EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000002377 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 92560 bases
Position: chrFYBX02010237.1:399378-491937
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000003244	dsrm	PF00035.26	9.7e-34	1	2
ENSEBUP00000003244	dsrm	PF00035.26	9.7e-34	2	2
ENSEBUP00000003233	dsrm	PF00035.26	1.4e-30	1	2
ENSEBUP00000003233	dsrm	PF00035.26	1.4e-30	2	2
ENSEBUP00000003233	DND1_DSRM	PF14709.7	1.4e-11	1	1
ENSEBUP00000003244	DND1_DSRM	PF14709.7	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000003610	-	3341	-	ENSEBUP00000003244	319 (aa)	-	-
ENSEBUT00000003599	-	2557	-	ENSEBUP00000003233	324 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002377	tarbp2	96	56.305	ENSG00000139546	TARBP2	84	85.135	Homo_sapiens
ENSEBUG00000002377	tarbp2	98	59.451	ENSAPOG00000019892	tarbp2	95	58.232	Acanthochromis_polyacanthus
ENSEBUG00000002377	tarbp2	96	55.425	ENSAMEG00000012601	TARBP2	95	54.598	Ailuropoda_melanoleuca
ENSEBUG00000002377	tarbp2	98	60.559	ENSACIG00000016780	tarbp2	95	59.938	Amphilophus_citrinellus
ENSEBUG00000002377	tarbp2	98	59.451	ENSAOCG00000005201	tarbp2	95	58.359	Amphiprion_ocellaris
ENSEBUG00000002377	tarbp2	98	59.451	ENSAPEG00000008376	tarbp2	95	58.359	Amphiprion_percula
ENSEBUG00000002377	tarbp2	98	59.451	ENSATEG00000025012	tarbp2	95	58.841	Anabas_testudineus
ENSEBUG00000002377	tarbp2	96	57.015	ENSACAG00000001100	TARBP2	95	55.263	Anolis_carolinensis
ENSEBUG00000002377	tarbp2	96	57.270	ENSANAG00000034453	TARBP2	95	55.814	Aotus_nancymaae
ENSEBUG00000002377	tarbp2	98	59.756	ENSACLG00000018569	tarbp2	95	58.841	Astatotilapia_calliptera
ENSEBUG00000002377	tarbp2	98	58.788	ENSAMXG00000016665	tarbp2	95	59.146	Astyanax_mexicanus
ENSEBUG00000002377	tarbp2	96	56.598	ENSBTAG00000000435	TARBP2	95	55.172	Bos_taurus
ENSEBUG00000002377	tarbp2	96	57.270	ENSCJAG00000018668	TARBP2	95	55.814	Callithrix_jacchus
ENSEBUG00000002377	tarbp2	98	58.537	ENSCAFG00000006874	TARBP2	95	57.622	Canis_familiaris
ENSEBUG00000002377	tarbp2	96	56.012	ENSCAFG00020020735	TARBP2	99	56.305	Canis_lupus_dingo
ENSEBUG00000002377	tarbp2	96	55.942	ENSCHIG00000026017	TARBP2	95	54.261	Capra_hircus
ENSEBUG00000002377	tarbp2	96	57.018	ENSTSYG00000035683	TARBP2	95	56.160	Carlito_syrichta
ENSEBUG00000002377	tarbp2	64	59.624	ENSCAPG00000008981	TARBP2	94	58.216	Cavia_aperea
ENSEBUG00000002377	tarbp2	96	56.433	ENSCPOG00000001009	TARBP2	93	56.140	Cavia_porcellus
ENSEBUG00000002377	tarbp2	96	56.891	ENSCCAG00000033025	TARBP2	83	89.583	Cebus_capucinus
ENSEBUG00000002377	tarbp2	96	56.305	ENSCATG00000026344	TARBP2	61	89.583	Cercocebus_atys
ENSEBUG00000002377	tarbp2	96	56.140	ENSCLAG00000009175	TARBP2	95	55.014	Chinchilla_lanigera
ENSEBUG00000002377	tarbp2	96	57.478	ENSCSAG00000005479	TARBP2	95	55.460	Chlorocebus_sabaeus
ENSEBUG00000002377	tarbp2	99	56.936	ENSCPBG00000000654	TARBP2	99	56.716	Chrysemys_picta_bellii
ENSEBUG00000002377	tarbp2	96	56.140	ENSCANG00000040415	TARBP2	83	89.583	Colobus_angolensis_palliatus
ENSEBUG00000002377	tarbp2	96	56.305	ENSCGRG00001011856	TARBP2	95	54.598	Cricetulus_griseus_chok1gshd
ENSEBUG00000002377	tarbp2	96	56.305	ENSCGRG00000009088	TARBP2	98	57.917	Cricetulus_griseus_crigri
ENSEBUG00000002377	tarbp2	98	60.815	ENSCSEG00000010631	tarbp2	94	59.875	Cynoglossus_semilaevis
ENSEBUG00000002377	tarbp2	98	59.215	ENSCVAG00000009832	tarbp2	95	58.308	Cyprinodon_variegatus
ENSEBUG00000002377	tarbp2	98	60.303	ENSDARG00000070471	tarbp2	95	59.394	Danio_rerio
ENSEBUG00000002377	tarbp2	96	56.433	ENSDNOG00000002144	TARBP2	95	55.587	Dasypus_novemcinctus
ENSEBUG00000002377	tarbp2	64	59.155	ENSDORG00000001390	Tarbp2	87	57.746	Dipodomys_ordii
ENSEBUG00000002377	tarbp2	80	80.328	ENSETEG00000002458	TARBP2	77	80.247	Echinops_telfairi
ENSEBUG00000002377	tarbp2	96	56.598	ENSEASG00005010030	TARBP2	95	55.460	Equus_asinus_asinus
ENSEBUG00000002377	tarbp2	96	59.259	ENSECAG00000011695	TARBP2	95	57.402	Equus_caballus
ENSEBUG00000002377	tarbp2	81	53.584	ENSEEUG00000001128	-	93	53.584	Erinaceus_europaeus
ENSEBUG00000002377	tarbp2	98	57.751	ENSELUG00000010642	tarbp2	95	56.839	Esox_lucius
ENSEBUG00000002377	tarbp2	96	56.891	ENSFCAG00000007757	TARBP2	95	55.172	Felis_catus
ENSEBUG00000002377	tarbp2	96	55.848	ENSFDAG00000011932	TARBP2	98	58.921	Fukomys_damarensis
ENSEBUG00000002377	tarbp2	96	59.568	ENSFHEG00000016118	tarbp2	99	58.642	Fundulus_heteroclitus
ENSEBUG00000002377	tarbp2	96	59.692	ENSGMOG00000001290	tarbp2	95	58.055	Gadus_morhua
ENSEBUG00000002377	tarbp2	67	59.174	ENSGALG00000038939	-	83	57.798	Gallus_gallus
ENSEBUG00000002377	tarbp2	98	58.232	ENSGAFG00000013341	tarbp2	95	57.012	Gambusia_affinis
ENSEBUG00000002377	tarbp2	98	55.325	ENSGACG00000006645	tarbp2	95	55.621	Gasterosteus_aculeatus
ENSEBUG00000002377	tarbp2	99	57.514	ENSGAGG00000021169	TARBP2	96	56.358	Gopherus_agassizii
ENSEBUG00000002377	tarbp2	96	56.305	ENSGGOG00000012637	TARBP2	61	89.583	Gorilla_gorilla
ENSEBUG00000002377	tarbp2	98	59.756	ENSHBUG00000018639	tarbp2	95	58.841	Haplochromis_burtoni
ENSEBUG00000002377	tarbp2	96	55.848	ENSHGLG00000001284	TARBP2	95	54.728	Heterocephalus_glaber_female
ENSEBUG00000002377	tarbp2	96	55.848	ENSHGLG00100011274	TARBP2	95	54.728	Heterocephalus_glaber_male
ENSEBUG00000002377	tarbp2	98	60.061	ENSHCOG00000001027	tarbp2	95	59.146	Hippocampus_comes
ENSEBUG00000002377	tarbp2	98	61.129	ENSIPUG00000023701	tarbp2	94	60.188	Ictalurus_punctatus
ENSEBUG00000002377	tarbp2	96	56.598	ENSSTOG00000003678	TARBP2	98	58.333	Ictidomys_tridecemlineatus
ENSEBUG00000002377	tarbp2	98	60.061	ENSKMAG00000012142	tarbp2	95	59.146	Kryptolebias_marmoratus
ENSEBUG00000002377	tarbp2	98	58.912	ENSLBEG00000015027	tarbp2	96	58.006	Labrus_bergylta
ENSEBUG00000002377	tarbp2	99	52.870	ENSLACG00000007087	TARBP2	95	51.964	Latimeria_chalumnae
ENSEBUG00000002377	tarbp2	96	61.300	ENSLOCG00000005711	tarbp2	93	60.372	Lepisosteus_oculatus
ENSEBUG00000002377	tarbp2	71	54.902	ENSLAFG00000002620	TARBP2	95	51.852	Loxodonta_africana
ENSEBUG00000002377	tarbp2	96	56.305	ENSMFAG00000013567	TARBP2	61	89.583	Macaca_fascicularis
ENSEBUG00000002377	tarbp2	96	56.305	ENSMMUG00000018492	TARBP2	95	55.460	Macaca_mulatta
ENSEBUG00000002377	tarbp2	96	56.305	ENSMNEG00000036477	TARBP2	61	89.583	Macaca_nemestrina
ENSEBUG00000002377	tarbp2	96	58.824	ENSMLEG00000029583	TARBP2	95	57.273	Mandrillus_leucophaeus
ENSEBUG00000002377	tarbp2	96	61.587	ENSMAMG00000010272	tarbp2	98	56.647	Mastacembelus_armatus
ENSEBUG00000002377	tarbp2	98	59.756	ENSMZEG00005006895	tarbp2	95	58.841	Maylandia_zebra
ENSEBUG00000002377	tarbp2	96	56.305	ENSMAUG00000019805	Tarbp2	95	54.885	Mesocricetus_auratus
ENSEBUG00000002377	tarbp2	96	56.598	ENSMICG00000027441	TARBP2	99	56.305	Microcebus_murinus
ENSEBUG00000002377	tarbp2	96	56.598	ENSMOCG00000003691	Tarbp2	95	55.172	Microtus_ochrogaster
ENSEBUG00000002377	tarbp2	96	59.692	ENSMMOG00000010374	tarbp2	99	58.462	Mola_mola
ENSEBUG00000002377	tarbp2	97	59.385	ENSMALG00000009773	tarbp2	95	58.232	Monopterus_albus
ENSEBUG00000002377	tarbp2	98	55.460	MGP_CAROLIEiJ_G0020356	Tarbp2	83	89.583	Mus_caroli
ENSEBUG00000002377	tarbp2	98	55.460	ENSMUSG00000023051	Tarbp2	83	89.583	Mus_musculus
ENSEBUG00000002377	tarbp2	98	55.172	MGP_PahariEiJ_G0020355	Tarbp2	83	89.583	Mus_pahari
ENSEBUG00000002377	tarbp2	98	55.460	MGP_SPRETEiJ_G0021249	Tarbp2	83	89.583	Mus_spretus
ENSEBUG00000002377	tarbp2	96	57.059	ENSMPUG00000005944	TARBP2	93	56.176	Mustela_putorius_furo
ENSEBUG00000002377	tarbp2	96	56.305	ENSMLUG00000010035	TARBP2	95	55.172	Myotis_lucifugus
ENSEBUG00000002377	tarbp2	96	56.305	ENSNLEG00000017690	TARBP2	61	89.583	Nomascus_leucogenys
ENSEBUG00000002377	tarbp2	96	62.379	ENSMEUG00000001916	TARBP2	95	60.377	Notamacropus_eugenii
ENSEBUG00000002377	tarbp2	67	59.009	ENSOPRG00000011397	TARBP2	98	57.658	Ochotona_princeps
ENSEBUG00000002377	tarbp2	60	59.091	ENSODEG00000013413	TARBP2	97	60.000	Octodon_degus
ENSEBUG00000002377	tarbp2	98	60.828	ENSONIG00000005115	tarbp2	93	59.873	Oreochromis_niloticus
ENSEBUG00000002377	tarbp2	96	55.718	ENSOCUG00000005700	TARBP2	95	54.023	Oryctolagus_cuniculus
ENSEBUG00000002377	tarbp2	96	61.613	ENSORLG00000005209	tarbp2	95	59.621	Oryzias_latipes
ENSEBUG00000002377	tarbp2	98	58.716	ENSORLG00020017755	tarbp2	95	57.798	Oryzias_latipes_hni
ENSEBUG00000002377	tarbp2	98	58.716	ENSORLG00015013237	tarbp2	95	57.798	Oryzias_latipes_hsok
ENSEBUG00000002377	tarbp2	98	59.633	ENSOMEG00000018860	tarbp2	95	58.716	Oryzias_melastigma
ENSEBUG00000002377	tarbp2	98	55.460	ENSOGAG00000001744	TARBP2	95	55.172	Otolemur_garnettii
ENSEBUG00000002377	tarbp2	96	56.305	ENSOARG00000016437	TARBP2	95	55.172	Ovis_aries
ENSEBUG00000002377	tarbp2	96	56.305	ENSPPAG00000030429	TARBP2	61	89.583	Pan_paniscus
ENSEBUG00000002377	tarbp2	96	56.891	ENSPPRG00000000189	TARBP2	95	55.172	Panthera_pardus
ENSEBUG00000002377	tarbp2	96	58.084	ENSPTIG00000007859	TARBP2	95	56.305	Panthera_tigris_altaica
ENSEBUG00000002377	tarbp2	96	56.305	ENSPTRG00000005020	TARBP2	61	89.583	Pan_troglodytes
ENSEBUG00000002377	tarbp2	96	56.305	ENSPANG00000010689	TARBP2	61	89.583	Papio_anubis
ENSEBUG00000002377	tarbp2	98	60.423	ENSPKIG00000002455	tarbp2	95	59.517	Paramormyrops_kingsleyae
ENSEBUG00000002377	tarbp2	98	59.939	ENSPMGG00000006497	tarbp2	95	59.021	Periophthalmus_magnuspinnatus
ENSEBUG00000002377	tarbp2	96	56.891	ENSPEMG00000014285	Tarbp2	95	55.172	Peromyscus_maniculatus_bairdii
ENSEBUG00000002377	tarbp2	95	66.993	ENSPMAG00000000105	tarbp2	99	66.340	Petromyzon_marinus
ENSEBUG00000002377	tarbp2	96	62.581	ENSPCIG00000006672	TARBP2	87	60.568	Phascolarctos_cinereus
ENSEBUG00000002377	tarbp2	98	58.537	ENSPFOG00000007586	tarbp2	95	57.622	Poecilia_formosa
ENSEBUG00000002377	tarbp2	98	58.537	ENSPLAG00000017659	tarbp2	95	57.927	Poecilia_latipinna
ENSEBUG00000002377	tarbp2	98	58.537	ENSPMEG00000007775	tarbp2	95	57.622	Poecilia_mexicana
ENSEBUG00000002377	tarbp2	98	58.841	ENSPREG00000007815	tarbp2	95	57.927	Poecilia_reticulata
ENSEBUG00000002377	tarbp2	96	60.127	ENSPPYG00000004583	TARBP2	95	58.204	Pongo_abelii
ENSEBUG00000002377	tarbp2	67	57.919	ENSPCAG00000005352	TARBP2	60	56.561	Procavia_capensis
ENSEBUG00000002377	tarbp2	96	56.598	ENSPCOG00000013102	TARBP2	61	89.583	Propithecus_coquereli
ENSEBUG00000002377	tarbp2	96	56.598	ENSPVAG00000012286	TARBP2	95	54.885	Pteropus_vampyrus
ENSEBUG00000002377	tarbp2	98	59.756	ENSPNYG00000014125	tarbp2	95	58.841	Pundamilia_nyererei
ENSEBUG00000002377	tarbp2	98	60.550	ENSPNAG00000011128	tarbp2	95	59.633	Pygocentrus_nattereri
ENSEBUG00000002377	tarbp2	96	56.305	ENSRNOG00000042355	Tarbp2	95	54.885	Rattus_norvegicus
ENSEBUG00000002377	tarbp2	96	56.305	ENSRBIG00000027150	TARBP2	61	89.583	Rhinopithecus_bieti
ENSEBUG00000002377	tarbp2	96	56.305	ENSRROG00000044783	TARBP2	99	56.305	Rhinopithecus_roxellana
ENSEBUG00000002377	tarbp2	96	57.270	ENSSBOG00000027305	TARBP2	95	55.814	Saimiri_boliviensis_boliviensis
ENSEBUG00000002377	tarbp2	96	62.379	ENSSHAG00000007064	TARBP2	99	61.415	Sarcophilus_harrisii
ENSEBUG00000002377	tarbp2	98	58.651	ENSSFOG00015010784	tarbp2	95	58.358	Scleropages_formosus
ENSEBUG00000002377	tarbp2	98	57.784	ENSSMAG00000012769	tarbp2	95	56.886	Scophthalmus_maximus
ENSEBUG00000002377	tarbp2	98	59.271	ENSSDUG00000018818	tarbp2	95	58.537	Seriola_dumerili
ENSEBUG00000002377	tarbp2	98	62.420	ENSSLDG00000001835	tarbp2	96	61.465	Seriola_lalandi_dorsalis
ENSEBUG00000002377	tarbp2	75	60.000	ENSSARG00000001010	TARBP2	67	65.000	Sorex_araneus
ENSEBUG00000002377	tarbp2	63	87.500	ENSSPUG00000005895	TARBP2	65	84.314	Sphenodon_punctatus
ENSEBUG00000002377	tarbp2	98	58.841	ENSSPAG00000022797	tarbp2	95	57.927	Stegastes_partitus
ENSEBUG00000002377	tarbp2	96	56.869	ENSSSCG00000000276	TARBP2	99	56.598	Sus_scrofa
ENSEBUG00000002377	tarbp2	71	52.209	ENSTGUG00000017031	TARBP2	98	51.807	Taeniopygia_guttata
ENSEBUG00000002377	tarbp2	98	59.021	ENSTRUG00000014379	tarbp2	95	58.104	Takifugu_rubripes
ENSEBUG00000002377	tarbp2	98	58.410	ENSTNIG00000007065	tarbp2	95	57.492	Tetraodon_nigroviridis
ENSEBUG00000002377	tarbp2	50	57.396	ENSTBEG00000012751	-	54	57.396	Tupaia_belangeri
ENSEBUG00000002377	tarbp2	96	56.012	ENSTTRG00000017177	TARBP2	95	54.885	Tursiops_truncatus
ENSEBUG00000002377	tarbp2	96	55.718	ENSUAMG00000009011	TARBP2	95	54.885	Ursus_americanus
ENSEBUG00000002377	tarbp2	96	55.718	ENSUMAG00000010461	TARBP2	93	55.718	Ursus_maritimus
ENSEBUG00000002377	tarbp2	96	56.012	ENSVVUG00000028150	TARBP2	99	56.305	Vulpes_vulpes
ENSEBUG00000002377	tarbp2	99	57.522	ENSXETG00000012644	tarbp2	96	56.637	Xenopus_tropicalis
ENSEBUG00000002377	tarbp2	98	58.841	ENSXMAG00000017836	tarbp2	95	57.927	Xiphophorus_maculatus