EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000002449 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 200899 bases
Position: chrFYBX02000091.1:693127-894025
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000003614	ResIII	PF04851.15	9.4e-11	1	1
ENSEBUP00000003614	BRK	PF07533.16	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000003993	-	4098	-	ENSEBUP00000003614	1365 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000002449	-	96	62.709	ENSEBUG00000011442	-	88	61.822

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002449	-	89	68.548	ENSG00000080503	SMARCA2	99	90.476	Homo_sapiens
ENSEBUG00000002449	-	93	63.442	ENSAPOG00000002641	SMARCA2	87	62.390	Acanthochromis_polyacanthus
ENSEBUG00000002449	-	83	67.766	ENSAMEG00000012325	SMARCA2	95	66.156	Ailuropoda_melanoleuca
ENSEBUG00000002449	-	93	63.764	ENSACIG00000015607	SMARCA2	87	61.222	Amphilophus_citrinellus
ENSEBUG00000002449	-	93	63.158	ENSAOCG00000009647	-	84	62.971	Amphiprion_ocellaris
ENSEBUG00000002449	-	93	63.127	ENSAPEG00000007646	SMARCA2	85	62.470	Amphiprion_percula
ENSEBUG00000002449	-	95	62.855	ENSATEG00000006916	SMARCA2	86	61.119	Anabas_testudineus
ENSEBUG00000002449	-	88	61.946	ENSAPLG00000013873	SMARCA2	68	69.738	Anas_platyrhynchos
ENSEBUG00000002449	-	94	64.228	ENSACAG00000002423	SMARCA2	85	62.310	Anolis_carolinensis
ENSEBUG00000002449	-	95	63.862	ENSANAG00000026498	SMARCA2	86	62.698	Aotus_nancymaae
ENSEBUG00000002449	-	93	64.291	ENSACLG00000004248	SMARCA2	86	62.221	Astatotilapia_calliptera
ENSEBUG00000002449	-	93	62.719	ENSAMXG00000012404	smarca2	86	62.046	Astyanax_mexicanus
ENSEBUG00000002449	-	95	64.448	ENSBTAG00000007494	SMARCA2	86	63.097	Bos_taurus
ENSEBUG00000002449	-	95	63.794	ENSCJAG00000010710	SMARCA2	88	61.402	Callithrix_jacchus
ENSEBUG00000002449	-	95	64.322	ENSCAFG00000002013	SMARCA2	86	62.995	Canis_familiaris
ENSEBUG00000002449	-	82	68.193	ENSCAFG00020026802	SMARCA2	96	66.500	Canis_lupus_dingo
ENSEBUG00000002449	-	95	64.521	ENSCHIG00000025863	SMARCA2	86	63.597	Capra_hircus
ENSEBUG00000002449	-	89	68.574	ENSTSYG00000003858	SMARCA2	86	61.571	Carlito_syrichta
ENSEBUG00000002449	-	84	65.982	ENSCAPG00000002890	SMARCA2	87	60.795	Cavia_aperea
ENSEBUG00000002449	-	84	68.408	ENSCPOG00000005475	SMARCA2	86	62.410	Cavia_porcellus
ENSEBUG00000002449	-	95	63.511	ENSCCAG00000030636	SMARCA2	88	60.662	Cebus_capucinus
ENSEBUG00000002449	-	95	60.635	ENSCATG00000031470	SMARCA2	89	61.490	Cercocebus_atys
ENSEBUG00000002449	-	89	68.465	ENSCLAG00000014484	SMARCA2	86	62.116	Chinchilla_lanigera
ENSEBUG00000002449	-	83	68.266	ENSCSAG00000008650	SMARCA2	89	62.592	Chlorocebus_sabaeus
ENSEBUG00000002449	-	72	74.903	ENSCHOG00000004316	SMARCA2	77	59.309	Choloepus_hoffmanni
ENSEBUG00000002449	-	95	64.719	ENSCPBG00000025463	SMARCA2	88	64.042	Chrysemys_picta_bellii
ENSEBUG00000002449	-	84	68.548	ENSCANG00000039597	SMARCA2	88	61.728	Colobus_angolensis_palliatus
ENSEBUG00000002449	-	92	65.749	ENSCGRG00001002323	Smarca2	86	61.922	Cricetulus_griseus_chok1gshd
ENSEBUG00000002449	-	95	60.427	ENSCSEG00000019311	SMARCA2	89	58.333	Cynoglossus_semilaevis
ENSEBUG00000002449	-	72	65.968	ENSCVAG00000016571	SMARCA2	87	60.229	Cyprinodon_variegatus
ENSEBUG00000002449	-	99	60.788	ENSDARG00000008904	smarca2	87	60.873	Danio_rerio
ENSEBUG00000002449	-	95	63.948	ENSDNOG00000006402	SMARCA2	86	63.211	Dasypus_novemcinctus
ENSEBUG00000002449	-	84	68.588	ENSDORG00000014832	Smarca2	87	61.642	Dipodomys_ordii
ENSEBUG00000002449	-	85	54.605	FBgn0000212	brm	69	54.034	Drosophila_melanogaster
ENSEBUG00000002449	-	84	68.548	ENSEASG00005010312	SMARCA2	86	62.716	Equus_asinus_asinus
ENSEBUG00000002449	-	55	75.758	ENSEEUG00000015540	-	55	84.615	Erinaceus_europaeus
ENSEBUG00000002449	-	94	62.619	ENSELUG00000010318	smarca2	87	61.283	Esox_lucius
ENSEBUG00000002449	-	95	64.254	ENSFCAG00000001568	SMARCA2	86	62.761	Felis_catus
ENSEBUG00000002449	-	95	64.396	ENSFALG00000010416	SMARCA2	94	62.314	Ficedula_albicollis
ENSEBUG00000002449	-	92	66.773	ENSFDAG00000010502	SMARCA2	87	61.956	Fukomys_damarensis
ENSEBUG00000002449	-	95	62.373	ENSFHEG00000021250	SMARCA2	87	61.158	Fundulus_heteroclitus
ENSEBUG00000002449	-	95	62.372	ENSGMOG00000014229	SMARCA2	87	61.351	Gadus_morhua
ENSEBUG00000002449	-	95	64.637	ENSGALG00000010164	SMARCA2	91	61.859	Gallus_gallus
ENSEBUG00000002449	-	95	59.197	ENSGAFG00000001164	SMARCA2	82	68.868	Gambusia_affinis
ENSEBUG00000002449	-	95	62.934	ENSGACG00000014488	SMARCA2	87	61.040	Gasterosteus_aculeatus
ENSEBUG00000002449	-	95	64.887	ENSGAGG00000024412	SMARCA2	86	62.724	Gopherus_agassizii
ENSEBUG00000002449	-	91	63.719	ENSGGOG00000000513	SMARCA2	79	67.165	Gorilla_gorilla
ENSEBUG00000002449	-	93	64.366	ENSHBUG00000006691	SMARCA2	86	61.915	Haplochromis_burtoni
ENSEBUG00000002449	-	89	68.408	ENSHGLG00000005215	SMARCA2	86	60.955	Heterocephalus_glaber_female
ENSEBUG00000002449	-	95	64.645	ENSHGLG00100010496	SMARCA2	86	63.154	Heterocephalus_glaber_male
ENSEBUG00000002449	-	86	58.272	ENSHCOG00000015348	-	74	64.849	Hippocampus_comes
ENSEBUG00000002449	-	98	60.764	ENSIPUG00000011060	smarca2	88	60.750	Ictalurus_punctatus
ENSEBUG00000002449	-	89	68.491	ENSSTOG00000006812	SMARCA2	87	61.775	Ictidomys_tridecemlineatus
ENSEBUG00000002449	-	88	66.746	ENSJJAG00000010867	Smarca2	87	62.155	Jaculus_jaculus
ENSEBUG00000002449	-	93	62.135	ENSKMAG00000015844	-	85	60.171	Kryptolebias_marmoratus
ENSEBUG00000002449	-	95	61.702	ENSLOCG00000011499	smarca2	87	60.504	Lepisosteus_oculatus
ENSEBUG00000002449	-	95	63.742	ENSLAFG00000014061	SMARCA2	86	62.714	Loxodonta_africana
ENSEBUG00000002449	-	86	66.693	ENSMFAG00000003814	SMARCA2	86	62.708	Macaca_fascicularis
ENSEBUG00000002449	-	95	61.278	ENSMMUG00000015279	SMARCA2	87	62.366	Macaca_mulatta
ENSEBUG00000002449	-	95	64.129	ENSMNEG00000041069	SMARCA2	85	63.974	Macaca_nemestrina
ENSEBUG00000002449	-	87	69.088	ENSMLEG00000027418	SMARCA2	82	67.440	Mandrillus_leucophaeus
ENSEBUG00000002449	-	95	62.195	ENSMAMG00000003056	SMARCA2	88	59.239	Mastacembelus_armatus
ENSEBUG00000002449	-	93	64.291	ENSMZEG00005020709	SMARCA2	89	61.057	Maylandia_zebra
ENSEBUG00000002449	-	74	59.151	ENSMGAG00000005160	-	87	58.278	Meleagris_gallopavo
ENSEBUG00000002449	-	95	64.161	ENSMICG00000005162	SMARCA2	86	62.995	Microcebus_murinus
ENSEBUG00000002449	-	91	65.152	ENSMOCG00000001611	Smarca2	86	62.222	Microtus_ochrogaster
ENSEBUG00000002449	-	93	62.611	ENSMMOG00000014196	SMARCA2	85	61.527	Mola_mola
ENSEBUG00000002449	-	95	64.556	ENSMODG00000003578	SMARCA2	86	63.128	Monodelphis_domestica
ENSEBUG00000002449	-	95	61.898	ENSMALG00000009611	SMARCA2	89	58.922	Monopterus_albus
ENSEBUG00000002449	-	90	65.187	MGP_CAROLIEiJ_G0022841	Smarca2	79	64.984	Mus_caroli
ENSEBUG00000002449	-	90	64.943	ENSMUSG00000024921	Smarca2	73	80.240	Mus_musculus
ENSEBUG00000002449	-	90	65.019	MGP_PahariEiJ_G0014334	Smarca2	78	65.542	Mus_pahari
ENSEBUG00000002449	-	90	64.943	MGP_SPRETEiJ_G0023759	Smarca2	90	64.680	Mus_spretus
ENSEBUG00000002449	-	88	65.474	ENSMPUG00000005171	SMARCA2	90	66.076	Mustela_putorius_furo
ENSEBUG00000002449	-	95	61.099	ENSMLUG00000002342	SMARCA2	78	63.466	Myotis_lucifugus
ENSEBUG00000002449	-	95	62.779	ENSNGAG00000000108	Smarca2	86	61.763	Nannospalax_galili
ENSEBUG00000002449	-	85	58.961	ENSNBRG00000017998	SMARCA2	89	81.579	Neolamprologus_brichardi
ENSEBUG00000002449	-	84	67.635	ENSNLEG00000008575	SMARCA2	78	66.546	Nomascus_leucogenys
ENSEBUG00000002449	-	93	59.661	ENSMEUG00000009812	SMARCA2	84	58.450	Notamacropus_eugenii
ENSEBUG00000002449	-	88	64.179	ENSOPRG00000013474	SMARCA2	86	60.615	Ochotona_princeps
ENSEBUG00000002449	-	84	68.465	ENSODEG00000005452	SMARCA2	86	61.769	Octodon_degus
ENSEBUG00000002449	-	93	62.874	ENSONIG00000014163	SMARCA2	81	63.035	Oreochromis_niloticus
ENSEBUG00000002449	-	51	69.519	ENSOANG00000008299	-	95	68.617	Ornithorhynchus_anatinus
ENSEBUG00000002449	-	89	66.119	ENSOCUG00000006320	SMARCA2	86	62.081	Oryctolagus_cuniculus
ENSEBUG00000002449	-	96	60.765	ENSORLG00000020820	SMARCA2	88	60.140	Oryzias_latipes
ENSEBUG00000002449	-	96	61.320	ENSORLG00015006289	SMARCA2	86	60.337	Oryzias_latipes_hsok
ENSEBUG00000002449	-	93	63.284	ENSOMEG00000009736	-	88	60.809	Oryzias_melastigma
ENSEBUG00000002449	-	84	68.631	ENSOGAG00000017053	SMARCA2	74	67.771	Otolemur_garnettii
ENSEBUG00000002449	-	84	68.076	ENSOARG00000013265	SMARCA2	86	62.626	Ovis_aries
ENSEBUG00000002449	-	95	63.820	ENSPPAG00000038717	SMARCA2	83	67.884	Pan_paniscus
ENSEBUG00000002449	-	95	64.327	ENSPPRG00000001879	SMARCA2	86	62.832	Panthera_pardus
ENSEBUG00000002449	-	95	63.796	ENSPTRG00000051168	SMARCA2	87	62.101	Pan_troglodytes
ENSEBUG00000002449	-	84	66.086	ENSPANG00000025121	SMARCA2	86	61.115	Papio_anubis
ENSEBUG00000002449	-	98	62.000	ENSPKIG00000018469	-	86	61.801	Paramormyrops_kingsleyae
ENSEBUG00000002449	-	95	64.727	ENSPSIG00000006284	SMARCA2	86	62.607	Pelodiscus_sinensis
ENSEBUG00000002449	-	91	62.992	ENSPMGG00000013696	-	83	62.598	Periophthalmus_magnuspinnatus
ENSEBUG00000002449	-	91	65.294	ENSPEMG00000019821	Smarca2	86	62.393	Peromyscus_maniculatus_bairdii
ENSEBUG00000002449	-	94	61.951	ENSPMAG00000005337	-	89	60.041	Petromyzon_marinus
ENSEBUG00000002449	-	95	64.919	ENSPCIG00000015658	SMARCA2	86	63.200	Phascolarctos_cinereus
ENSEBUG00000002449	-	95	61.655	ENSPFOG00000001856	SMARCA2	87	59.789	Poecilia_formosa
ENSEBUG00000002449	-	95	61.302	ENSPLAG00000017829	SMARCA2	86	60.100	Poecilia_latipinna
ENSEBUG00000002449	-	95	61.417	ENSPMEG00000001815	-	87	59.789	Poecilia_mexicana
ENSEBUG00000002449	-	95	61.456	ENSPREG00000013800	SMARCA2	86	58.640	Poecilia_reticulata
ENSEBUG00000002449	-	89	68.106	ENSPPYG00000019258	SMARCA2	86	62.123	Pongo_abelii
ENSEBUG00000002449	-	69	79.412	ENSPCAG00000016969	SMARCA2	62	79.412	Procavia_capensis
ENSEBUG00000002449	-	84	68.377	ENSPCOG00000025709	SMARCA2	86	62.737	Propithecus_coquereli
ENSEBUG00000002449	-	88	77.528	ENSPVAG00000000901	SMARCA2	84	70.370	Pteropus_vampyrus
ENSEBUG00000002449	-	93	61.550	ENSPNYG00000004533	SMARCA2	84	60.132	Pundamilia_nyererei
ENSEBUG00000002449	-	93	62.628	ENSPNAG00000014635	smarca2	85	61.957	Pygocentrus_nattereri
ENSEBUG00000002449	-	93	63.717	ENSRNOG00000011931	Smarca2	87	61.290	Rattus_norvegicus
ENSEBUG00000002449	-	84	68.574	ENSRBIG00000038618	SMARCA2	89	67.574	Rhinopithecus_bieti
ENSEBUG00000002449	-	95	60.735	ENSRROG00000019271	SMARCA2	89	62.187	Rhinopithecus_roxellana
ENSEBUG00000002449	-	95	63.084	ENSSBOG00000034827	SMARCA2	86	61.953	Saimiri_boliviensis_boliviensis
ENSEBUG00000002449	-	95	64.488	ENSSHAG00000007884	SMARCA2	87	62.527	Sarcophilus_harrisii
ENSEBUG00000002449	-	88	62.736	ENSSFOG00015014870	SMARCA2	87	61.792	Scleropages_formosus
ENSEBUG00000002449	-	94	63.232	ENSSMAG00000013707	SMARCA2	85	61.943	Scophthalmus_maximus
ENSEBUG00000002449	-	93	63.241	ENSSDUG00000008852	-	83	61.828	Seriola_dumerili
ENSEBUG00000002449	-	93	62.444	ENSSLDG00000025449	SMARCA2	83	60.701	Seriola_lalandi_dorsalis
ENSEBUG00000002449	-	79	77.528	ENSSARG00000007888	SMARCA2	75	70.370	Sorex_araneus
ENSEBUG00000002449	-	95	62.454	ENSSPUG00000001629	SMARCA2	89	60.770	Sphenodon_punctatus
ENSEBUG00000002449	-	95	62.518	ENSSPAG00000020091	-	88	60.650	Stegastes_partitus
ENSEBUG00000002449	-	95	64.663	ENSSSCG00000005232	SMARCA2	86	63.307	Sus_scrofa
ENSEBUG00000002449	-	95	64.396	ENSTGUG00000005460	SMARCA2	89	61.315	Taeniopygia_guttata
ENSEBUG00000002449	-	94	62.274	ENSTRUG00000015619	SMARCA2	89	59.564	Takifugu_rubripes
ENSEBUG00000002449	-	59	81.081	ENSTBEG00000008767	SMARCA2	58	81.081	Tupaia_belangeri
ENSEBUG00000002449	-	95	63.827	ENSTTRG00000002033	SMARCA2	86	62.491	Tursiops_truncatus
ENSEBUG00000002449	-	89	63.137	ENSUAMG00000024701	SMARCA2	88	62.891	Ursus_americanus
ENSEBUG00000002449	-	89	60.703	ENSVPAG00000001204	SMARCA2	87	59.918	Vicugna_pacos
ENSEBUG00000002449	-	81	68.793	ENSVVUG00000004598	SMARCA2	97	66.892	Vulpes_vulpes
ENSEBUG00000002449	-	99	60.546	ENSXETG00000015299	smarca2	77	64.432	Xenopus_tropicalis
ENSEBUG00000002449	-	89	59.660	ENSXCOG00000011073	SMARCA2	89	59.024	Xiphophorus_couchianus
ENSEBUG00000002449	-	95	61.325	ENSXMAG00000015611	SMARCA2	86	59.236	Xiphophorus_maculatus