EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000002311 (Gene tree)
Gene ID: -
Gene Symbol: sf3b5
Alias: -
Full Name: splicing factor 3b%2C subunit 5
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 258 bases
Position: chrFYBX02010286.1:2709913-2710170
Accession: ZDB-GENE-040718-181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000003125	SF3b10	PF07189.11	8.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000003489	-	258	-	ENSEBUP00000003125	85 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002311	sf3b5	100	82.353	ENSG00000169976	SF3B5	99	82.353	Homo_sapiens
ENSEBUG00000002311	sf3b5	100	81.176	ENSAPOG00000001721	sf3b5	99	81.176	Acanthochromis_polyacanthus
ENSEBUG00000002311	sf3b5	100	83.529	ENSACIG00000008106	sf3b5	99	83.529	Amphilophus_citrinellus
ENSEBUG00000002311	sf3b5	100	81.176	ENSAOCG00000023367	sf3b5	99	81.176	Amphiprion_ocellaris
ENSEBUG00000002311	sf3b5	100	81.176	ENSAPEG00000004605	sf3b5	99	81.176	Amphiprion_percula
ENSEBUG00000002311	sf3b5	100	82.353	ENSATEG00000009720	sf3b5	99	82.353	Anabas_testudineus
ENSEBUG00000002311	sf3b5	100	83.529	ENSACAG00000007948	SF3B5	99	83.529	Anolis_carolinensis
ENSEBUG00000002311	sf3b5	100	82.353	ENSANAG00000019999	SF3B5	99	82.353	Aotus_nancymaae
ENSEBUG00000002311	sf3b5	100	83.529	ENSACLG00000022410	sf3b5	99	83.529	Astatotilapia_calliptera
ENSEBUG00000002311	sf3b5	100	82.353	ENSBTAG00000009795	SF3B5	99	82.353	Bos_taurus
ENSEBUG00000002311	sf3b5	100	82.353	ENSCJAG00000046566	SF3B5	99	82.353	Callithrix_jacchus
ENSEBUG00000002311	sf3b5	100	82.353	ENSCAFG00000032495	SF3B5	99	82.353	Canis_familiaris
ENSEBUG00000002311	sf3b5	100	82.353	ENSCAFG00020000873	SF3B5	99	82.353	Canis_lupus_dingo
ENSEBUG00000002311	sf3b5	100	82.353	ENSCHIG00000007987	SF3B5	99	82.353	Capra_hircus
ENSEBUG00000002311	sf3b5	100	82.353	ENSTSYG00000012236	SF3B5	99	82.353	Carlito_syrichta
ENSEBUG00000002311	sf3b5	100	82.353	ENSCPOG00000012435	SF3B5	99	82.353	Cavia_porcellus
ENSEBUG00000002311	sf3b5	100	82.353	ENSCCAG00000006528	SF3B5	99	82.353	Cebus_capucinus
ENSEBUG00000002311	sf3b5	100	82.353	ENSCATG00000010192	SF3B5	99	82.353	Cercocebus_atys
ENSEBUG00000002311	sf3b5	100	82.353	ENSCLAG00000017802	SF3B5	99	82.353	Chinchilla_lanigera
ENSEBUG00000002311	sf3b5	100	82.353	ENSCSAG00000000187	SF3B5	99	82.353	Chlorocebus_sabaeus
ENSEBUG00000002311	sf3b5	100	82.353	ENSCPBG00000017148	SF3B5	99	82.353	Chrysemys_picta_bellii
ENSEBUG00000002311	sf3b5	96	71.951	ENSCING00000021953	-	95	71.951	Ciona_intestinalis
ENSEBUG00000002311	sf3b5	100	82.353	ENSCANG00000002639	SF3B5	99	82.353	Colobus_angolensis_palliatus
ENSEBUG00000002311	sf3b5	100	81.176	ENSCGRG00001007249	Sf3b5	99	81.176	Cricetulus_griseus_chok1gshd
ENSEBUG00000002311	sf3b5	100	81.176	ENSCGRG00000019185	Sf3b5	99	81.176	Cricetulus_griseus_crigri
ENSEBUG00000002311	sf3b5	100	82.353	ENSCSEG00000003216	sf3b5	99	82.353	Cynoglossus_semilaevis
ENSEBUG00000002311	sf3b5	100	82.353	ENSCVAG00000005040	sf3b5	99	82.353	Cyprinodon_variegatus
ENSEBUG00000002311	sf3b5	100	82.353	ENSDARG00000016855	sf3b5	99	82.353	Danio_rerio
ENSEBUG00000002311	sf3b5	100	82.353	ENSDNOG00000048829	SF3B5	81	82.353	Dasypus_novemcinctus
ENSEBUG00000002311	sf3b5	100	82.353	ENSDORG00000005838	Sf3b5	99	82.353	Dipodomys_ordii
ENSEBUG00000002311	sf3b5	100	82.353	FBgn0040534	Sf3b5	100	82.353	Drosophila_melanogaster
ENSEBUG00000002311	sf3b5	100	82.353	ENSETEG00000004047	SF3B5	99	82.353	Echinops_telfairi
ENSEBUG00000002311	sf3b5	100	82.353	ENSEASG00005009522	SF3B5	99	82.353	Equus_asinus_asinus
ENSEBUG00000002311	sf3b5	100	82.353	ENSECAG00000005457	SF3B5	99	82.353	Equus_caballus
ENSEBUG00000002311	sf3b5	100	82.353	ENSELUG00000014290	SF3B5	99	82.353	Esox_lucius
ENSEBUG00000002311	sf3b5	100	82.353	ENSFCAG00000000936	SF3B5	99	82.353	Felis_catus
ENSEBUG00000002311	sf3b5	100	81.176	ENSFALG00000015012	SF3B5	99	81.176	Ficedula_albicollis
ENSEBUG00000002311	sf3b5	100	82.353	ENSFDAG00000003664	SF3B5	99	82.353	Fukomys_damarensis
ENSEBUG00000002311	sf3b5	100	82.353	ENSFHEG00000020301	sf3b5	99	82.353	Fundulus_heteroclitus
ENSEBUG00000002311	sf3b5	100	83.529	ENSGMOG00000019972	sf3b5	99	83.529	Gadus_morhua
ENSEBUG00000002311	sf3b5	100	83.529	ENSGALG00000030824	SF3B5	99	83.529	Gallus_gallus
ENSEBUG00000002311	sf3b5	100	82.353	ENSGAFG00000000271	sf3b5	99	82.353	Gambusia_affinis
ENSEBUG00000002311	sf3b5	100	82.353	ENSGACG00000010363	sf3b5	99	82.353	Gasterosteus_aculeatus
ENSEBUG00000002311	sf3b5	100	82.353	ENSGAGG00000011434	SF3B5	99	82.353	Gopherus_agassizii
ENSEBUG00000002311	sf3b5	93	82.278	ENSGAGG00000000646	-	92	82.278	Gopherus_agassizii
ENSEBUG00000002311	sf3b5	100	82.353	ENSGGOG00000001537	SF3B5	99	82.353	Gorilla_gorilla
ENSEBUG00000002311	sf3b5	100	83.529	ENSHBUG00000008925	sf3b5	99	83.529	Haplochromis_burtoni
ENSEBUG00000002311	sf3b5	100	82.353	ENSHGLG00000021406	SF3B5	99	82.353	Heterocephalus_glaber_female
ENSEBUG00000002311	sf3b5	100	82.353	ENSHGLG00100020370	SF3B5	99	82.353	Heterocephalus_glaber_male
ENSEBUG00000002311	sf3b5	100	81.176	ENSHCOG00000016806	sf3b5	99	81.176	Hippocampus_comes
ENSEBUG00000002311	sf3b5	100	81.176	ENSHCOG00000016802	sf3b5	99	81.176	Hippocampus_comes
ENSEBUG00000002311	sf3b5	100	81.176	ENSHCOG00000009115	-	99	81.176	Hippocampus_comes
ENSEBUG00000002311	sf3b5	100	82.353	ENSIPUG00000015166	sf3b5	99	82.353	Ictalurus_punctatus
ENSEBUG00000002311	sf3b5	100	82.353	ENSSTOG00000003347	SF3B5	99	82.353	Ictidomys_tridecemlineatus
ENSEBUG00000002311	sf3b5	100	82.353	ENSJJAG00000001857	Sf3b5	99	82.353	Jaculus_jaculus
ENSEBUG00000002311	sf3b5	100	82.353	ENSKMAG00000002249	sf3b5	99	82.353	Kryptolebias_marmoratus
ENSEBUG00000002311	sf3b5	100	82.353	ENSLBEG00000019847	sf3b5	99	82.353	Labrus_bergylta
ENSEBUG00000002311	sf3b5	100	81.176	ENSLACG00000000946	SF3B5	99	81.176	Latimeria_chalumnae
ENSEBUG00000002311	sf3b5	100	83.529	ENSLOCG00000017352	sf3b5	99	83.529	Lepisosteus_oculatus
ENSEBUG00000002311	sf3b5	100	82.353	ENSLAFG00000032489	SF3B5	99	82.353	Loxodonta_africana
ENSEBUG00000002311	sf3b5	100	82.353	ENSMFAG00000029753	SF3B5	99	82.353	Macaca_fascicularis
ENSEBUG00000002311	sf3b5	100	82.353	ENSMMUG00000047691	SF3B5	99	82.353	Macaca_mulatta
ENSEBUG00000002311	sf3b5	100	82.353	ENSMNEG00000028236	SF3B5	99	82.353	Macaca_nemestrina
ENSEBUG00000002311	sf3b5	100	82.353	ENSMLEG00000007622	SF3B5	99	82.353	Mandrillus_leucophaeus
ENSEBUG00000002311	sf3b5	100	83.529	ENSMAMG00000021639	sf3b5	99	83.529	Mastacembelus_armatus
ENSEBUG00000002311	sf3b5	100	83.529	ENSMZEG00005028115	SF3B5	99	83.529	Maylandia_zebra
ENSEBUG00000002311	sf3b5	100	83.529	ENSMZEG00005027408	sf3b5	99	83.529	Maylandia_zebra
ENSEBUG00000002311	sf3b5	100	75.294	ENSMZEG00005027407	sf3b5	99	75.294	Maylandia_zebra
ENSEBUG00000002311	sf3b5	100	83.529	ENSMGAG00000015849	SF3B5	99	83.529	Meleagris_gallopavo
ENSEBUG00000002311	sf3b5	100	81.176	ENSMAUG00000008283	Sf3b5	99	81.176	Mesocricetus_auratus
ENSEBUG00000002311	sf3b5	100	82.353	ENSMICG00000014922	SF3B5	99	82.353	Microcebus_murinus
ENSEBUG00000002311	sf3b5	100	81.176	ENSMOCG00000001713	Sf3b5	99	81.176	Microtus_ochrogaster
ENSEBUG00000002311	sf3b5	100	83.529	ENSMMOG00000007956	sf3b5	99	83.529	Mola_mola
ENSEBUG00000002311	sf3b5	100	82.353	ENSMODG00000023291	SF3B5	83	82.353	Monodelphis_domestica
ENSEBUG00000002311	sf3b5	92	81.481	ENSMALG00000020357	sf3b5	99	81.481	Monopterus_albus
ENSEBUG00000002311	sf3b5	100	81.176	MGP_CAROLIEiJ_G0015120	Sf3b5	99	81.176	Mus_caroli
ENSEBUG00000002311	sf3b5	100	81.176	ENSMUSG00000078348	Sf3b5	99	81.176	Mus_musculus
ENSEBUG00000002311	sf3b5	100	81.176	MGP_PahariEiJ_G0023739	Sf3b5	99	81.176	Mus_pahari
ENSEBUG00000002311	sf3b5	100	81.176	MGP_SPRETEiJ_G0015928	Sf3b5	99	81.176	Mus_spretus
ENSEBUG00000002311	sf3b5	100	82.353	ENSMPUG00000018379	SF3B5	99	82.353	Mustela_putorius_furo
ENSEBUG00000002311	sf3b5	96	80.488	ENSMLUG00000025546	-	95	80.488	Myotis_lucifugus
ENSEBUG00000002311	sf3b5	100	77.647	ENSMLUG00000010802	-	99	77.647	Myotis_lucifugus
ENSEBUG00000002311	sf3b5	100	82.353	ENSMLUG00000028504	-	99	82.353	Myotis_lucifugus
ENSEBUG00000002311	sf3b5	100	82.353	ENSNGAG00000010732	Sf3b5	99	82.353	Nannospalax_galili
ENSEBUG00000002311	sf3b5	100	83.529	ENSNBRG00000014383	sf3b5	99	83.529	Neolamprologus_brichardi
ENSEBUG00000002311	sf3b5	100	82.353	ENSNLEG00000019307	SF3B5	99	82.353	Nomascus_leucogenys
ENSEBUG00000002311	sf3b5	100	82.353	ENSMEUG00000005445	-	99	82.353	Notamacropus_eugenii
ENSEBUG00000002311	sf3b5	100	82.353	ENSMEUG00000005440	-	99	82.353	Notamacropus_eugenii
ENSEBUG00000002311	sf3b5	100	83.529	ENSOPRG00000015107	SF3B5	99	83.529	Ochotona_princeps
ENSEBUG00000002311	sf3b5	100	82.353	ENSODEG00000019507	SF3B5	99	82.353	Octodon_degus
ENSEBUG00000002311	sf3b5	100	83.529	ENSONIG00000020725	sf3b5	99	83.529	Oreochromis_niloticus
ENSEBUG00000002311	sf3b5	68	77.586	ENSOANG00000015301	SF3B5	95	77.586	Ornithorhynchus_anatinus
ENSEBUG00000002311	sf3b5	100	82.353	ENSOCUG00000008752	SF3B5	99	82.353	Oryctolagus_cuniculus
ENSEBUG00000002311	sf3b5	100	84.706	ENSORLG00000004925	sf3b5	99	84.706	Oryzias_latipes
ENSEBUG00000002311	sf3b5	100	84.706	ENSORLG00020011625	sf3b5	99	84.706	Oryzias_latipes_hni
ENSEBUG00000002311	sf3b5	100	84.706	ENSORLG00015017061	sf3b5	99	84.706	Oryzias_latipes_hsok
ENSEBUG00000002311	sf3b5	100	84.706	ENSOMEG00000010620	sf3b5	99	84.706	Oryzias_melastigma
ENSEBUG00000002311	sf3b5	100	82.353	ENSOGAG00000012152	SF3B5	99	82.353	Otolemur_garnettii
ENSEBUG00000002311	sf3b5	100	83.529	ENSOARG00000002617	SF3B5	99	83.529	Ovis_aries
ENSEBUG00000002311	sf3b5	92	85.897	ENSOARG00000019486	-	94	85.897	Ovis_aries
ENSEBUG00000002311	sf3b5	100	82.353	ENSPPAG00000012940	SF3B5	99	82.353	Pan_paniscus
ENSEBUG00000002311	sf3b5	100	82.353	ENSPPRG00000021262	SF3B5	99	82.353	Panthera_pardus
ENSEBUG00000002311	sf3b5	100	82.353	ENSPTIG00000001952	SF3B5	99	82.353	Panthera_tigris_altaica
ENSEBUG00000002311	sf3b5	100	82.353	ENSPTRG00000018676	SF3B5	99	82.353	Pan_troglodytes
ENSEBUG00000002311	sf3b5	100	82.353	ENSPANG00000034242	SF3B5	99	82.353	Papio_anubis
ENSEBUG00000002311	sf3b5	100	84.706	ENSPKIG00000006057	sf3b5	99	84.706	Paramormyrops_kingsleyae
ENSEBUG00000002311	sf3b5	100	82.353	ENSPSIG00000001262	SF3B5	99	82.353	Pelodiscus_sinensis
ENSEBUG00000002311	sf3b5	100	81.176	ENSPMGG00000014804	sf3b5	99	81.176	Periophthalmus_magnuspinnatus
ENSEBUG00000002311	sf3b5	100	81.176	ENSPEMG00000012931	Sf3b5	99	81.176	Peromyscus_maniculatus_bairdii
ENSEBUG00000002311	sf3b5	100	88.235	ENSPMAG00000010296	sf3b5	99	88.235	Petromyzon_marinus
ENSEBUG00000002311	sf3b5	93	87.342	ENSPCIG00000011344	-	77	87.342	Phascolarctos_cinereus
ENSEBUG00000002311	sf3b5	100	64.706	ENSPCIG00000025007	-	99	64.706	Phascolarctos_cinereus
ENSEBUG00000002311	sf3b5	100	82.353	ENSPFOG00000019994	sf3b5	99	82.353	Poecilia_formosa
ENSEBUG00000002311	sf3b5	100	82.353	ENSPLAG00000008412	sf3b5	99	82.353	Poecilia_latipinna
ENSEBUG00000002311	sf3b5	100	82.353	ENSPMEG00000020050	sf3b5	99	82.353	Poecilia_mexicana
ENSEBUG00000002311	sf3b5	100	82.353	ENSPREG00000009242	sf3b5	99	82.353	Poecilia_reticulata
ENSEBUG00000002311	sf3b5	100	82.353	ENSPPYG00000017068	SF3B5	99	82.353	Pongo_abelii
ENSEBUG00000002311	sf3b5	100	82.353	ENSPCAG00000009332	SF3B5	99	82.353	Procavia_capensis
ENSEBUG00000002311	sf3b5	100	82.353	ENSPCOG00000013754	SF3B5	99	82.353	Propithecus_coquereli
ENSEBUG00000002311	sf3b5	56	87.500	ENSPVAG00000002820	SF3B5	100	87.500	Pteropus_vampyrus
ENSEBUG00000002311	sf3b5	100	83.529	ENSPNYG00000002075	sf3b5	99	83.529	Pundamilia_nyererei
ENSEBUG00000002311	sf3b5	100	83.529	ENSPNAG00000004942	sf3b5	99	83.529	Pygocentrus_nattereri
ENSEBUG00000002311	sf3b5	100	81.176	ENSRNOG00000014908	Sf3b5	99	81.176	Rattus_norvegicus
ENSEBUG00000002311	sf3b5	100	82.353	ENSRBIG00000006301	SF3B5	99	82.353	Rhinopithecus_bieti
ENSEBUG00000002311	sf3b5	100	82.353	ENSRROG00000037067	SF3B5	99	82.353	Rhinopithecus_roxellana
ENSEBUG00000002311	sf3b5	100	82.353	ENSSBOG00000006122	SF3B5	99	82.353	Saimiri_boliviensis_boliviensis
ENSEBUG00000002311	sf3b5	100	82.353	ENSSHAG00000015670	SF3B5	99	82.353	Sarcophilus_harrisii
ENSEBUG00000002311	sf3b5	100	84.706	ENSSFOG00015015767	sf3b5	99	84.706	Scleropages_formosus
ENSEBUG00000002311	sf3b5	100	82.353	ENSSMAG00000018852	sf3b5	99	82.353	Scophthalmus_maximus
ENSEBUG00000002311	sf3b5	100	82.353	ENSSDUG00000018161	sf3b5	99	82.353	Seriola_dumerili
ENSEBUG00000002311	sf3b5	100	82.353	ENSSLDG00000014547	sf3b5	99	82.353	Seriola_lalandi_dorsalis
ENSEBUG00000002311	sf3b5	100	82.353	ENSSARG00000007820	SF3B5	99	82.353	Sorex_araneus
ENSEBUG00000002311	sf3b5	100	81.176	ENSSPAG00000009244	sf3b5	99	81.176	Stegastes_partitus
ENSEBUG00000002311	sf3b5	100	81.176	ENSSPAG00000017371	-	99	81.176	Stegastes_partitus
ENSEBUG00000002311	sf3b5	100	82.353	ENSSSCG00000035578	SF3B5	99	82.353	Sus_scrofa
ENSEBUG00000002311	sf3b5	100	83.529	ENSTGUG00000010810	SF3B5	99	83.529	Taeniopygia_guttata
ENSEBUG00000002311	sf3b5	100	82.353	ENSTRUG00000005577	sf3b5	99	82.353	Takifugu_rubripes
ENSEBUG00000002311	sf3b5	100	82.353	ENSTNIG00000001265	sf3b5	99	82.353	Tetraodon_nigroviridis
ENSEBUG00000002311	sf3b5	100	83.529	ENSTBEG00000003072	SF3B5	99	83.529	Tupaia_belangeri
ENSEBUG00000002311	sf3b5	100	82.353	ENSTTRG00000008817	SF3B5	99	82.353	Tursiops_truncatus
ENSEBUG00000002311	sf3b5	100	82.353	ENSUAMG00000027296	SF3B5	99	82.353	Ursus_americanus
ENSEBUG00000002311	sf3b5	100	82.353	ENSUMAG00000005448	SF3B5	99	82.353	Ursus_maritimus
ENSEBUG00000002311	sf3b5	100	82.353	ENSVPAG00000003826	SF3B5	99	82.353	Vicugna_pacos
ENSEBUG00000002311	sf3b5	100	82.353	ENSVVUG00000004703	SF3B5	99	82.353	Vulpes_vulpes
ENSEBUG00000002311	sf3b5	100	83.529	ENSXETG00000021409	sf3b5	99	83.529	Xenopus_tropicalis
ENSEBUG00000002311	sf3b5	100	82.353	ENSXMAG00000019971	sf3b5	99	82.353	Xiphophorus_maculatus