EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000002362 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 62060 bases
Position: chrFYBX02010154.1:7020336-7082395
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000003224	RRM_1	PF00076.22	9.4e-45	1	3
ENSEBUP00000003224	RRM_1	PF00076.22	9.4e-45	2	3
ENSEBUP00000003224	RRM_1	PF00076.22	9.4e-45	3	3
ENSEBUP00000003207	RRM_1	PF00076.22	1.2e-44	1	3
ENSEBUP00000003207	RRM_1	PF00076.22	1.2e-44	2	3
ENSEBUP00000003207	RRM_1	PF00076.22	1.2e-44	3	3
ENSEBUP00000003250	RRM_1	PF00076.22	1.2e-44	1	3
ENSEBUP00000003250	RRM_1	PF00076.22	1.2e-44	2	3
ENSEBUP00000003250	RRM_1	PF00076.22	1.2e-44	3	3
ENSEBUP00000003259	RRM_1	PF00076.22	6.7e-36	1	2
ENSEBUP00000003259	RRM_1	PF00076.22	6.7e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000003625	-	3934	-	ENSEBUP00000003259	722 (aa)	-	-
ENSEBUT00000003590	-	5429	-	ENSEBUP00000003224	766 (aa)	-	-
ENSEBUT00000003616	-	4408	-	ENSEBUP00000003250	818 (aa)	-	-
ENSEBUT00000003572	-	5771	-	ENSEBUP00000003207	818 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000002362	-	80	80.576	ENSEBUG00000008128	-	89	80.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002362	-	51	67.368	ENSDARG00000002131	celf2	75	70.588	Danio_rerio
ENSEBUG00000002362	-	67	69.811	ENSELUG00000008279	-	65	74.046	Esox_lucius
ENSEBUG00000002362	-	53	67.368	ENSELUG00000005848	-	72	70.588	Esox_lucius
ENSEBUG00000002362	-	72	62.326	ENSFHEG00000007136	-	75	73.684	Fundulus_heteroclitus
ENSEBUG00000002362	-	54	62.562	ENSGMOG00000010163	-	70	73.485	Gadus_morhua
ENSEBUG00000002362	-	69	69.481	ENSMAMG00000023208	-	70	73.485	Mastacembelus_armatus
ENSEBUG00000002362	-	50	62.069	ENSORLG00000003894	-	70	72.180	Oryzias_latipes
ENSEBUG00000002362	-	50	61.714	ENSORLG00020015261	-	69	71.642	Oryzias_latipes_hni
ENSEBUG00000002362	-	50	62.069	ENSORLG00015008084	-	69	72.180	Oryzias_latipes_hsok
ENSEBUG00000002362	-	53	66.842	ENSPKIG00000025033	-	71	71.324	Paramormyrops_kingsleyae
ENSEBUG00000002362	-	51	62.842	ENSPFOG00000013076	-	69	73.684	Poecilia_formosa
ENSEBUG00000002362	-	51	62.500	ENSPMEG00000007082	-	69	73.134	Poecilia_mexicana
ENSEBUG00000002362	-	50	64.045	ENSPREG00000007795	-	70	74.809	Poecilia_reticulata
ENSEBUG00000002362	-	55	54.737	ENSPCAG00000010882	CELF2	64	69.853	Procavia_capensis
ENSEBUG00000002362	-	51	67.368	ENSPNAG00000006639	celf2	69	70.588	Pygocentrus_nattereri
ENSEBUG00000002362	-	92	44.669	ENSSDUG00000022515	-	75	74.809	Seriola_dumerili
ENSEBUG00000002362	-	92	44.669	ENSSLDG00000010918	-	74	74.809	Seriola_lalandi_dorsalis
ENSEBUG00000002362	-	55	54.737	ENSTTRG00000014665	CELF2	66	63.971	Tursiops_truncatus