princeps
ENSEBUG00000001547	surf6	56	40.104	ENSODEG00000015789	SURF6	57	38.164	Octodon_degus
ENSEBUG00000001547	surf6	50	46.154	ENSPPAG00000032305	SURF6	56	40.777	Pan_paniscus
ENSEBUG00000001547	surf6	50	46.154	ENSPTRG00000021514	SURF6	61	40.476	Pan_troglodytes
ENSEBUG00000001547	surf6	76	43.969	ENSPMGG00000004798	surf6	68	47.573	Periophthalmus_magnuspinnatus
ENSEBUG00000001547	surf6	51	46.703	ENSPLAG00000021874	surf6	52	46.703	Poecilia_latipinna
ENSEBUG00000001547	surf6	51	46.703	ENSPMEG00000009276	surf6	52	46.703	Poecilia_mexicana
ENSEBUG00000001547	surf6	51	46.703	ENSPMEG00000009994	surf6	53	46.703	Poecilia_mexicana
ENSEBUG00000001547	surf6	51	47.253	ENSPREG00000021969	surf6	59	47.253	Poecilia_reticulata
ENSEBUG00000001547	surf6	57	51.020	ENSSFOG00015016640	surf6	51	51.020	Scleropages_formosus
ENSEBUG00000001547	surf6	51	48.352	ENSXCOG00000001322	surf6	53	48.352	Xiphophorus_couchianus
ENSEBUG00000001547	surf6	51	48.352	ENSXMAG00000024608	surf6	53	48.352	Xiphophorus_maculatus