EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000002471 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Plus strand
Length
282630 bases
Position
chrFYBX02009601.1:2834519-3117148
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000003387RRM_1PF00076.223.6e-5113
ENSEBUP00000003387RRM_1PF00076.223.6e-5123
ENSEBUP00000003387RRM_1PF00076.223.6e-5133
ENSEBUP00000003407RRM_1PF00076.223.2e-3112
ENSEBUP00000003407RRM_1PF00076.223.2e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000003777-1922-ENSEBUP00000003407483 (aa)--
ENSEBUT00000003756-1668-ENSEBUP00000003387555 (aa)--
Gene Model
Click here to download ENSEBUG00000002471's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002471's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000002471-7845.361ENSEBUG00000011955CELF510045.220
ENSEBUG00000002471-6040.741ENSEBUG00000000352-7940.741
ENSEBUG00000002471-7842.507ENSEBUG00000009548CELF59542.234
ENSEBUG00000002471-7961.184ENSEBUG00000007835-9360.938
ENSEBUG00000002471-7852.227ENSEBUG00000008128-9253.347
ENSEBUG00000002471-8163.147ENSEBUG00000014743-10063.808
ENSEBUG00000002471-5341.463ENSEBUG00000008179-7141.463
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000002471-8666.857ENSG00000048740CELF210069.293Homo_sapiens
ENSEBUG00000002471-8172.949ENSAPOG00000017441-10068.443Acanthochromis_polyacanthus
ENSEBUG00000002471-8665.589ENSAPOG00000008530-10065.714Acanthochromis_polyacanthus
ENSEBUG00000002471-8368.966ENSAMEG00000004946CELF29769.168Ailuropoda_melanoleuca
ENSEBUG00000002471-8163.395ENSACIG00000004318-10065.503Amphilophus_citrinellus
ENSEBUG00000002471-8165.164ENSACIG00000019405-10064.916Amphilophus_citrinellus
ENSEBUG00000002471-5463.429ENSAOCG00000022420-7963.714Amphiprion_ocellaris
ENSEBUG00000002471-8665.589ENSAOCG00000022110-10065.714Amphiprion_ocellaris
ENSEBUG00000002471-8172.566ENSAPEG00000017360-10071.586Amphiprion_percula
ENSEBUG00000002471-8665.589ENSAPEG00000003362-10065.714Amphiprion_percula
ENSEBUG00000002471-8668.283ENSATEG00000021942-10071.183Anabas_testudineus
ENSEBUG00000002471-8172.247ENSATEG00000017169-10072.026Anabas_testudineus
ENSEBUG00000002471-8168.852ENSAPLG00000010064CELF29570.143Anas_platyrhynchos
ENSEBUG00000002471-7866.835ENSACAG00000007661CELF210068.434Anolis_carolinensis
ENSEBUG00000002471-8667.630ENSANAG00000024646CELF210068.846Aotus_nancymaae
ENSEBUG00000002471-8169.877ENSACLG00000013768-10070.082Astatotilapia_calliptera
ENSEBUG00000002471-8664.504ENSACLG00000003085-10068.511Astatotilapia_calliptera
ENSEBUG00000002471-8170.940ENSAMXG00000005933celf210070.362Astyanax_mexicanus
ENSEBUG00000002471-8667.113ENSBTAG00000008937CELF210070.021Bos_taurus
ENSEBUG00000002471-8666.857ENSCJAG00000020663CELF210068.061Callithrix_jacchus
ENSEBUG00000002471-8168.293ENSCAFG00000004973CELF210069.168Canis_familiaris
ENSEBUG00000002471-8667.630ENSCAFG00020005823CELF210068.846Canis_lupus_dingo
ENSEBUG00000002471-8666.857ENSCHIG00000015379CELF210068.061Capra_hircus
ENSEBUG00000002471-7867.972ENSTSYG00000005118CELF29267.195Carlito_syrichta
ENSEBUG00000002471-8655.253ENSTSYG00000025428-9954.580Carlito_syrichta
ENSEBUG00000002471-8351.606ENSCAPG00000014106CELF29853.707Cavia_aperea
ENSEBUG00000002471-8667.630ENSCPOG00000012567CELF210069.293Cavia_porcellus
ENSEBUG00000002471-8665.363ENSCCAG00000020159CELF210069.168Cebus_capucinus
ENSEBUG00000002471-8667.437ENSCATG00000032144CELF210069.293Cercocebus_atys
ENSEBUG00000002471-8368.136ENSCLAG00000010311CELF210069.293Chinchilla_lanigera
ENSEBUG00000002471-8666.667ENSCSAG00000013405CELF210067.871Chlorocebus_sabaeus
ENSEBUG00000002471-7066.522ENSCHOG00000002945CELF28081.875Choloepus_hoffmanni
ENSEBUG00000002471-8171.087ENSCPBG00000027840CELF210068.600Chrysemys_picta_bellii
ENSEBUG00000002471-8664.607ENSCANG00000033443CELF29969.293Colobus_angolensis_palliatus
ENSEBUG00000002471-8267.944ENSCGRG00001015058Celf29669.939Cricetulus_griseus_chok1gshd
ENSEBUG00000002471-8267.944ENSCGRG00000011178Celf210068.966Cricetulus_griseus_crigri
ENSEBUG00000002471-8166.955ENSCSEG00000015335-10068.008Cynoglossus_semilaevis
ENSEBUG00000002471-8169.610ENSCSEG00000003342-10070.226Cynoglossus_semilaevis
ENSEBUG00000002471-8665.900ENSCVAG00000009088-10069.180Cyprinodon_variegatus
ENSEBUG00000002471-8668.485ENSCVAG00000004383-10069.530Cyprinodon_variegatus
ENSEBUG00000002471-8171.930ENSDARG00000002131celf29870.732Danio_rerio
ENSEBUG00000002471-8175.556ENSDNOG00000000252CELF210075.556Dasypus_novemcinctus
ENSEBUG00000002471-8268.145ENSDORG00000006455Celf210069.168Dipodomys_ordii
ENSEBUG00000002471-7268.254ENSETEG00000008414CELF27868.254Echinops_telfairi
ENSEBUG00000002471-8666.857ENSEASG00005019262CELF210068.061Equus_asinus_asinus
ENSEBUG00000002471-8175.556ENSECAG00000006649CELF210069.168Equus_caballus
ENSEBUG00000002471-8165.731ENSEEUG00000005658CELF28282.609Erinaceus_europaeus
ENSEBUG00000002471-8663.947ENSELUG00000008279-10063.567Esox_lucius
ENSEBUG00000002471-8670.408ENSELUG00000005848-10070.000Esox_lucius
ENSEBUG00000002471-8667.823ENSFCAG00000004738CELF210069.293Felis_catus
ENSEBUG00000002471-8168.852ENSFALG00000001873CELF29470.143Ficedula_albicollis
ENSEBUG00000002471-8268.145ENSFDAG00000015074CELF210069.293Fukomys_damarensis
ENSEBUG00000002471-8666.922ENSFHEG00000007136-10068.041Fundulus_heteroclitus
ENSEBUG00000002471-8668.367ENSFHEG00000010537-10069.421Fundulus_heteroclitus
ENSEBUG00000002471-5058.647ENSGMOG00000008983-6159.603Gadus_morhua
ENSEBUG00000002471-8170.065ENSGMOG00000010163-9170.614Gadus_morhua
ENSEBUG00000002471-8566.798ENSGALG00000034590CELF210070.143Gallus_gallus
ENSEBUG00000002471-8170.961ENSGAFG00000004951-10070.287Gambusia_affinis
ENSEBUG00000002471-8665.201ENSGAFG00000015151-10069.492Gambusia_affinis
ENSEBUG00000002471-8566.601ENSGAGG00000023497CELF29667.843Gopherus_agassizii
ENSEBUG00000002471-8565.825ENSGGOG00000009330CELF29969.293Gorilla_gorilla
ENSEBUG00000002471-8168.511ENSHBUG00000005718-10068.511Haplochromis_burtoni
ENSEBUG00000002471-8667.557ENSHBUG00000005058-10067.748Haplochromis_burtoni
ENSEBUG00000002471-8268.145ENSHGLG00000017139CELF210069.293Heterocephalus_glaber_female
ENSEBUG00000002471-8168.852ENSHGLG00100010282CELF210069.293Heterocephalus_glaber_male
ENSEBUG00000002471-8664.394ENSHCOG00000011353-10064.205Hippocampus_comes
ENSEBUG00000002471-8170.961ENSHCOG00000005953-10070.524Hippocampus_comes
ENSEBUG00000002471-8665.543ENSIPUG00000008622celf210068.283Ictalurus_punctatus
ENSEBUG00000002471-8268.145ENSSTOG00000001564CELF210070.143Ictidomys_tridecemlineatus
ENSEBUG00000002471-8467.059ENSJJAG00000011472Celf210070.143Jaculus_jaculus
ENSEBUG00000002471-8668.081ENSKMAG00000014795-10070.064Kryptolebias_marmoratus
ENSEBUG00000002471-8664.972ENSLBEG00000010618-10064.540Labrus_bergylta
ENSEBUG00000002471-8665.392ENSLACG00000009779CELF29966.985Latimeria_chalumnae
ENSEBUG00000002471-8167.814ENSLOCG00000015690celf29469.636Lepisosteus_oculatus
ENSEBUG00000002471-8268.145ENSLAFG00000013612CELF29469.416Loxodonta_africana
ENSEBUG00000002471-8665.177ENSMFAG00000033084CELF210069.293Macaca_fascicularis
ENSEBUG00000002471-8665.177ENSMMUG00000037449CELF29869.877Macaca_mulatta
ENSEBUG00000002471-8364.950ENSMNEG00000045450CELF29966.534Macaca_nemestrina
ENSEBUG00000002471-7867.972ENSMLEG00000040420CELF210066.219Mandrillus_leucophaeus
ENSEBUG00000002471-7688.722ENSMAMG00000017876-10070.287Mastacembelus_armatus
ENSEBUG00000002471-8666.157ENSMAMG00000023208-10067.480Mastacembelus_armatus
ENSEBUG00000002471-8664.504ENSMZEG00005006950-10068.511Maylandia_zebra
ENSEBUG00000002471-8668.081ENSMZEG00005021669-10069.121Maylandia_zebra
ENSEBUG00000002471-8168.303ENSMGAG00000004551CELF210069.371Meleagris_gallopavo
ENSEBUG00000002471-7869.343ENSMAUG00000009783Celf29168.029Mesocricetus_auratus
ENSEBUG00000002471-8667.630ENSMICG00000007867CELF210069.293Microcebus_murinus
ENSEBUG00000002471-8268.145ENSMOCG00000004765Celf210069.293Microtus_ochrogaster
ENSEBUG00000002471-8169.672ENSMMOG00000006702-10069.877Mola_mola
ENSEBUG00000002471-8167.842ENSMMOG00000012104-10067.635Mola_mola
ENSEBUG00000002471-7866.585ENSMODG00000016763CELF210068.137Monodelphis_domestica
ENSEBUG00000002471-8669.877ENSMALG00000000961-10070.082Monopterus_albus
ENSEBUG00000002471-8665.267ENSMALG00000011132-10069.510Monopterus_albus
ENSEBUG00000002471-8267.944MGP_CAROLIEiJ_G0023161Celf210079.851Mus_caroli
ENSEBUG00000002471-8267.944ENSMUSG00000002107Celf210079.851Mus_musculus
ENSEBUG00000002471-8267.944MGP_PahariEiJ_G0019221Celf210079.851Mus_pahari
ENSEBUG00000002471-8267.944MGP_SPRETEiJ_G0024079Celf210079.851Mus_spretus
ENSEBUG00000002471-8268.145ENSMPUG00000016406CELF29769.416Mustela_putorius_furo
ENSEBUG00000002471-8368.273ENSMLUG00000005791CELF29769.200Myotis_lucifugus
ENSEBUG00000002471-8262.903ENSNGAG00000021158Celf29862.525Nannospalax_galili
ENSEBUG00000002471-8665.251ENSNBRG00000012818-10070.082Neolamprologus_brichardi
ENSEBUG00000002471-8664.504ENSNBRG00000000322-10068.062Neolamprologus_brichardi
ENSEBUG00000002471-8565.825ENSNLEG00000011968CELF29968.526Nomascus_leucogenys
ENSEBUG00000002471-8160.619ENSMEUG00000015276CELF29960.797Notamacropus_eugenii
ENSEBUG00000002471-8166.535ENSOPRG00000011502CELF29966.601Ochotona_princeps
ENSEBUG00000002471-8268.145ENSODEG00000000887CELF210070.143Octodon_degus
ENSEBUG00000002471-8664.818ENSONIG00000008624-10065.201Oreochromis_niloticus
ENSEBUG00000002471-8169.450ENSONIG00000017931-9369.246Oreochromis_niloticus
ENSEBUG00000002471-5072.832ENSOANG00000015432-7373.188Ornithorhynchus_anatinus
ENSEBUG00000002471-8268.145ENSOCUG00000004961CELF29469.416Oryctolagus_cuniculus
ENSEBUG00000002471-8172.052ENSORLG00000017111-10067.045Oryzias_latipes
ENSEBUG00000002471-8664.299ENSORLG00000003894-10065.451Oryzias_latipes
ENSEBUG00000002471-8664.176ENSORLG00020015261-10065.326Oryzias_latipes_hni
ENSEBUG00000002471-8669.293ENSORLG00020006562-10069.450Oryzias_latipes_hni
ENSEBUG00000002471-8664.299ENSORLG00015008084-10065.451Oryzias_latipes_hsok
ENSEBUG00000002471-8172.052ENSORLG00015006221-10067.045Oryzias_latipes_hsok
ENSEBUG00000002471-8667.235ENSOMEG00000023599-10067.235Oryzias_melastigma
ENSEBUG00000002471-9262.007ENSOMEG00000000277-10065.076Oryzias_melastigma
ENSEBUG00000002471-7867.830ENSOGAG00000005541CELF210069.403Otolemur_garnettii
ENSEBUG00000002471-7868.608ENSOARG00000014052CELF210067.848Ovis_aries
ENSEBUG00000002471-8565.825ENSPPAG00000029170CELF210069.293Pan_paniscus
ENSEBUG00000002471-8665.918ENSPPRG00000021517CELF210069.293Panthera_pardus
ENSEBUG00000002471-7867.261ENSPTIG00000019418CELF29366.147Panthera_tigris_altaica
ENSEBUG00000002471-8666.667ENSPTRG00000002284CELF210069.293Pan_troglodytes
ENSEBUG00000002471-8665.177ENSPANG00000023401CELF29870.143Papio_anubis
ENSEBUG00000002471-8866.171ENSPKIG00000025033-10068.163Paramormyrops_kingsleyae
ENSEBUG00000002471-70100.000ENSPKIG00000025513-10057.778Paramormyrops_kingsleyae
ENSEBUG00000002471-8666.794ENSPSIG00000013861CELF210068.000Pelodiscus_sinensis
ENSEBUG00000002471-8172.907ENSPMGG00000005719-10072.687Periophthalmus_magnuspinnatus
ENSEBUG00000002471-8164.549ENSPMGG00000014571-9567.623Periophthalmus_magnuspinnatus
ENSEBUG00000002471-8268.145ENSPEMG00000017244Celf210069.293Peromyscus_maniculatus_bairdii
ENSEBUG00000002471-7449.043ENSPMAG00000006638-9949.043Petromyzon_marinus
ENSEBUG00000002471-7162.527ENSPFOG00000012840-10064.026Poecilia_formosa
ENSEBUG00000002471-8666.092ENSPFOG00000013076-10066.092Poecilia_formosa
ENSEBUG00000002471-7863.246ENSPLAG00000020446-9957.367Poecilia_latipinna
ENSEBUG00000002471-8666.284ENSPLAG00000021601-10066.284Poecilia_latipinna
ENSEBUG00000002471-8667.614ENSPMEG00000013036-10069.450Poecilia_mexicana
ENSEBUG00000002471-8665.966ENSPMEG00000007082-10065.966Poecilia_mexicana
ENSEBUG00000002471-8667.235ENSPREG00000018002-10070.265Poecilia_reticulata
ENSEBUG00000002471-8665.774ENSPREG00000007795-10067.708Poecilia_reticulata
ENSEBUG00000002471-8267.331ENSPPYG00000002083CELF29768.588Pongo_abelii
ENSEBUG00000002471-8161.067ENSPCAG00000010882CELF29761.341Procavia_capensis
ENSEBUG00000002471-8670.661ENSPCOG00000026161CELF210069.854Propithecus_coquereli
ENSEBUG00000002471-7378.641ENSPVAG00000003294CELF25086.000Pteropus_vampyrus
ENSEBUG00000002471-8664.504ENSPNYG00000002565-10068.511Pundamilia_nyererei
ENSEBUG00000002471-8668.081ENSPNYG00000015832-10069.121Pundamilia_nyererei
ENSEBUG00000002471-8667.562ENSPNAG00000006639celf210068.699Pygocentrus_nattereri
ENSEBUG00000002471-8667.437ENSRNOG00000023661Celf210068.654Rattus_norvegicus
ENSEBUG00000002471-8367.327ENSRBIG00000042443CELF210069.293Rhinopithecus_bieti
ENSEBUG00000002471-8663.296ENSRROG00000044478CELF29767.879Rhinopithecus_roxellana
ENSEBUG00000002471-8565.825ENSSBOG00000028844CELF29870.143Saimiri_boliviensis_boliviensis
ENSEBUG00000002471-8170.625ENSSFOG00015023981-9869.792Scleropages_formosus
ENSEBUG00000002471-8667.347ENSSFOG00015023817-10070.110Scleropages_formosus
ENSEBUG00000002471-8665.259ENSSMAG00000008985-10064.286Scophthalmus_maximus
ENSEBUG00000002471-8172.867ENSSMAG00000008925-10068.507Scophthalmus_maximus
ENSEBUG00000002471-8172.506ENSSDUG00000022515-10072.284Seriola_dumerili
ENSEBUG00000002471-8169.877ENSSDUG00000015603-10070.287Seriola_dumerili
ENSEBUG00000002471-8172.185ENSSLDG00000010918-10071.965Seriola_lalandi_dorsalis
ENSEBUG00000002471-8168.238ENSSLDG00000001157-10068.648Seriola_lalandi_dorsalis
ENSEBUG00000002471-8163.934ENSSPUG00000018833CELF210065.235Sphenodon_punctatus
ENSEBUG00000002471-8665.714ENSSPAG00000005647-10063.168Stegastes_partitus
ENSEBUG00000002471-7768.162ENSSPAG00000007458-9966.940Stegastes_partitus
ENSEBUG00000002471-8374.837ENSSSCG00000011121-10070.348Sus_scrofa
ENSEBUG00000002471-8168.293ENSTGUG00000002136CELF29969.574Taeniopygia_guttata
ENSEBUG00000002471-8170.742ENSTRUG00000010147-9271.903Takifugu_rubripes
ENSEBUG00000002471-8667.113ENSTRUG00000016905-10066.348Takifugu_rubripes
ENSEBUG00000002471-8166.463ENSTNIG00000007201-9867.480Tetraodon_nigroviridis
ENSEBUG00000002471-8168.763ENSTNIG00000016009-9968.219Tetraodon_nigroviridis
ENSEBUG00000002471-8165.873ENSTBEG00000007939CELF28159.277Tupaia_belangeri
ENSEBUG00000002471-8159.802ENSTTRG00000014665CELF29959.881Tursiops_truncatus
ENSEBUG00000002471-8367.807ENSUMAG00000012780CELF29865.517Ursus_maritimus
ENSEBUG00000002471-7857.208ENSVPAG00000009360CELF210059.276Vicugna_pacos
ENSEBUG00000002471-8267.331ENSVVUG00000006430CELF210069.293Vulpes_vulpes
ENSEBUG00000002471-8366.019ENSXETG00000021992celf210068.257Xenopus_tropicalis
ENSEBUG00000002471-8659.082ENSXCOG00000011871-10060.446Xiphophorus_couchianus
ENSEBUG00000002471-8665.583ENSXMAG00000016859-10068.058Xiphophorus_maculatus
ENSEBUG00000002471-8667.235ENSXMAG00000024223-10067.992Xiphophorus_maculatus

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