EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000002129 (Gene tree)
Gene ID
-
Gene Symbol
RBFOX3 (1 of many)
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Minus strand
Length
276734 bases
Position
chrFYBX02009691.1:984809-1261542
Accession
27097
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000002843Fox-1_CPF12414.87.7e-4211
ENSEBUP00000002871Fox-1_CPF12414.87.8e-4211
ENSEBUP00000002823Fox-1_CPF12414.83.3e-4111
ENSEBUP00000002886Fox-1_CPF12414.81.2e-3711
ENSEBUP00000002886RRM_1PF00076.225.2e-1911
ENSEBUP00000002871RRM_1PF00076.226.1e-1911
ENSEBUP00000002843RRM_1PF00076.226.3e-1911
ENSEBUP00000002823RRM_1PF00076.227e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000003233RBFOX3 (1 of many)-2032127-ENSEBUP00000002871352 (aa)--
ENSEBUT00000003185RBFOX3 (1 of many)-2011996-ENSEBUP00000002823380 (aa)--
ENSEBUT00000003205RBFOX3 (1 of many)-2022136-ENSEBUP00000002843355 (aa)--
ENSEBUT00000003248RBFOX3 (1 of many)-2042018-ENSEBUP00000002886340 (aa)--
Gene Model
Click here to download ENSEBUG00000002129's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002129's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000002129RBFOX38260.900ENSEBUG00000013559RBFOX38857.188
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000002129RBFOX38871.885ENSG00000167281RBFOX39974.815Homo_sapiens
ENSEBUG00000002129RBFOX39755.769ENSAPOG00000015658-8456.851Acanthochromis_polyacanthus
ENSEBUG00000002129RBFOX39969.972ENSAPOG00000021630rbfox3b9765.455Acanthochromis_polyacanthus
ENSEBUG00000002129RBFOX39962.095ENSAMEG00000014170RBFOX39861.845Ailuropoda_melanoleuca
ENSEBUG00000002129RBFOX39060.947ENSACIG00000003768-7965.845Amphilophus_citrinellus
ENSEBUG00000002129RBFOX39366.465ENSACIG00000010817rbfox3b10064.048Amphilophus_citrinellus
ENSEBUG00000002129RBFOX39665.988ENSAOCG00000010786-9561.867Amphiprion_ocellaris
ENSEBUG00000002129RBFOX39569.027ENSAOCG00000012358rbfox3b9764.420Amphiprion_ocellaris
ENSEBUG00000002129RBFOX39859.635ENSAPEG00000015891-9457.468Amphiprion_percula
ENSEBUG00000002129RBFOX39661.449ENSAPEG00000019081rbfox3b9756.952Amphiprion_percula
ENSEBUG00000002129RBFOX38967.089ENSATEG00000023101-9764.955Anabas_testudineus
ENSEBUG00000002129RBFOX39362.604ENSATEG00000019945rbfox3b10062.327Anabas_testudineus
ENSEBUG00000002129RBFOX39669.591ENSACAG00000016093RBFOX39170.000Anolis_carolinensis
ENSEBUG00000002129RBFOX38871.246ENSANAG00000023457RBFOX310070.427Aotus_nancymaae
ENSEBUG00000002129RBFOX39969.209ENSACLG00000020011rbfox3b10069.512Astatotilapia_calliptera
ENSEBUG00000002129RBFOX39567.836ENSACLG00000025552-9763.807Astatotilapia_calliptera
ENSEBUG00000002129RBFOX39667.341ENSAMXG00000037246rbfox3a9966.476Astyanax_mexicanus
ENSEBUG00000002129RBFOX39566.176ENSAMXG00000042841rbfox3b9364.516Astyanax_mexicanus
ENSEBUG00000002129RBFOX37475.197ENSBTAG00000006280RBFOX310054.667Bos_taurus
ENSEBUG00000002129RBFOX38866.879ENSCJAG00000009563RBFOX310061.497Callithrix_jacchus
ENSEBUG00000002129RBFOX37276.471ENSCAFG00000005547RBFOX310069.831Canis_familiaris
ENSEBUG00000002129RBFOX39261.765ENSCAFG00020008126RBFOX310062.725Canis_lupus_dingo
ENSEBUG00000002129RBFOX39261.765ENSCHIG00000009124RBFOX310062.725Capra_hircus
ENSEBUG00000002129RBFOX38862.117ENSTSYG00000029617RBFOX310062.299Carlito_syrichta
ENSEBUG00000002129RBFOX39263.636ENSCPOG00000021703RBFOX310064.781Cavia_porcellus
ENSEBUG00000002129RBFOX38871.246ENSCCAG00000028450RBFOX310070.427Cebus_capucinus
ENSEBUG00000002129RBFOX38871.885ENSCATG00000018349RBFOX310071.037Cercocebus_atys
ENSEBUG00000002129RBFOX39263.102ENSCLAG00000006449RBFOX310062.982Chinchilla_lanigera
ENSEBUG00000002129RBFOX38871.885ENSCSAG00000002355RBFOX310071.037Chlorocebus_sabaeus
ENSEBUG00000002129RBFOX39970.787ENSCPBG00000010904RBFOX310071.429Chrysemys_picta_bellii
ENSEBUG00000002129RBFOX38871.885ENSCANG00000043120RBFOX310071.037Colobus_angolensis_palliatus
ENSEBUG00000002129RBFOX39263.032ENSCGRG00001019476Rbfox310062.916Cricetulus_griseus_chok1gshd
ENSEBUG00000002129RBFOX39263.032ENSCGRG00000003268Rbfox310062.916Cricetulus_griseus_crigri
ENSEBUG00000002129RBFOX39964.865ENSCSEG00000015567RBFOX39663.784Cynoglossus_semilaevis
ENSEBUG00000002129RBFOX39956.425ENSCSEG00000020606RBFOX39654.545Cynoglossus_semilaevis
ENSEBUG00000002129RBFOX39569.027ENSCVAG00000006882rbfox3b8868.142Cyprinodon_variegatus
ENSEBUG00000002129RBFOX39959.322ENSDARG00000074310rbfox3b9764.078Danio_rerio
ENSEBUG00000002129RBFOX39567.638ENSDARG00000010083rbfox3a9967.733Danio_rerio
ENSEBUG00000002129RBFOX37959.756ENSDNOG00000039391RBFOX38069.231Dasypus_novemcinctus
ENSEBUG00000002129RBFOX39255.764ENSDORG00000005352Rbfox310055.928Dipodomys_ordii
ENSEBUG00000002129RBFOX38873.482ENSEASG00005005059RBFOX310070.732Equus_asinus_asinus
ENSEBUG00000002129RBFOX38873.163ENSECAG00000023811RBFOX310070.732Equus_caballus
ENSEBUG00000002129RBFOX38370.652ENSEEUG00000013974RBFOX37670.886Erinaceus_europaeus
ENSEBUG00000002129RBFOX35363.687ENSELUG00000009807-7450.800Esox_lucius
ENSEBUG00000002129RBFOX310069.101ENSELUG00000017963rbfox3b10061.404Esox_lucius
ENSEBUG00000002129RBFOX39669.006ENSFCAG00000002555RBFOX310070.760Felis_catus
ENSEBUG00000002129RBFOX39954.369ENSFALG00000012288RBFOX39854.126Ficedula_albicollis
ENSEBUG00000002129RBFOX39259.091ENSFDAG00000007489RBFOX310060.411Fukomys_damarensis
ENSEBUG00000002129RBFOX39261.585ENSFHEG00000008550rbfox3b10060.671Fundulus_heteroclitus
ENSEBUG00000002129RBFOX38361.850ENSGMOG00000019304-10055.641Gadus_morhua
ENSEBUG00000002129RBFOX39670.381ENSGALG00000032889RBFOX39170.501Gallus_gallus
ENSEBUG00000002129RBFOX39664.431ENSGAFG00000005025rbfox3b8768.987Gambusia_affinis
ENSEBUG00000002129RBFOX39260.317ENSGACG00000002138-10059.542Gasterosteus_aculeatus
ENSEBUG00000002129RBFOX39971.268ENSGAGG00000020025RBFOX310071.429Gopherus_agassizii
ENSEBUG00000002129RBFOX38871.885ENSGGOG00000012546RBFOX310071.037Gorilla_gorilla
ENSEBUG00000002129RBFOX39968.258ENSHBUG00000023098-9867.416Haplochromis_burtoni
ENSEBUG00000002129RBFOX39969.209ENSHBUG00000018099rbfox3b9766.234Haplochromis_burtoni
ENSEBUG00000002129RBFOX39263.032ENSHGLG00000008679RBFOX310063.171Heterocephalus_glaber_female
ENSEBUG00000002129RBFOX39260.106ENSHGLG00100014739RBFOX310059.847Heterocephalus_glaber_male
ENSEBUG00000002129RBFOX39063.240ENSHCOG00000007444RBFOX37964.062Hippocampus_comes
ENSEBUG00000002129RBFOX39362.538ENSHCOG00000001863RBFOX39360.725Hippocampus_comes
ENSEBUG00000002129RBFOX39968.347ENSIPUG00000012010rbfox3a9966.476Ictalurus_punctatus
ENSEBUG00000002129RBFOX39356.389ENSIPUG00000021966rbfox3b9466.534Ictalurus_punctatus
ENSEBUG00000002129RBFOX39262.385ENSSTOG00000026817RBFOX310059.649Ictidomys_tridecemlineatus
ENSEBUG00000002129RBFOX39261.765ENSJJAG00000014167Rbfox310062.725Jaculus_jaculus
ENSEBUG00000002129RBFOX39569.027ENSKMAG00000006726rbfox3b9764.420Kryptolebias_marmoratus
ENSEBUG00000002129RBFOX39969.492ENSLBEG00000004030rbfox3b10063.444Labrus_bergylta
ENSEBUG00000002129RBFOX39570.088ENSLBEG00000022508-9764.785Labrus_bergylta
ENSEBUG00000002129RBFOX39959.951ENSLACG00000018409-10059.705Latimeria_chalumnae
ENSEBUG00000002129RBFOX35360.656ENSLACG00000000021-9560.656Latimeria_chalumnae
ENSEBUG00000002129RBFOX39572.059ENSLOCG00000012267rbfox3a9871.765Lepisosteus_oculatus
ENSEBUG00000002129RBFOX39962.469ENSLAFG00000016623RBFOX310063.402Loxodonta_africana
ENSEBUG00000002129RBFOX39258.824ENSMFAG00000002247RBFOX310062.032Macaca_fascicularis
ENSEBUG00000002129RBFOX38871.885ENSMMUG00000023028RBFOX310071.037Macaca_mulatta
ENSEBUG00000002129RBFOX38871.565ENSMNEG00000041147RBFOX310070.732Macaca_nemestrina
ENSEBUG00000002129RBFOX38871.885ENSMLEG00000025686RBFOX310071.037Mandrillus_leucophaeus
ENSEBUG00000002129RBFOX39366.463ENSMAMG00000019810rbfox3b10063.720Mastacembelus_armatus
ENSEBUG00000002129RBFOX39964.835ENSMAMG00000020600-10063.043Mastacembelus_armatus
ENSEBUG00000002129RBFOX39969.209ENSMZEG00005000781rbfox3b9766.234Maylandia_zebra
ENSEBUG00000002129RBFOX38854.303ENSMZEG00005003055-5983.704Maylandia_zebra
ENSEBUG00000002129RBFOX36471.818ENSMGAG00000005600RBFOX38373.182Meleagris_gallopavo
ENSEBUG00000002129RBFOX39262.299ENSMAUG00000013543Rbfox310061.954Mesocricetus_auratus
ENSEBUG00000002129RBFOX39669.501ENSMICG00000014898RBFOX310070.427Microcebus_murinus
ENSEBUG00000002129RBFOX39261.765ENSMOCG00000015373Rbfox310061.954Microtus_ochrogaster
ENSEBUG00000002129RBFOX39568.035ENSMMOG00000020193rbfox3b9862.205Mola_mola
ENSEBUG00000002129RBFOX39670.845ENSMODG00000002089RBFOX39170.554Monodelphis_domestica
ENSEBUG00000002129RBFOX39969.296ENSMALG00000018270-9963.798Monopterus_albus
ENSEBUG00000002129RBFOX39568.732ENSMALG00000020407rbfox3b9763.881Monopterus_albus
ENSEBUG00000002129RBFOX39272.171MGP_CAROLIEiJ_G0017487Rbfox39683.453Mus_caroli
ENSEBUG00000002129RBFOX39272.477ENSMUSG00000025576Rbfox39683.453Mus_musculus
ENSEBUG00000002129RBFOX39273.700MGP_PahariEiJ_G0018614Rbfox39684.173Mus_pahari
ENSEBUG00000002129RBFOX39271.865MGP_SPRETEiJ_G0018331Rbfox39683.453Mus_spretus
ENSEBUG00000002129RBFOX39963.683ENSMPUG00000012319RBFOX39863.427Mustela_putorius_furo
ENSEBUG00000002129RBFOX39262.299ENSNGAG00000018006Rbfox310062.468Nannospalax_galili
ENSEBUG00000002129RBFOX39567.647ENSNBRG00000010102rbfox3b8868.437Neolamprologus_brichardi
ENSEBUG00000002129RBFOX39662.791ENSNBRG00000022885-9062.209Neolamprologus_brichardi
ENSEBUG00000002129RBFOX35767.647ENSNLEG00000000153-7268.159Nomascus_leucogenys
ENSEBUG00000002129RBFOX38573.077ENSMEUG00000004218-7154.297Notamacropus_eugenii
ENSEBUG00000002129RBFOX37668.229ENSOPRG00000016279-7968.229Ochotona_princeps
ENSEBUG00000002129RBFOX38873.163ENSODEG00000009433RBFOX310071.037Octodon_degus
ENSEBUG00000002129RBFOX39569.027ENSONIG00000009549rbfox3b10062.827Oreochromis_niloticus
ENSEBUG00000002129RBFOX39568.328ENSONIG00000007282-9567.155Oreochromis_niloticus
ENSEBUG00000002129RBFOX37257.912ENSOCUG00000014217RBFOX35577.181Oryctolagus_cuniculus
ENSEBUG00000002129RBFOX39970.538ENSORLG00000000905rbfox3b7862.935Oryzias_latipes
ENSEBUG00000002129RBFOX39970.538ENSORLG00020018030rbfox3b9664.420Oryzias_latipes_hni
ENSEBUG00000002129RBFOX39967.297ENSORLG00015009200rbfox3b9664.151Oryzias_latipes_hsok
ENSEBUG00000002129RBFOX37467.037ENSOMEG00000014677rbfox3b8161.240Oryzias_melastigma
ENSEBUG00000002129RBFOX39964.829ENSOGAG00000029595RBFOX39864.230Otolemur_garnettii
ENSEBUG00000002129RBFOX39950.000ENSOARG00000002908RBFOX310050.000Ovis_aries
ENSEBUG00000002129RBFOX37475.591ENSPPAG00000025383RBFOX39474.815Pan_paniscus
ENSEBUG00000002129RBFOX38860.907ENSPPRG00000007819RBFOX310061.957Panthera_pardus
ENSEBUG00000002129RBFOX38871.885ENSPTRG00000009727RBFOX310071.037Pan_troglodytes
ENSEBUG00000002129RBFOX38871.885ENSPANG00000019837RBFOX310071.037Papio_anubis
ENSEBUG00000002129RBFOX39958.689ENSPKIG00000022633-9358.074Paramormyrops_kingsleyae
ENSEBUG00000002129RBFOX39972.034ENSPKIG00000010299rbfox3a9265.229Paramormyrops_kingsleyae
ENSEBUG00000002129RBFOX38173.022ENSPMGG00000008000rbfox3b9665.528Periophthalmus_magnuspinnatus
ENSEBUG00000002129RBFOX39262.299ENSPEMG00000010500Rbfox310062.468Peromyscus_maniculatus_bairdii
ENSEBUG00000002129RBFOX35888.406ENSPMAG00000008689rbfox3b9989.268Petromyzon_marinus
ENSEBUG00000002129RBFOX39661.538ENSPCIG00000005766RBFOX310063.526Phascolarctos_cinereus
ENSEBUG00000002129RBFOX39969.972ENSPFOG00000018294rbfox3b9166.398Poecilia_formosa
ENSEBUG00000002129RBFOX37871.739ENSPLAG00000000481rbfox3b8068.478Poecilia_latipinna
ENSEBUG00000002129RBFOX39261.585ENSPMEG00000022997rbfox3b10060.671Poecilia_mexicana
ENSEBUG00000002129RBFOX39668.513ENSPREG00000012886rbfox3b9468.222Poecilia_reticulata
ENSEBUG00000002129RBFOX39960.734ENSPPYG00000008704RBFOX310060.000Pongo_abelii
ENSEBUG00000002129RBFOX38861.732ENSPCAG00000001401RBFOX310061.930Procavia_capensis
ENSEBUG00000002129RBFOX39359.788ENSPCOG00000012689RBFOX310061.497Propithecus_coquereli
ENSEBUG00000002129RBFOX38855.833ENSPVAG00000015243RBFOX310055.467Pteropus_vampyrus
ENSEBUG00000002129RBFOX39660.580ENSPNYG00000010414rbfox3b9657.181Pundamilia_nyererei
ENSEBUG00000002129RBFOX39661.919ENSPNYG00000009079-9358.933Pundamilia_nyererei
ENSEBUG00000002129RBFOX39968.436ENSPNAG00000002889rbfox3a9865.394Pygocentrus_nattereri
ENSEBUG00000002129RBFOX39355.352ENSPNAG00000018173rbfox3b9155.046Pygocentrus_nattereri
ENSEBUG00000002129RBFOX38873.163ENSRNOG00000003386Rbfox310070.732Rattus_norvegicus
ENSEBUG00000002129RBFOX39669.591ENSRBIG00000040449RBFOX39169.706Rhinopithecus_bieti
ENSEBUG00000002129RBFOX38871.885ENSRROG00000000766RBFOX310071.037Rhinopithecus_roxellana
ENSEBUG00000002129RBFOX38871.246ENSSBOG00000031591RBFOX310070.427Saimiri_boliviensis_boliviensis
ENSEBUG00000002129RBFOX39961.631ENSSHAG00000016076RBFOX310063.526Sarcophilus_harrisii
ENSEBUG00000002129RBFOX39559.118ENSSFOG00015004716RBFOX39361.159Scleropages_formosus
ENSEBUG00000002129RBFOX39972.034ENSSFOG00015023260rbfox3a8971.751Scleropages_formosus
ENSEBUG00000002129RBFOX39967.027ENSSMAG00000012618rbfox3b7764.888Scophthalmus_maximus
ENSEBUG00000002129RBFOX39566.864ENSSMAG00000019052-10066.258Scophthalmus_maximus
ENSEBUG00000002129RBFOX310063.115ENSSDUG00000015801-9763.115Seriola_dumerili
ENSEBUG00000002129RBFOX39261.585ENSSDUG00000023183rbfox3b10060.671Seriola_dumerili
ENSEBUG00000002129RBFOX310065.205ENSSLDG00000016098-9863.784Seriola_lalandi_dorsalis
ENSEBUG00000002129RBFOX39569.027ENSSLDG00000000149rbfox3b9764.420Seriola_lalandi_dorsalis
ENSEBUG00000002129RBFOX38871.338ENSSPUG00000011733RBFOX39971.037Sphenodon_punctatus
ENSEBUG00000002129RBFOX39660.350ENSSPAG00000017571rbfox3b9655.348Stegastes_partitus
ENSEBUG00000002129RBFOX38564.505ENSSPAG00000004898-8066.667Stegastes_partitus
ENSEBUG00000002129RBFOX38171.821ENSSSCG00000039498RBFOX310063.112Sus_scrofa
ENSEBUG00000002129RBFOX39966.667ENSTRUG00000004894rbfox3b9765.278Takifugu_rubripes
ENSEBUG00000002129RBFOX310058.612ENSTNIG00000011278rbfox3b9958.213Tetraodon_nigroviridis
ENSEBUG00000002129RBFOX36949.135ENSTBEG00000004296-5955.963Tupaia_belangeri
ENSEBUG00000002129RBFOX38854.875ENSTTRG00000003676RBFOX310056.150Tursiops_truncatus
ENSEBUG00000002129RBFOX38870.927ENSUAMG00000004668RBFOX310070.122Ursus_americanus
ENSEBUG00000002129RBFOX39970.621ENSVVUG00000017864RBFOX310070.732Vulpes_vulpes
ENSEBUG00000002129RBFOX39952.736ENSXETG00000020236rbfox39852.736Xenopus_tropicalis
ENSEBUG00000002129RBFOX39567.941ENSXCOG00000018262rbfox3b10062.385Xiphophorus_couchianus
ENSEBUG00000002129RBFOX39969.972ENSXMAG00000012939rbfox3b9765.455Xiphophorus_maculatus

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