EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000002842 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 48318 bases
Position: chrFYBX02010804.1:958050-1006367
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004012	RNA_pol_Rpb6	PF01192.22	5.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004424	-	348	-	ENSEBUP00000004012	115 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000002842	-	73	56.471	ENSEBUG00000008509	polr2f	61	76.271

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002842	-	90	64.078	ENSG00000100142	POLR2F	77	70.930	Homo_sapiens
ENSEBUG00000002842	-	90	65.385	ENSAPOG00000002902	polr2f	77	68.367	Acanthochromis_polyacanthus
ENSEBUG00000002842	-	90	64.078	ENSAMEG00000010331	POLR2F	72	71.429	Ailuropoda_melanoleuca
ENSEBUG00000002842	-	90	65.385	ENSACIG00000000923	polr2f	77	68.367	Amphilophus_citrinellus
ENSEBUG00000002842	-	90	64.423	ENSAOCG00000003182	polr2f	77	67.347	Amphiprion_ocellaris
ENSEBUG00000002842	-	90	64.423	ENSAPEG00000012999	polr2f	77	67.347	Amphiprion_percula
ENSEBUG00000002842	-	90	65.385	ENSATEG00000008929	polr2f	77	68.367	Anabas_testudineus
ENSEBUG00000002842	-	87	65.000	ENSAPLG00000015235	POLR2F	73	71.429	Anas_platyrhynchos
ENSEBUG00000002842	-	90	64.423	ENSACAG00000015288	POLR2F	72	72.527	Anolis_carolinensis
ENSEBUG00000002842	-	90	64.078	ENSANAG00000020840	POLR2F	75	71.429	Aotus_nancymaae
ENSEBUG00000002842	-	90	65.385	ENSACLG00000016129	polr2f	77	68.367	Astatotilapia_calliptera
ENSEBUG00000002842	-	90	63.462	ENSAMXG00000012812	polr2f	77	66.327	Astyanax_mexicanus
ENSEBUG00000002842	-	90	63.462	ENSBTAG00000004820	POLR2F	72	71.429	Bos_taurus
ENSEBUG00000002842	-	67	72.727	WBGene00007355	rpb-6	56	72.727	Caenorhabditis_elegans
ENSEBUG00000002842	-	90	64.078	ENSCJAG00000048241	POLR2F	75	71.429	Callithrix_jacchus
ENSEBUG00000002842	-	90	64.078	ENSCAFG00000001437	POLR2F	72	71.429	Canis_familiaris
ENSEBUG00000002842	-	90	63.462	ENSCHIG00000012907	POLR2F	72	71.429	Capra_hircus
ENSEBUG00000002842	-	90	63.462	ENSTSYG00000008187	POLR2F	72	71.429	Carlito_syrichta
ENSEBUG00000002842	-	90	64.078	ENSCAPG00000013419	POLR2F	71	71.429	Cavia_aperea
ENSEBUG00000002842	-	90	63.462	ENSCPOG00000034094	POLR2F	72	71.429	Cavia_porcellus
ENSEBUG00000002842	-	90	63.462	ENSCCAG00000036489	POLR2F	72	71.429	Cebus_capucinus
ENSEBUG00000002842	-	90	64.078	ENSCATG00000041014	POLR2F	75	71.429	Cercocebus_atys
ENSEBUG00000002842	-	90	63.462	ENSCLAG00000017167	POLR2F	72	71.429	Chinchilla_lanigera
ENSEBUG00000002842	-	90	63.462	ENSCSAG00000006862	POLR2F	72	71.429	Chlorocebus_sabaeus
ENSEBUG00000002842	-	86	65.347	ENSCING00000019359	-	60	72.093	Ciona_intestinalis
ENSEBUG00000002842	-	90	64.078	ENSCANG00000041884	POLR2F	75	71.429	Colobus_angolensis_palliatus
ENSEBUG00000002842	-	90	63.462	ENSCGRG00001023541	POLR2F	72	71.429	Cricetulus_griseus_chok1gshd
ENSEBUG00000002842	-	90	63.462	ENSCGRG00000011921	POLR2F	72	71.429	Cricetulus_griseus_crigri
ENSEBUG00000002842	-	90	64.423	ENSCSEG00000006848	polr2f	77	67.347	Cynoglossus_semilaevis
ENSEBUG00000002842	-	90	65.385	ENSCVAG00000010437	polr2f	77	68.367	Cyprinodon_variegatus
ENSEBUG00000002842	-	90	63.462	ENSDARG00000036625	polr2f	77	66.327	Danio_rerio
ENSEBUG00000002842	-	90	63.462	ENSDNOG00000005884	POLR2F	72	71.429	Dasypus_novemcinctus
ENSEBUG00000002842	-	90	63.462	ENSDORG00000024789	Polr2f	72	71.429	Dipodomys_ordii
ENSEBUG00000002842	-	86	57.843	FBgn0003275	RpII18	62	69.136	Drosophila_melanogaster
ENSEBUG00000002842	-	90	60.577	ENSEEUG00000011014	POLR2F	71	68.132	Erinaceus_europaeus
ENSEBUG00000002842	-	90	64.423	ENSELUG00000000319	polr2f	77	67.347	Esox_lucius
ENSEBUG00000002842	-	90	64.078	ENSFCAG00000002806	POLR2F	75	71.429	Felis_catus
ENSEBUG00000002842	-	90	63.462	ENSFDAG00000009926	POLR2F	72	71.429	Fukomys_damarensis
ENSEBUG00000002842	-	98	61.947	ENSFHEG00000005448	polr2f	78	68.367	Fundulus_heteroclitus
ENSEBUG00000002842	-	99	60.526	ENSGMOG00000009967	polr2f	77	65.306	Gadus_morhua
ENSEBUG00000002842	-	90	63.462	ENSGALG00000012291	POLR2F	72	71.429	Gallus_gallus
ENSEBUG00000002842	-	90	64.423	ENSGAFG00000017573	polr2f	77	67.347	Gambusia_affinis
ENSEBUG00000002842	-	98	61.062	ENSGACG00000007322	polr2f	79	65.000	Gasterosteus_aculeatus
ENSEBUG00000002842	-	90	64.423	ENSGAGG00000021757	POLR2F	72	72.527	Gopherus_agassizii
ENSEBUG00000002842	-	90	64.078	ENSGGOG00000005213	POLR2F	75	71.429	Gorilla_gorilla
ENSEBUG00000002842	-	90	65.385	ENSHBUG00000022089	polr2f	77	68.367	Haplochromis_burtoni
ENSEBUG00000002842	-	90	63.462	ENSHGLG00000018942	POLR2F	72	71.429	Heterocephalus_glaber_female
ENSEBUG00000002842	-	90	64.078	ENSHGLG00100012851	POLR2F	72	71.429	Heterocephalus_glaber_male
ENSEBUG00000002842	-	90	64.423	ENSHCOG00000006149	polr2f	77	67.347	Hippocampus_comes
ENSEBUG00000002842	-	84	67.010	ENSIPUG00000000814	polr2f	100	67.010	Ictalurus_punctatus
ENSEBUG00000002842	-	90	63.462	ENSSTOG00000025722	POLR2F	72	71.429	Ictidomys_tridecemlineatus
ENSEBUG00000002842	-	90	63.462	ENSJJAG00000008097	Polr2f	72	71.429	Jaculus_jaculus
ENSEBUG00000002842	-	90	64.423	ENSKMAG00000014230	polr2f	77	67.347	Kryptolebias_marmoratus
ENSEBUG00000002842	-	90	62.500	ENSLBEG00000008383	polr2f	83	64.000	Labrus_bergylta
ENSEBUG00000002842	-	90	63.462	ENSLACG00000003931	POLR2F	79	65.000	Latimeria_chalumnae
ENSEBUG00000002842	-	88	66.337	ENSLOCG00000011827	polr2f	77	66.000	Lepisosteus_oculatus
ENSEBUG00000002842	-	90	63.462	ENSLAFG00000012632	POLR2F	72	71.429	Loxodonta_africana
ENSEBUG00000002842	-	90	64.078	ENSMFAG00000033687	POLR2F	75	71.429	Macaca_fascicularis
ENSEBUG00000002842	-	90	64.078	ENSMMUG00000038231	POLR2F	75	71.429	Macaca_mulatta
ENSEBUG00000002842	-	90	64.078	ENSMNEG00000044365	POLR2F	75	71.429	Macaca_nemestrina
ENSEBUG00000002842	-	90	64.078	ENSMLEG00000033077	POLR2F	75	71.429	Mandrillus_leucophaeus
ENSEBUG00000002842	-	90	64.423	ENSMAMG00000008056	polr2f	77	67.347	Mastacembelus_armatus
ENSEBUG00000002842	-	90	65.385	ENSMZEG00005005705	polr2f	77	68.367	Maylandia_zebra
ENSEBUG00000002842	-	90	63.462	ENSMGAG00000012504	POLR2F	72	71.429	Meleagris_gallopavo
ENSEBUG00000002842	-	90	63.462	ENSMAUG00000018586	Polr2f	72	71.429	Mesocricetus_auratus
ENSEBUG00000002842	-	90	64.078	ENSMICG00000013128	POLR2F	75	71.429	Microcebus_murinus
ENSEBUG00000002842	-	90	63.462	ENSMOCG00000000237	Polr2f	72	71.429	Microtus_ochrogaster
ENSEBUG00000002842	-	90	64.423	ENSMMOG00000005106	polr2f	77	67.347	Mola_mola
ENSEBUG00000002842	-	90	65.049	ENSMODG00000019063	POLR2F	72	72.527	Monodelphis_domestica
ENSEBUG00000002842	-	90	63.462	ENSMALG00000001444	polr2f	77	66.327	Monopterus_albus
ENSEBUG00000002842	-	90	62.500	MGP_CAROLIEiJ_G0020006	Polr2f	72	70.330	Mus_caroli
ENSEBUG00000002842	-	90	62.500	ENSMUSG00000033020	Polr2f	72	70.330	Mus_musculus
ENSEBUG00000002842	-	90	62.500	MGP_PahariEiJ_G0020008	Polr2f	72	70.330	Mus_pahari
ENSEBUG00000002842	-	90	62.500	MGP_SPRETEiJ_G0020904	Polr2f	72	70.330	Mus_spretus
ENSEBUG00000002842	-	90	64.078	ENSMPUG00000012997	POLR2F	72	71.429	Mustela_putorius_furo
ENSEBUG00000002842	-	90	61.321	ENSMLUG00000014315	-	72	68.817	Myotis_lucifugus
ENSEBUG00000002842	-	86	63.636	ENSMLUG00000029612	-	71	70.000	Myotis_lucifugus
ENSEBUG00000002842	-	90	63.462	ENSNGAG00000020682	Polr2f	72	71.429	Nannospalax_galili
ENSEBUG00000002842	-	90	65.385	ENSNBRG00000002492	polr2f	77	68.367	Neolamprologus_brichardi
ENSEBUG00000002842	-	90	64.078	ENSNLEG00000014987	-	75	71.429	Nomascus_leucogenys
ENSEBUG00000002842	-	90	63.462	ENSODEG00000014123	POLR2F	72	71.429	Octodon_degus
ENSEBUG00000002842	-	90	65.385	ENSONIG00000008394	polr2f	77	68.367	Oreochromis_niloticus
ENSEBUG00000002842	-	90	64.423	ENSOANG00000014684	POLR2F	72	72.527	Ornithorhynchus_anatinus
ENSEBUG00000002842	-	90	63.462	ENSOCUG00000012064	POLR2F	72	71.429	Oryctolagus_cuniculus
ENSEBUG00000002842	-	98	58.400	ENSORLG00000014580	polr2f	77	67.347	Oryzias_latipes
ENSEBUG00000002842	-	98	58.400	ENSORLG00020006910	polr2f	77	67.347	Oryzias_latipes_hni
ENSEBUG00000002842	-	79	63.736	ENSORLG00015015332	polr2f	57	67.059	Oryzias_latipes_hsok
ENSEBUG00000002842	-	90	63.462	ENSOGAG00000025463	POLR2F	72	71.429	Otolemur_garnettii
ENSEBUG00000002842	-	90	63.462	ENSOARG00000014692	POLR2F	72	71.429	Ovis_aries
ENSEBUG00000002842	-	90	64.078	ENSPPAG00000024276	POLR2F	75	71.429	Pan_paniscus
ENSEBUG00000002842	-	90	64.078	ENSPPRG00000013030	POLR2F	75	71.429	Panthera_pardus
ENSEBUG00000002842	-	86	66.667	ENSPTIG00000000632	POLR2F	83	66.667	Panthera_tigris_altaica
ENSEBUG00000002842	-	90	64.078	ENSPTRG00000014356	POLR2F	75	71.429	Pan_troglodytes
ENSEBUG00000002842	-	90	64.078	ENSPANG00000023979	POLR2F	75	71.429	Papio_anubis
ENSEBUG00000002842	-	90	63.462	ENSPKIG00000002464	polr2f	77	66.327	Paramormyrops_kingsleyae
ENSEBUG00000002842	-	62	80.282	ENSPSIG00000013913	POLR2F	100	80.282	Pelodiscus_sinensis
ENSEBUG00000002842	-	90	64.423	ENSPMGG00000009619	polr2f	77	67.347	Periophthalmus_magnuspinnatus
ENSEBUG00000002842	-	90	63.462	ENSPEMG00000008322	Polr2f	72	71.429	Peromyscus_maniculatus_bairdii
ENSEBUG00000002842	-	90	65.049	ENSPCIG00000012000	-	72	72.527	Phascolarctos_cinereus
ENSEBUG00000002842	-	90	65.385	ENSPFOG00000000139	polr2f	77	68.367	Poecilia_formosa
ENSEBUG00000002842	-	90	65.385	ENSPLAG00000000988	polr2f	77	68.367	Poecilia_latipinna
ENSEBUG00000002842	-	90	65.385	ENSPMEG00000019063	polr2f	77	68.367	Poecilia_mexicana
ENSEBUG00000002842	-	65	64.000	ENSPREG00000016749	polr2f	70	68.116	Poecilia_reticulata
ENSEBUG00000002842	-	90	63.462	ENSPPYG00000011809	POLR2F	72	71.429	Pongo_abelii
ENSEBUG00000002842	-	90	64.078	ENSPCOG00000025716	POLR2F	75	71.429	Propithecus_coquereli
ENSEBUG00000002842	-	90	65.385	ENSPNYG00000019790	polr2f	77	68.367	Pundamilia_nyererei
ENSEBUG00000002842	-	90	64.423	ENSPNAG00000009017	polr2f	77	67.347	Pygocentrus_nattereri
ENSEBUG00000002842	-	90	62.500	ENSRNOG00000011214	Polr2f	72	70.330	Rattus_norvegicus
ENSEBUG00000002842	-	90	64.078	ENSRBIG00000044878	POLR2F	75	71.429	Rhinopithecus_bieti
ENSEBUG00000002842	-	90	64.078	ENSRROG00000019586	POLR2F	75	71.429	Rhinopithecus_roxellana
ENSEBUG00000002842	-	73	68.235	YPR187W	RPO26	55	68.235	Saccharomyces_cerevisiae
ENSEBUG00000002842	-	90	64.078	ENSSBOG00000023340	POLR2F	75	71.429	Saimiri_boliviensis_boliviensis
ENSEBUG00000002842	-	90	65.049	ENSSHAG00000008502	POLR2F	72	72.527	Sarcophilus_harrisii
ENSEBUG00000002842	-	90	65.385	ENSSFOG00015012810	polr2f	77	68.367	Scleropages_formosus
ENSEBUG00000002842	-	90	64.423	ENSSMAG00000005354	polr2f	77	67.347	Scophthalmus_maximus
ENSEBUG00000002842	-	90	64.423	ENSSDUG00000016273	polr2f	77	67.347	Seriola_dumerili
ENSEBUG00000002842	-	90	64.423	ENSSLDG00000024895	polr2f	77	67.347	Seriola_lalandi_dorsalis
ENSEBUG00000002842	-	90	64.423	ENSSPUG00000011343	POLR2F	72	72.527	Sphenodon_punctatus
ENSEBUG00000002842	-	90	65.385	ENSSPAG00000019646	polr2f	77	68.367	Stegastes_partitus
ENSEBUG00000002842	-	90	62.500	ENSSSCG00000000116	POLR2F	72	70.330	Sus_scrofa
ENSEBUG00000002842	-	63	63.889	ENSTGUG00000016504	-	70	74.194	Taeniopygia_guttata
ENSEBUG00000002842	-	87	66.000	ENSTGUG00000010476	POLR2F	66	72.527	Taeniopygia_guttata
ENSEBUG00000002842	-	90	63.462	ENSTRUG00000021130	polr2f	55	66.327	Takifugu_rubripes
ENSEBUG00000002842	-	90	64.423	ENSTNIG00000010827	polr2f	77	67.347	Tetraodon_nigroviridis
ENSEBUG00000002842	-	90	64.078	ENSUAMG00000020504	POLR2F	72	71.429	Ursus_americanus
ENSEBUG00000002842	-	90	64.078	ENSUMAG00000015052	POLR2F	72	71.429	Ursus_maritimus
ENSEBUG00000002842	-	90	63.462	ENSVVUG00000024021	POLR2F	69	71.429	Vulpes_vulpes
ENSEBUG00000002842	-	90	63.462	ENSXETG00000006346	polr2f	65	77.108	Xenopus_tropicalis
ENSEBUG00000002842	-	90	65.385	ENSXCOG00000015983	polr2f	77	68.367	Xiphophorus_couchianus
ENSEBUG00000002842	-	90	65.385	ENSXMAG00000001559	polr2f	77	68.367	Xiphophorus_maculatus