EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSEBUG00000002322 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Plus strand
Length
25236 bases
Position
chrFYBX02010249.1:4214094-4239329
Accession
ZDB-GENE-040426-2401
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000003152RRM_1PF00076.228.8e-1611
ENSEBUP00000003162RRM_1PF00076.228.8e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000003526-1167-ENSEBUP00000003162231 (aa)--
ENSEBUT00000003516-1367-ENSEBUP00000003152231 (aa)--
Gene Model
Click here to download ENSEBUG00000002322's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002322's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000002322pabpn18180.000ENSG00000258643BCL2L2-PABPN15780.000Homo_sapiens
ENSEBUG00000002322pabpn18379.897ENSG00000100836PABPN110078.771Homo_sapiens
ENSEBUG00000002322pabpn19972.845ENSAPOG00000016425pabpn19972.845Acanthochromis_polyacanthus
ENSEBUG00000002322pabpn18180.000ENSAMEG00000007048BCL2L2-PABPN110080.000Ailuropoda_melanoleuca
ENSEBUG00000002322pabpn19670.925ENSACIG00000021744pabpn110080.791Amphilophus_citrinellus
ENSEBUG00000002322pabpn19972.845ENSAOCG00000015805pabpn19972.845Amphiprion_ocellaris
ENSEBUG00000002322pabpn19972.845ENSAPEG00000009623pabpn19972.845Amphiprion_percula
ENSEBUG00000002322pabpn19972.845ENSATEG00000020531pabpn19972.845Anabas_testudineus
ENSEBUG00000002322pabpn18177.895ENSACAG00000006185-6777.895Anolis_carolinensis
ENSEBUG00000002322pabpn18379.897ENSANAG00000024513-7079.487Aotus_nancymaae
ENSEBUG00000002322pabpn19670.614ENSACLG00000016374pabpn17770.614Astatotilapia_calliptera
ENSEBUG00000002322pabpn19973.276ENSAMXG00000000452pabpn110081.356Astyanax_mexicanus
ENSEBUG00000002322pabpn18379.897ENSBTAG00000006884PABPN16379.487Bos_taurus
ENSEBUG00000002322pabpn18279.688ENSBTAG00000053753-7179.688Bos_taurus
ENSEBUG00000002322pabpn17379.532ENSBTAG00000050594-6879.651Bos_taurus
ENSEBUG00000002322pabpn16956.790WBGene00003904pabp-29950.691Caenorhabditis_elegans
ENSEBUG00000002322pabpn19871.616ENSCJAG00000007960-8471.179Callithrix_jacchus
ENSEBUG00000002322pabpn17276.786ENSCJAG00000004407-8977.654Callithrix_jacchus
ENSEBUG00000002322pabpn18479.487ENSCAFG00000011482PABPN16379.487Canis_familiaris
ENSEBUG00000002322pabpn18379.897ENSCAFG00020007298-6379.487Canis_lupus_dingo
ENSEBUG00000002322pabpn18379.897ENSCAFG00020006651-6379.487Canis_lupus_dingo
ENSEBUG00000002322pabpn18379.897ENSCHIG00000012184PABPN16379.487Capra_hircus
ENSEBUG00000002322pabpn18180.000ENSTSYG00000033996BCL2L2-PABPN110078.771Carlito_syrichta
ENSEBUG00000002322pabpn16077.698ENSCAPG00000009461-9977.698Cavia_aperea
ENSEBUG00000002322pabpn18379.381ENSCPOG00000025574PABPN16378.974Cavia_porcellus
ENSEBUG00000002322pabpn19871.616ENSCCAG00000033954BCL2L2-PABPN18471.179Cebus_capucinus
ENSEBUG00000002322pabpn19871.616ENSCATG00000038536BCL2L2-PABPN18471.179Cercocebus_atys
ENSEBUG00000002322pabpn16578.146ENSCLAG00000012423PABPN15678.146Chinchilla_lanigera
ENSEBUG00000002322pabpn18378.351ENSCSAG00000016036PABPN16377.949Chlorocebus_sabaeus
ENSEBUG00000002322pabpn18175.263ENSCHOG00000004798BCL2L2-PABPN18175.263Choloepus_hoffmanni
ENSEBUG00000002322pabpn17277.976ENSCPBG00000026060-10078.771Chrysemys_picta_bellii
ENSEBUG00000002322pabpn110058.723ENSCING00000012468-9958.723Ciona_intestinalis
ENSEBUG00000002322pabpn17763.128ENSCSAVG00000002001-10063.128Ciona_savignyi
ENSEBUG00000002322pabpn18369.271ENSCANG00000030980-8758.921Colobus_angolensis_palliatus
ENSEBUG00000002322pabpn18180.000ENSCANG00000009750BCL2L2-PABPN110078.771Colobus_angolensis_palliatus
ENSEBUG00000002322pabpn18379.381ENSCGRG00001019696Pabpn110078.212Cricetulus_griseus_chok1gshd
ENSEBUG00000002322pabpn17277.381ENSCGRG00000011102Pabpn19683.117Cricetulus_griseus_crigri
ENSEBUG00000002322pabpn19973.276ENSCSEG00000008774pabpn19973.276Cynoglossus_semilaevis
ENSEBUG00000002322pabpn19972.103ENSCVAG00000003152pabpn19971.915Cyprinodon_variegatus
ENSEBUG00000002322pabpn19972.414ENSDARG00000045373pabpn19972.414Danio_rerio
ENSEBUG00000002322pabpn18052.973ENSDARG00000087996pabpn1l9654.545Danio_rerio
ENSEBUG00000002322pabpn18379.897ENSDNOG00000023682PABPN16379.487Dasypus_novemcinctus
ENSEBUG00000002322pabpn17762.570ENSDORG00000023928-10062.570Dipodomys_ordii
ENSEBUG00000002322pabpn18379.897ENSDORG00000028966-6379.487Dipodomys_ordii
ENSEBUG00000002322pabpn18261.658FBgn0005648Pabp28261.658Drosophila_melanogaster
ENSEBUG00000002322pabpn18379.897ENSEASG00005011716PABPN16379.487Equus_asinus_asinus
ENSEBUG00000002322pabpn18180.000ENSECAG00000011652PABPN16179.235Equus_caballus
ENSEBUG00000002322pabpn18376.804ENSEEUG00000012973-7470.320Erinaceus_europaeus
ENSEBUG00000002322pabpn19971.186ENSELUG00000022654pabpn19971.186Esox_lucius
ENSEBUG00000002322pabpn18379.897ENSFCAG00000031922PABPN16379.487Felis_catus
ENSEBUG00000002322pabpn17276.786ENSFDAG00000018381BCL2L2-PABPN110077.654Fukomys_damarensis
ENSEBUG00000002322pabpn19971.552ENSFHEG00000007215pabpn19971.552Fundulus_heteroclitus
ENSEBUG00000002322pabpn19672.000ENSGMOG00000003922pabpn17672.000Gadus_morhua
ENSEBUG00000002322pabpn18378.571ENSGALG00000052930-6274.419Gallus_gallus
ENSEBUG00000002322pabpn19972.961ENSGAFG00000017099pabpn19972.766Gambusia_affinis
ENSEBUG00000002322pabpn19968.699ENSGACG00000002167pabpn19969.106Gasterosteus_aculeatus
ENSEBUG00000002322pabpn18964.977ENSGGOG00000025919-9968.333Gorilla_gorilla
ENSEBUG00000002322pabpn19871.616ENSGGOG00000022683-8471.179Gorilla_gorilla
ENSEBUG00000002322pabpn18567.347ENSGGOG00000039675-7367.347Gorilla_gorilla
ENSEBUG00000002322pabpn19972.845ENSHBUG00000019523pabpn19972.845Haplochromis_burtoni
ENSEBUG00000002322pabpn18666.832ENSHGLG00000018588-6567.692Heterocephalus_glaber_female
ENSEBUG00000002322pabpn18379.381ENSHGLG00000002927-10081.132Heterocephalus_glaber_female
ENSEBUG00000002322pabpn17259.524ENSHGLG00000009842-10061.453Heterocephalus_glaber_female
ENSEBUG00000002322pabpn18666.832ENSHGLG00100015565-6667.692Heterocephalus_glaber_male
ENSEBUG00000002322pabpn17268.421ENSHGLG00100018935-10069.945Heterocephalus_glaber_male
ENSEBUG00000002322pabpn17679.213ENSHGLG00100006673-10081.132Heterocephalus_glaber_male
ENSEBUG00000002322pabpn19969.828ENSHCOG00000004655pabpn19972.414Hippocampus_comes
ENSEBUG00000002322pabpn19972.414ENSIPUG00000008085PABPN19972.414Ictalurus_punctatus
ENSEBUG00000002322pabpn19471.681ENSIPUG00000000180-9871.681Ictalurus_punctatus
ENSEBUG00000002322pabpn17277.976ENSSTOG00000029847BCL2L2-PABPN110078.771Ictidomys_tridecemlineatus
ENSEBUG00000002322pabpn17277.976ENSJJAG00000023507Gm2052110078.771Jaculus_jaculus
ENSEBUG00000002322pabpn19973.391ENSKMAG00000018748pabpn19973.391Kryptolebias_marmoratus
ENSEBUG00000002322pabpn19972.845ENSLBEG00000027266pabpn19972.845Labrus_bergylta
ENSEBUG00000002322pabpn17679.888ENSLACG00000000646pabpn18277.128Latimeria_chalumnae
ENSEBUG00000002322pabpn18365.803ENSLOCG00000004694pabpn1l8965.803Lepisosteus_oculatus
ENSEBUG00000002322pabpn18576.961ENSLOCG00000000796pabpn17276.961Lepisosteus_oculatus
ENSEBUG00000002322pabpn16578.808ENSLAFG00000031227-9978.808Loxodonta_africana
ENSEBUG00000002322pabpn16171.127ENSMFAG00000031355-9971.127Macaca_fascicularis
ENSEBUG00000002322pabpn18180.000ENSMFAG00000032183BCL2L2-PABPN110078.771Macaca_fascicularis
ENSEBUG00000002322pabpn18365.979ENSMMUG00000048382-6466.667Macaca_mulatta
ENSEBUG00000002322pabpn18180.000ENSMMUG00000014747BCL2L2-PABPN110078.231Macaca_mulatta
ENSEBUG00000002322pabpn18066.129ENSMNEG00000035750-9971.127Macaca_nemestrina
ENSEBUG00000002322pabpn19871.616ENSMNEG00000045065BCL2L2-PABPN18471.179Macaca_nemestrina
ENSEBUG00000002322pabpn18180.000ENSMLEG00000043862BCL2L2-PABPN110078.771Mandrillus_leucophaeus
ENSEBUG00000002322pabpn17264.072ENSMLEG00000034623-9969.718Mandrillus_leucophaeus
ENSEBUG00000002322pabpn19772.926ENSMAMG00000007979pabpn17972.926Mastacembelus_armatus
ENSEBUG00000002322pabpn19672.000ENSMZEG00005011904pabpn17672.000Maylandia_zebra
ENSEBUG00000002322pabpn18379.381ENSMAUG00000007383Gm205216578.974Mesocricetus_auratus
ENSEBUG00000002322pabpn19872.052ENSMICG00000010002BCL2L2-PABPN18471.616Microcebus_murinus
ENSEBUG00000002322pabpn18379.381ENSMOCG00000018557Gm205219085.714Microtus_ochrogaster
ENSEBUG00000002322pabpn19972.845ENSMMOG00000005405pabpn19972.845Mola_mola
ENSEBUG00000002322pabpn18380.311ENSMODG00000004535-6380.311Monodelphis_domestica
ENSEBUG00000002322pabpn19772.489ENSMALG00000019612pabpn17872.489Monopterus_albus
ENSEBUG00000002322pabpn18178.421MGP_CAROLIEiJ_G0019276Gm205215778.421Mus_caroli
ENSEBUG00000002322pabpn18378.351MGP_CAROLIEiJ_G0019277Pabpn110077.095Mus_caroli
ENSEBUG00000002322pabpn18178.947ENSMUSG00000092232Gm205215778.947Mus_musculus
ENSEBUG00000002322pabpn18378.866ENSMUSG00000022194Pabpn110077.654Mus_musculus
ENSEBUG00000002322pabpn18178.947MGP_PahariEiJ_G0030294Gm205215778.947Mus_pahari
ENSEBUG00000002322pabpn18378.866MGP_PahariEiJ_G0030295Pabpn110085.714Mus_pahari
ENSEBUG00000002322pabpn18178.947MGP_SPRETEiJ_G0020165Gm205215778.947Mus_spretus
ENSEBUG00000002322pabpn18378.866MGP_SPRETEiJ_G0020166Pabpn110077.654Mus_spretus
ENSEBUG00000002322pabpn16777.564ENSMPUG00000006775-9978.443Mustela_putorius_furo
ENSEBUG00000002322pabpn18476.923ENSMLUG00000028677-8568.240Myotis_lucifugus
ENSEBUG00000002322pabpn18178.421ENSMLUG00000003800-10078.421Myotis_lucifugus
ENSEBUG00000002322pabpn18476.020ENSMLUG00000012452-6477.041Myotis_lucifugus
ENSEBUG00000002322pabpn18180.000ENSNGAG00000019529Gm205215780.000Nannospalax_galili
ENSEBUG00000002322pabpn19672.000ENSNBRG00000023955pabpn110080.791Neolamprologus_brichardi
ENSEBUG00000002322pabpn18565.657ENSNLEG00000030598-7366.667Nomascus_leucogenys
ENSEBUG00000002322pabpn18379.897ENSNLEG00000015007-6979.487Nomascus_leucogenys
ENSEBUG00000002322pabpn16558.389ENSNLEG00000035292-9958.389Nomascus_leucogenys
ENSEBUG00000002322pabpn17768.715ENSODEG00000011555-9568.715Octodon_degus
ENSEBUG00000002322pabpn18472.021ENSODEG00000003739-6572.021Octodon_degus
ENSEBUG00000002322pabpn18379.381ENSODEG00000002083BCL2L2-PABPN16378.974Octodon_degus
ENSEBUG00000002322pabpn19672.000ENSONIG00000008112pabpn17672.000Oreochromis_niloticus
ENSEBUG00000002322pabpn16479.592ENSOANG00000009218-10079.592Ornithorhynchus_anatinus
ENSEBUG00000002322pabpn18378.866ENSOCUG00000016174PABPN17178.462Oryctolagus_cuniculus
ENSEBUG00000002322pabpn19772.489ENSORLG00000027900pabpn19371.806Oryzias_latipes
ENSEBUG00000002322pabpn19772.489ENSORLG00020004681pabpn17872.489Oryzias_latipes_hni
ENSEBUG00000002322pabpn19972.845ENSORLG00015000018pabpn19972.845Oryzias_latipes_hsok
ENSEBUG00000002322pabpn19870.996ENSOMEG00000016618pabpn18370.996Oryzias_melastigma
ENSEBUG00000002322pabpn18379.897ENSOGAG00000008710PABPN16379.487Otolemur_garnettii
ENSEBUG00000002322pabpn18180.000ENSOARG00000019336BCL2L2-PABPN15280.000Ovis_aries
ENSEBUG00000002322pabpn17265.060ENSPPAG00000039421-10066.667Pan_paniscus
ENSEBUG00000002322pabpn18180.000ENSPPAG00000028984BCL2L2-PABPN19978.443Pan_paniscus
ENSEBUG00000002322pabpn18379.897ENSPPRG00000010567PABPN16379.487Panthera_pardus
ENSEBUG00000002322pabpn17277.976ENSPTIG00000001063BCL2L2-PABPN110078.771Panthera_tigris_altaica
ENSEBUG00000002322pabpn19871.616ENSPTRG00000006167BCL2L28471.179Pan_troglodytes
ENSEBUG00000002322pabpn18565.816ENSPTRG00000047273-7365.816Pan_troglodytes
ENSEBUG00000002322pabpn18366.495ENSPANG00000023326-9971.831Papio_anubis
ENSEBUG00000002322pabpn19871.616ENSPANG00000021100BCL2L2-PABPN18471.179Papio_anubis
ENSEBUG00000002322pabpn19971.552ENSPKIG00000018052pabpn19971.552Paramormyrops_kingsleyae
ENSEBUG00000002322pabpn17169.325ENSPKIG00000008340pabpn1l9062.694Paramormyrops_kingsleyae
ENSEBUG00000002322pabpn19772.926ENSPKIG00000008144-7872.926Paramormyrops_kingsleyae
ENSEBUG00000002322pabpn15969.853ENSPSIG00000011959-9669.853Pelodiscus_sinensis
ENSEBUG00000002322pabpn19671.111ENSPMGG00000022027pabpn18071.111Periophthalmus_magnuspinnatus
ENSEBUG00000002322pabpn18379.381ENSPEMG00000008332Gm205219383.117Peromyscus_maniculatus_bairdii
ENSEBUG00000002322pabpn17979.891ENSPMAG00000006212pabpn110073.554Petromyzon_marinus
ENSEBUG00000002322pabpn18481.026ENSPCIG00000027751-6381.026Phascolarctos_cinereus
ENSEBUG00000002322pabpn19972.340ENSPFOG00000010351pabpn19972.574Poecilia_formosa
ENSEBUG00000002322pabpn19772.609ENSPLAG00000022696pabpn17872.414Poecilia_latipinna
ENSEBUG00000002322pabpn19972.532ENSPMEG00000020856pabpn19972.766Poecilia_mexicana
ENSEBUG00000002322pabpn19972.532ENSPREG00000011278pabpn19972.766Poecilia_reticulata
ENSEBUG00000002322pabpn17879.670ENSPPYG00000005663PABPN16579.235Pongo_abelii
ENSEBUG00000002322pabpn17765.574ENSPCAG00000005902PABPN16265.217Procavia_capensis
ENSEBUG00000002322pabpn19872.052ENSPCOG00000028047BCL2L2-PABPN18471.616Propithecus_coquereli
ENSEBUG00000002322pabpn18378.351ENSPVAG00000005270PABPN16477.949Pteropus_vampyrus
ENSEBUG00000002322pabpn19972.845ENSPNYG00000013182pabpn19972.845Pundamilia_nyererei
ENSEBUG00000002322pabpn19973.276ENSPNAG00000023526pabpn19973.276Pygocentrus_nattereri
ENSEBUG00000002322pabpn19257.277ENSPNAG00000021666pabpn1l9960.748Pygocentrus_nattereri
ENSEBUG00000002322pabpn18378.866ENSRNOG00000042195Pabpn16478.462Rattus_norvegicus
ENSEBUG00000002322pabpn18469.948ENSRBIG00000042811-8070.312Rhinopithecus_bieti
ENSEBUG00000002322pabpn17679.775ENSRBIG00000040762BCL2L2-PABPN15579.775Rhinopithecus_bieti
ENSEBUG00000002322pabpn18369.271ENSRBIG00000039547-7067.188Rhinopithecus_bieti
ENSEBUG00000002322pabpn17679.775ENSRROG00000045535BCL2L2-PABPN110078.771Rhinopithecus_roxellana
ENSEBUG00000002322pabpn18369.792ENSRROG00000040409-7067.708Rhinopithecus_roxellana
ENSEBUG00000002322pabpn18467.358ENSRROG00000036409-5967.358Rhinopithecus_roxellana
ENSEBUG00000002322pabpn18174.877ENSSBOG00000026930BCL2L2-PABPN19978.443Saimiri_boliviensis_boliviensis
ENSEBUG00000002322pabpn18368.557ENSSHAG00000007707-8268.557Sarcophilus_harrisii
ENSEBUG00000002322pabpn18181.579ENSSHAG00000014841-8781.579Sarcophilus_harrisii
ENSEBUG00000002322pabpn19475.455ENSSFOG00015012565pabpn19975.455Scleropages_formosus
ENSEBUG00000002322pabpn16867.949ENSSFOG00015015833pabpn1l8763.492Scleropages_formosus
ENSEBUG00000002322pabpn19972.845ENSSFOG00015014718pabpn19972.845Scleropages_formosus
ENSEBUG00000002322pabpn19972.845ENSSMAG00000020157pabpn19972.845Scophthalmus_maximus
ENSEBUG00000002322pabpn19772.489ENSSDUG00000020582pabpn17872.489Seriola_dumerili
ENSEBUG00000002322pabpn19972.845ENSSLDG00000007118pabpn19972.845Seriola_lalandi_dorsalis
ENSEBUG00000002322pabpn17276.190ENSSPUG00000018308-10077.095Sphenodon_punctatus
ENSEBUG00000002322pabpn19972.845ENSSPAG00000021658pabpn19972.845Stegastes_partitus
ENSEBUG00000002322pabpn18379.897ENSSSCG00000002023PABPN16379.487Sus_scrofa
ENSEBUG00000002322pabpn18361.140ENSSSCG00000034805-7161.140Sus_scrofa
ENSEBUG00000002322pabpn17644.633ENSSSCG00000038472-9744.633Sus_scrofa
ENSEBUG00000002322pabpn19971.552ENSTRUG00000023664pabpn19971.552Takifugu_rubripes
ENSEBUG00000002322pabpn19273.585ENSTNIG00000005369pabpn19173.585Tetraodon_nigroviridis
ENSEBUG00000002322pabpn18379.897ENSUAMG00000024460PABPN16379.487Ursus_americanus
ENSEBUG00000002322pabpn18180.000ENSUMAG00000014288BCL2L2-PABPN15780.000Ursus_maritimus
ENSEBUG00000002322pabpn18180.000ENSVVUG00000019912BCL2L2-PABPN17480.000Vulpes_vulpes
ENSEBUG00000002322pabpn18480.000ENSXETG00000014597pabpn16580.000Xenopus_tropicalis
ENSEBUG00000002322pabpn17471.512ENSXCOG00000005158pabpn19871.839Xiphophorus_couchianus
ENSEBUG00000002322pabpn19972.532ENSXMAG00000006196pabpn19972.766Xiphophorus_maculatus

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