EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000001681 (Gene tree)
Gene ID: -
Gene Symbol: srsf4 (1 of many)
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 6193 bases
Position: chrFYBX02009603.1:509549-515741
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000002164	RRM_1	PF00076.22	3.8e-26	1	2
ENSEBUP00000002164	RRM_1	PF00076.22	3.8e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000002511	-	801	-	ENSEBUP00000002164	266 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000001681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000001681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000001681	srsf4	60	54.088	ENSEBUG00000003129	srsf4	68	53.049
ENSEBUG00000001681	srsf4	67	50.549	ENSEBUG00000006229	srsf5b	90	40.299
ENSEBUG00000001681	srsf4	62	35.294	ENSEBUG00000009582	-	87	33.945
ENSEBUG00000001681	srsf4	54	31.469	ENSEBUG00000001322	-	52	32.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000001681	srsf4	67	64.246	ENSG00000116350	SRSF4	60	74.074	Homo_sapiens
ENSEBUG00000001681	srsf4	67	61.111	ENSAPOG00000023399	-	72	55.607	Acanthochromis_polyacanthus
ENSEBUG00000001681	srsf4	67	60.894	ENSACIG00000018649	srsf4	92	60.317	Amphilophus_citrinellus
ENSEBUG00000001681	srsf4	64	57.396	ENSAOCG00000005997	srsf4	94	57.988	Amphiprion_ocellaris
ENSEBUG00000001681	srsf4	66	60.674	ENSATEG00000005680	srsf4	59	61.798	Anabas_testudineus
ENSEBUG00000001681	srsf4	67	60.894	ENSACLG00000003395	srsf4	77	60.215	Astatotilapia_calliptera
ENSEBUG00000001681	srsf4	67	62.983	ENSACLG00000021269	-	53	57.619	Astatotilapia_calliptera
ENSEBUG00000001681	srsf4	67	59.218	ENSAMXG00000034811	srsf4	81	63.529	Astyanax_mexicanus
ENSEBUG00000001681	srsf4	66	40.000	WBGene00004698	rsp-1	97	40.000	Caenorhabditis_elegans
ENSEBUG00000001681	srsf4	67	63.128	ENSCHIG00000022096	SRSF4	53	56.221	Capra_hircus
ENSEBUG00000001681	srsf4	67	48.168	ENSCING00000020631	-	90	47.511	Ciona_intestinalis
ENSEBUG00000001681	srsf4	66	46.269	ENSCING00000024718	-	67	45.259	Ciona_intestinalis
ENSEBUG00000001681	srsf4	67	53.769	ENSCING00000012370	-	69	53.922	Ciona_intestinalis
ENSEBUG00000001681	srsf4	65	47.514	ENSCING00000011362	-	64	47.514	Ciona_intestinalis
ENSEBUG00000001681	srsf4	66	56.250	ENSCSAVG00000002581	-	88	48.498	Ciona_savignyi
ENSEBUG00000001681	srsf4	67	59.239	ENSCSEG00000010058	srsf4	75	58.871	Cynoglossus_semilaevis
ENSEBUG00000001681	srsf4	67	59.218	ENSDARG00000105293	srsf4	80	65.517	Danio_rerio
ENSEBUG00000001681	srsf4	66	53.846	FBgn0004587	B52	94	51.515	Drosophila_melanogaster
ENSEBUG00000001681	srsf4	67	54.974	ENSELUG00000017551	srsf4	95	52.273	Esox_lucius
ENSEBUG00000001681	srsf4	67	59.777	ENSFHEG00000007472	srsf4	91	67.059	Fundulus_heteroclitus
ENSEBUG00000001681	srsf4	67	59.777	ENSGMOG00000012906	srsf4	61	56.853	Gadus_morhua
ENSEBUG00000001681	srsf4	67	61.111	ENSGAFG00000018496	srsf4	71	53.266	Gambusia_affinis
ENSEBUG00000001681	srsf4	67	61.453	ENSGACG00000002389	srsf4	55	61.453	Gasterosteus_aculeatus
ENSEBUG00000001681	srsf4	67	62.983	ENSHBUG00000011326	-	54	57.619	Haplochromis_burtoni
ENSEBUG00000001681	srsf4	67	60.989	ENSHCOG00000012540	srsf4	67	60.541	Hippocampus_comes
ENSEBUG00000001681	srsf4	67	62.983	ENSKMAG00000013631	srsf4	90	51.064	Kryptolebias_marmoratus
ENSEBUG00000001681	srsf4	67	60.221	ENSLOCG00000001442	-	59	55.310	Lepisosteus_oculatus
ENSEBUG00000001681	srsf4	67	63.128	ENSMMUG00000007110	SRSF4	51	60.406	Macaca_mulatta
ENSEBUG00000001681	srsf4	67	62.778	ENSMAMG00000004888	srsf4	70	62.097	Mastacembelus_armatus
ENSEBUG00000001681	srsf4	67	60.894	ENSMZEG00005026275	srsf4	77	60.215	Maylandia_zebra
ENSEBUG00000001681	srsf4	67	59.444	ENSMMOG00000013653	srsf4	69	54.774	Mola_mola
ENSEBUG00000001681	srsf4	67	64.804	ENSMODG00000011052	SRSF4	60	60.914	Monodelphis_domestica
ENSEBUG00000001681	srsf4	67	60.894	ENSMALG00000013392	srsf4	66	60.894	Monopterus_albus
ENSEBUG00000001681	srsf4	67	58.011	ENSNLEG00000030787	-	75	52.752	Nomascus_leucogenys
ENSEBUG00000001681	srsf4	67	60.335	ENSORLG00020016052	srsf4	65	61.111	Oryzias_latipes_hni
ENSEBUG00000001681	srsf4	67	60.335	ENSORLG00015007566	srsf4	77	58.081	Oryzias_latipes_hsok
ENSEBUG00000001681	srsf4	67	60.335	ENSOMEG00000005541	srsf4	50	61.111	Oryzias_melastigma
ENSEBUG00000001681	srsf4	54	62.937	ENSOARG00000002451	SRSF4	51	58.385	Ovis_aries
ENSEBUG00000001681	srsf4	67	57.754	ENSPMGG00000013436	srsf4	96	60.465	Periophthalmus_magnuspinnatus
ENSEBUG00000001681	srsf4	67	55.249	ENSPMAG00000009397	srsf4	82	50.000	Petromyzon_marinus
ENSEBUG00000001681	srsf4	67	61.111	ENSPLAG00000008812	srsf4	70	51.515	Poecilia_latipinna
ENSEBUG00000001681	srsf4	67	60.556	ENSPMEG00000023638	srsf4	52	60.556	Poecilia_mexicana
ENSEBUG00000001681	srsf4	67	61.111	ENSPREG00000009639	srsf4	57	56.250	Poecilia_reticulata
ENSEBUG00000001681	srsf4	67	60.894	ENSPNYG00000003796	srsf4	55	61.667	Pundamilia_nyererei
ENSEBUG00000001681	srsf4	67	59.551	ENSPNAG00000023844	srsf4	53	59.777	Pygocentrus_nattereri
ENSEBUG00000001681	srsf4	54	62.238	ENSSHAG00000012407	SRSF4	54	59.006	Sarcophilus_harrisii
ENSEBUG00000001681	srsf4	67	59.218	ENSSFOG00015020292	srsf4	97	55.714	Scleropages_formosus
ENSEBUG00000001681	srsf4	67	60.773	ENSSMAG00000001707	srsf4	50	62.983	Scophthalmus_maximus
ENSEBUG00000001681	srsf4	67	60.894	ENSSDUG00000007387	srsf4	53	62.011	Seriola_dumerili
ENSEBUG00000001681	srsf4	67	52.778	ENSSLDG00000009745	srsf4	60	52.778	Seriola_lalandi_dorsalis
ENSEBUG00000001681	srsf4	67	60.894	ENSSPAG00000014538	srsf4	92	55.474	Stegastes_partitus
ENSEBUG00000001681	srsf4	67	60.335	ENSTRUG00000011891	srsf4	62	58.947	Takifugu_rubripes
ENSEBUG00000001681	srsf4	75	59.000	ENSTNIG00000000115	-	50	59.000	Tetraodon_nigroviridis
ENSEBUG00000001681	srsf4	67	60.556	ENSXCOG00000018826	srsf4	89	59.322	Xiphophorus_couchianus
ENSEBUG00000001681	srsf4	67	59.358	ENSXCOG00000003212	-	63	57.674	Xiphophorus_couchianus