EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000002343 (Gene tree)
Gene ID: -
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein%2C homolog (yeast)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 32811 bases
Position: chrFYBX02010252.1:6380419-6413229
Accession: ZDB-GENE-040426-1062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000003185	S4	PF01479.25	1.5e-07	1	1
ENSEBUP00000003171	S4	PF01479.25	1.6e-07	1	1
ENSEBUP00000003185	Ribosomal_S4	PF00163.19	3e-07	1	1
ENSEBUP00000003171	Ribosomal_S4	PF00163.19	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000003549	-	1371	-	ENSEBUP00000003185	181 (aa)	-	-
ENSEBUT00000003535	-	1489	-	ENSEBUP00000003171	183 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002343	imp3	99	72.928	ENSAPOG00000014720	imp3	99	72.928	Acanthochromis_polyacanthus
ENSEBUG00000002343	imp3	99	67.582	ENSAMEG00000019247	IMP3	99	67.582	Ailuropoda_melanoleuca
ENSEBUG00000002343	imp3	100	71.196	ENSACIG00000022070	imp3	98	71.196	Amphilophus_citrinellus
ENSEBUG00000002343	imp3	99	73.481	ENSAOCG00000015761	imp3	99	73.481	Amphiprion_ocellaris
ENSEBUG00000002343	imp3	100	72.527	ENSAPEG00000005250	imp3	99	72.527	Amphiprion_percula
ENSEBUG00000002343	imp3	100	73.077	ENSATEG00000020021	imp3	99	73.077	Anabas_testudineus
ENSEBUG00000002343	imp3	100	63.978	ENSACAG00000016259	IMP3	99	63.978	Anolis_carolinensis
ENSEBUG00000002343	imp3	99	66.484	ENSANAG00000016669	-	99	66.484	Aotus_nancymaae
ENSEBUG00000002343	imp3	99	56.593	ENSANAG00000036874	-	99	56.593	Aotus_nancymaae
ENSEBUG00000002343	imp3	99	73.481	ENSACLG00000009929	imp3	99	73.481	Astatotilapia_calliptera
ENSEBUG00000002343	imp3	96	72.727	ENSAMXG00000018715	imp3	100	72.727	Astyanax_mexicanus
ENSEBUG00000002343	imp3	99	49.171	WBGene00016740	C48B6.2	99	49.171	Caenorhabditis_elegans
ENSEBUG00000002343	imp3	99	66.484	ENSCJAG00000044585	IMP3	99	66.484	Callithrix_jacchus
ENSEBUG00000002343	imp3	99	65.385	ENSCAFG00000018039	IMP3	81	65.385	Canis_familiaris
ENSEBUG00000002343	imp3	99	65.385	ENSCAFG00020003760	-	99	65.385	Canis_lupus_dingo
ENSEBUG00000002343	imp3	99	54.696	ENSCAFG00020006737	-	99	56.044	Canis_lupus_dingo
ENSEBUG00000002343	imp3	99	67.033	ENSCHIG00000006295	IMP3	99	67.033	Capra_hircus
ENSEBUG00000002343	imp3	99	67.033	ENSTSYG00000005503	IMP3	99	67.033	Carlito_syrichta
ENSEBUG00000002343	imp3	99	67.033	ENSCPOG00000012016	IMP3	99	67.033	Cavia_porcellus
ENSEBUG00000002343	imp3	99	59.669	ENSCCAG00000023378	-	99	58.621	Cebus_capucinus
ENSEBUG00000002343	imp3	99	66.484	ENSCCAG00000002712	-	99	66.484	Cebus_capucinus
ENSEBUG00000002343	imp3	99	67.033	ENSCATG00000015188	IMP3	99	67.033	Cercocebus_atys
ENSEBUG00000002343	imp3	99	67.033	ENSCSAG00000019732	IMP3	99	67.033	Chlorocebus_sabaeus
ENSEBUG00000002343	imp3	99	67.582	ENSCHOG00000012046	IMP3	99	67.582	Choloepus_hoffmanni
ENSEBUG00000002343	imp3	100	61.413	ENSCPBG00000021662	IMP3	99	61.413	Chrysemys_picta_bellii
ENSEBUG00000002343	imp3	99	61.111	ENSCING00000004233	-	99	61.111	Ciona_intestinalis
ENSEBUG00000002343	imp3	99	61.111	ENSCSAVG00000000698	-	99	61.111	Ciona_savignyi
ENSEBUG00000002343	imp3	99	67.033	ENSCANG00000018342	IMP3	99	67.033	Colobus_angolensis_palliatus
ENSEBUG00000002343	imp3	99	67.033	ENSCGRG00001001326	Imp3	99	67.033	Cricetulus_griseus_chok1gshd
ENSEBUG00000002343	imp3	99	67.033	ENSCGRG00000018907	Imp3	99	67.033	Cricetulus_griseus_crigri
ENSEBUG00000002343	imp3	99	75.138	ENSCSEG00000017200	imp3	99	75.138	Cynoglossus_semilaevis
ENSEBUG00000002343	imp3	99	68.306	ENSCVAG00000019511	imp3	99	68.306	Cyprinodon_variegatus
ENSEBUG00000002343	imp3	99	76.243	ENSDARG00000115266	imp3	99	76.243	Danio_rerio
ENSEBUG00000002343	imp3	99	66.484	ENSDNOG00000015787	IMP3	80	66.484	Dasypus_novemcinctus
ENSEBUG00000002343	imp3	99	66.484	ENSDORG00000029301	Imp3	99	66.484	Dipodomys_ordii
ENSEBUG00000002343	imp3	99	56.906	FBgn0034232	CG4866	100	56.906	Drosophila_melanogaster
ENSEBUG00000002343	imp3	99	67.582	ENSETEG00000004278	IMP3	99	67.582	Echinops_telfairi
ENSEBUG00000002343	imp3	99	66.484	ENSEASG00005015693	IMP3	99	66.484	Equus_asinus_asinus
ENSEBUG00000002343	imp3	99	67.033	ENSECAG00000015786	IMP3	99	67.033	Equus_caballus
ENSEBUG00000002343	imp3	99	75.691	ENSELUG00000023264	imp3	99	75.691	Esox_lucius
ENSEBUG00000002343	imp3	99	67.033	ENSFCAG00000040328	IMP3	99	67.033	Felis_catus
ENSEBUG00000002343	imp3	71	54.615	ENSFALG00000014811	IMP3	98	57.692	Ficedula_albicollis
ENSEBUG00000002343	imp3	99	67.033	ENSFDAG00000018422	IMP3	99	67.033	Fukomys_damarensis
ENSEBUG00000002343	imp3	99	71.823	ENSFHEG00000016954	imp3	99	71.823	Fundulus_heteroclitus
ENSEBUG00000002343	imp3	100	73.077	ENSGMOG00000018162	imp3	99	73.077	Gadus_morhua
ENSEBUG00000002343	imp3	100	54.348	ENSGALG00000040238	IMP3	99	56.522	Gallus_gallus
ENSEBUG00000002343	imp3	99	71.823	ENSGAFG00000007425	imp3	99	71.823	Gambusia_affinis
ENSEBUG00000002343	imp3	100	74.725	ENSGACG00000015998	imp3	99	74.725	Gasterosteus_aculeatus
ENSEBUG00000002343	imp3	100	61.413	ENSGAGG00000008163	IMP3	99	61.413	Gopherus_agassizii
ENSEBUG00000002343	imp3	99	67.033	ENSGGOG00000025122	IMP3	99	67.033	Gorilla_gorilla
ENSEBUG00000002343	imp3	99	73.481	ENSHBUG00000018453	imp3	99	73.481	Haplochromis_burtoni
ENSEBUG00000002343	imp3	99	67.033	ENSHGLG00000019824	IMP3	99	67.033	Heterocephalus_glaber_female
ENSEBUG00000002343	imp3	99	67.033	ENSHGLG00100020660	IMP3	99	67.033	Heterocephalus_glaber_male
ENSEBUG00000002343	imp3	99	74.033	ENSHCOG00000020565	imp3	99	74.033	Hippocampus_comes
ENSEBUG00000002343	imp3	99	74.033	ENSIPUG00000013142	imp3	99	74.033	Ictalurus_punctatus
ENSEBUG00000002343	imp3	99	67.033	ENSSTOG00000030143	IMP3	99	67.033	Ictidomys_tridecemlineatus
ENSEBUG00000002343	imp3	100	73.077	ENSKMAG00000001956	imp3	99	73.077	Kryptolebias_marmoratus
ENSEBUG00000002343	imp3	100	71.429	ENSLBEG00000008178	imp3	99	71.429	Labrus_bergylta
ENSEBUG00000002343	imp3	100	75.275	ENSLACG00000022148	imp3	99	75.275	Latimeria_chalumnae
ENSEBUG00000002343	imp3	99	72.928	ENSLOCG00000010237	imp3	99	72.928	Lepisosteus_oculatus
ENSEBUG00000002343	imp3	99	66.484	ENSLAFG00000004425	IMP3	99	66.484	Loxodonta_africana
ENSEBUG00000002343	imp3	99	67.033	ENSMFAG00000008867	IMP3	99	67.033	Macaca_fascicularis
ENSEBUG00000002343	imp3	99	67.033	ENSMMUG00000016103	IMP3	99	67.033	Macaca_mulatta
ENSEBUG00000002343	imp3	99	67.033	ENSMNEG00000026328	IMP3	99	67.033	Macaca_nemestrina
ENSEBUG00000002343	imp3	99	72.376	ENSMAMG00000003215	imp3	99	72.376	Mastacembelus_armatus
ENSEBUG00000002343	imp3	99	73.481	ENSMZEG00005005544	imp3	99	73.481	Maylandia_zebra
ENSEBUG00000002343	imp3	99	66.484	ENSMAUG00000010279	Imp3	99	66.484	Mesocricetus_auratus
ENSEBUG00000002343	imp3	99	67.033	ENSMICG00000044149	IMP3	99	67.033	Microcebus_murinus
ENSEBUG00000002343	imp3	99	67.033	ENSMOCG00000008647	Imp3	99	67.033	Microtus_ochrogaster
ENSEBUG00000002343	imp3	98	71.667	ENSMMOG00000018117	imp3	86	71.667	Mola_mola
ENSEBUG00000002343	imp3	99	64.835	ENSMODG00000025193	IMP3	99	65.385	Monodelphis_domestica
ENSEBUG00000002343	imp3	99	73.481	ENSMALG00000006505	imp3	99	73.481	Monopterus_albus
ENSEBUG00000002343	imp3	99	67.033	MGP_CAROLIEiJ_G0032258	Imp3	99	67.033	Mus_caroli
ENSEBUG00000002343	imp3	99	67.582	ENSMUSG00000032288	Imp3	99	67.582	Mus_musculus
ENSEBUG00000002343	imp3	99	67.033	MGP_PahariEiJ_G0015125	Imp3	99	67.033	Mus_pahari
ENSEBUG00000002343	imp3	99	67.582	MGP_SPRETEiJ_G0033398	Imp3	99	67.582	Mus_spretus
ENSEBUG00000002343	imp3	99	66.484	ENSMPUG00000020147	IMP3	99	66.484	Mustela_putorius_furo
ENSEBUG00000002343	imp3	99	67.033	ENSMLUG00000014032	IMP3	99	67.033	Myotis_lucifugus
ENSEBUG00000002343	imp3	99	65.934	ENSNGAG00000017248	Imp3	99	65.934	Nannospalax_galili
ENSEBUG00000002343	imp3	99	73.481	ENSNBRG00000004060	imp3	99	73.481	Neolamprologus_brichardi
ENSEBUG00000002343	imp3	99	68.132	ENSOPRG00000015906	-	99	68.132	Ochotona_princeps
ENSEBUG00000002343	imp3	99	67.033	ENSODEG00000020194	IMP3	99	67.033	Octodon_degus
ENSEBUG00000002343	imp3	99	72.376	ENSONIG00000010661	imp3	99	72.376	Oreochromis_niloticus
ENSEBUG00000002343	imp3	99	67.033	ENSOCUG00000004690	IMP3	99	67.033	Oryctolagus_cuniculus
ENSEBUG00000002343	imp3	100	70.879	ENSORLG00000004484	imp3	99	70.879	Oryzias_latipes
ENSEBUG00000002343	imp3	100	70.879	ENSORLG00020003771	imp3	99	70.879	Oryzias_latipes_hni
ENSEBUG00000002343	imp3	100	70.330	ENSORLG00015006933	imp3	99	70.330	Oryzias_latipes_hsok
ENSEBUG00000002343	imp3	100	70.330	ENSOMEG00000016160	imp3	99	70.330	Oryzias_melastigma
ENSEBUG00000002343	imp3	99	67.033	ENSOGAG00000004917	IMP3	99	67.033	Otolemur_garnettii
ENSEBUG00000002343	imp3	99	67.033	ENSPPAG00000009241	IMP3	99	67.033	Pan_paniscus
ENSEBUG00000002343	imp3	99	67.033	ENSPPRG00000018701	IMP3	99	67.033	Panthera_pardus
ENSEBUG00000002343	imp3	99	67.033	ENSPTRG00000052235	IMP3	99	67.033	Pan_troglodytes
ENSEBUG00000002343	imp3	99	67.033	ENSPANG00000013668	IMP3	99	67.033	Papio_anubis
ENSEBUG00000002343	imp3	99	75.138	ENSPKIG00000007169	imp3	99	75.138	Paramormyrops_kingsleyae
ENSEBUG00000002343	imp3	100	63.784	ENSPMGG00000009379	imp3	99	63.784	Periophthalmus_magnuspinnatus
ENSEBUG00000002343	imp3	99	67.033	ENSPEMG00000013003	Imp3	99	67.033	Peromyscus_maniculatus_bairdii
ENSEBUG00000002343	imp3	99	71.823	ENSPFOG00000016529	imp3	99	71.823	Poecilia_formosa
ENSEBUG00000002343	imp3	99	72.376	ENSPLAG00000013831	imp3	99	72.376	Poecilia_latipinna
ENSEBUG00000002343	imp3	99	71.823	ENSPMEG00000000797	imp3	99	71.823	Poecilia_mexicana
ENSEBUG00000002343	imp3	99	71.823	ENSPREG00000006885	imp3	99	71.823	Poecilia_reticulata
ENSEBUG00000002343	imp3	99	67.033	ENSPPYG00000006664	IMP3	99	67.033	Pongo_abelii
ENSEBUG00000002343	imp3	99	67.033	ENSPCAG00000006920	IMP3	99	67.033	Procavia_capensis
ENSEBUG00000002343	imp3	99	67.033	ENSPCOG00000012367	IMP3	99	67.033	Propithecus_coquereli
ENSEBUG00000002343	imp3	99	67.582	ENSPVAG00000010036	IMP3	99	67.582	Pteropus_vampyrus
ENSEBUG00000002343	imp3	99	73.481	ENSPNYG00000000324	imp3	99	73.481	Pundamilia_nyererei
ENSEBUG00000002343	imp3	99	73.481	ENSPNAG00000017113	imp3	99	73.481	Pygocentrus_nattereri
ENSEBUG00000002343	imp3	99	67.033	ENSRNOG00000017460	Imp3	99	67.033	Rattus_norvegicus
ENSEBUG00000002343	imp3	99	67.033	ENSRBIG00000024522	IMP3	99	67.033	Rhinopithecus_bieti
ENSEBUG00000002343	imp3	99	67.033	ENSRROG00000024157	IMP3	99	67.033	Rhinopithecus_roxellana
ENSEBUG00000002343	imp3	100	51.913	YHR148W	-	100	51.913	Saccharomyces_cerevisiae
ENSEBUG00000002343	imp3	99	56.593	ENSSBOG00000026404	-	99	56.593	Saimiri_boliviensis_boliviensis
ENSEBUG00000002343	imp3	99	66.484	ENSSBOG00000006542	-	99	66.484	Saimiri_boliviensis_boliviensis
ENSEBUG00000002343	imp3	99	64.286	ENSSHAG00000006200	IMP3	99	64.286	Sarcophilus_harrisii
ENSEBUG00000002343	imp3	99	73.481	ENSSFOG00015012483	imp3	99	73.481	Scleropages_formosus
ENSEBUG00000002343	imp3	99	71.823	ENSSMAG00000007865	imp3	99	71.823	Scophthalmus_maximus
ENSEBUG00000002343	imp3	99	72.928	ENSSDUG00000010594	imp3	99	72.928	Seriola_dumerili
ENSEBUG00000002343	imp3	99	72.928	ENSSLDG00000015587	imp3	99	72.928	Seriola_lalandi_dorsalis
ENSEBUG00000002343	imp3	99	67.582	ENSSARG00000009657	IMP3	99	67.582	Sorex_araneus
ENSEBUG00000002343	imp3	99	72.928	ENSSPAG00000002088	imp3	99	72.928	Stegastes_partitus
ENSEBUG00000002343	imp3	100	53.804	ENSTGUG00000013228	IMP3	99	55.978	Taeniopygia_guttata
ENSEBUG00000002343	imp3	99	71.823	ENSTRUG00000025783	imp3	99	71.823	Takifugu_rubripes
ENSEBUG00000002343	imp3	99	67.582	ENSUAMG00000022724	IMP3	99	67.582	Ursus_americanus
ENSEBUG00000002343	imp3	99	67.582	ENSUMAG00000003736	IMP3	99	67.582	Ursus_maritimus
ENSEBUG00000002343	imp3	99	65.934	ENSVVUG00000019589	IMP3	99	65.934	Vulpes_vulpes
ENSEBUG00000002343	imp3	96	71.023	ENSXCOG00000007392	imp3	96	71.023	Xiphophorus_couchianus
ENSEBUG00000002343	imp3	99	72.376	ENSXMAG00000023049	imp3	99	72.376	Xiphophorus_maculatus