EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000002947 (Gene tree)
Gene ID: -
Gene Symbol: cwc25
Alias: ccdc49|fc11a02|flj20291l|im:7140273|pate|pte|wu:fc11a02|zgc:55552
Full Name: CWC25 spliceosome-associated protein homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 30127 bases
Position: chrFYBX02009696.1:2471077-2501203
Accession: ZDB-GENE-040426-2817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004179	CWC25	PF12542.8	3.7e-16	1	1
ENSEBUP00000004210	CWC25	PF12542.8	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004633	-	522	-	ENSEBUP00000004210	173 (aa)	-	-
ENSEBUT00000004600	-	5962	-	ENSEBUP00000004179	395 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002947	cwc25	82	62.676	ENSG00000273559	CWC25	94	76.562	Homo_sapiens
ENSEBUG00000002947	cwc25	82	62.676	ENSAMEG00000004292	CWC25	100	47.430	Ailuropoda_melanoleuca
ENSEBUG00000002947	cwc25	82	59.155	ENSAPEG00000013237	cwc25	100	45.652	Amphiprion_percula
ENSEBUG00000002947	cwc25	100	43.689	ENSATEG00000000799	cwc25	100	46.135	Anabas_testudineus
ENSEBUG00000002947	cwc25	78	59.559	ENSAPLG00000003710	CWC25	99	47.073	Anas_platyrhynchos
ENSEBUG00000002947	cwc25	100	48.730	ENSACAG00000013140	CWC25	100	48.730	Anolis_carolinensis
ENSEBUG00000002947	cwc25	96	56.886	ENSANAG00000033550	CWC25	100	43.609	Aotus_nancymaae
ENSEBUG00000002947	cwc25	85	58.108	ENSACLG00000009352	cwc25	100	44.903	Astatotilapia_calliptera
ENSEBUG00000002947	cwc25	88	57.143	ENSAMXG00000035125	cwc25	100	44.581	Astyanax_mexicanus
ENSEBUG00000002947	cwc25	84	61.905	ENSBTAG00000030591	CWC25	89	61.905	Bos_taurus
ENSEBUG00000002947	cwc25	96	56.886	ENSCJAG00000008289	CWC25	100	48.235	Callithrix_jacchus
ENSEBUG00000002947	cwc25	82	62.676	ENSCAFG00000016561	CWC25	100	48.364	Canis_familiaris
ENSEBUG00000002947	cwc25	82	62.676	ENSCAFG00020023017	CWC25	100	47.897	Canis_lupus_dingo
ENSEBUG00000002947	cwc25	82	62.676	ENSCHIG00000015063	CWC25	100	47.887	Capra_hircus
ENSEBUG00000002947	cwc25	82	62.937	ENSTSYG00000011332	CWC25	100	43.961	Carlito_syrichta
ENSEBUG00000002947	cwc25	81	61.268	ENSCAPG00000014542	CWC25	99	48.009	Cavia_aperea
ENSEBUG00000002947	cwc25	82	63.380	ENSCPOG00000015127	CWC25	100	48.936	Cavia_porcellus
ENSEBUG00000002947	cwc25	82	63.380	ENSCCAG00000028719	CWC25	100	48.941	Cebus_capucinus
ENSEBUG00000002947	cwc25	90	58.385	ENSCATG00000040771	CWC25	100	43.560	Cercocebus_atys
ENSEBUG00000002947	cwc25	82	62.937	ENSCLAG00000017102	CWC25	87	62.937	Chinchilla_lanigera
ENSEBUG00000002947	cwc25	100	47.418	ENSCSAG00000002654	CWC25	100	48.357	Chlorocebus_sabaeus
ENSEBUG00000002947	cwc25	78	61.314	ENSCPBG00000027490	CWC25	88	49.639	Chrysemys_picta_bellii
ENSEBUG00000002947	cwc25	90	58.385	ENSCANG00000037099	CWC25	100	43.326	Colobus_angolensis_palliatus
ENSEBUG00000002947	cwc25	82	62.676	ENSCGRG00001020785	Cwc25	100	49.763	Cricetulus_griseus_chok1gshd
ENSEBUG00000002947	cwc25	82	62.676	ENSCGRG00000005085	Cwc25	100	49.763	Cricetulus_griseus_crigri
ENSEBUG00000002947	cwc25	83	59.589	ENSCSEG00000016305	cwc25	100	45.146	Cynoglossus_semilaevis
ENSEBUG00000002947	cwc25	82	60.563	ENSCVAG00000007828	cwc25	100	47.317	Cyprinodon_variegatus
ENSEBUG00000002947	cwc25	100	46.715	ENSDARG00000003382	cwc25	100	46.959	Danio_rerio
ENSEBUG00000002947	cwc25	82	62.676	ENSDNOG00000042410	CWC25	100	48.832	Dasypus_novemcinctus
ENSEBUG00000002947	cwc25	82	62.676	ENSDORG00000003061	Cwc25	100	48.936	Dipodomys_ordii
ENSEBUG00000002947	cwc25	82	62.676	ENSEASG00005001871	CWC25	100	47.887	Equus_asinus_asinus
ENSEBUG00000002947	cwc25	82	62.676	ENSECAG00000019122	CWC25	100	47.887	Equus_caballus
ENSEBUG00000002947	cwc25	82	59.155	ENSELUG00000009127	cwc25	100	46.265	Esox_lucius
ENSEBUG00000002947	cwc25	82	62.676	ENSFCAG00000028119	CWC25	100	46.948	Felis_catus
ENSEBUG00000002947	cwc25	79	57.664	ENSFALG00000013293	CWC25	99	43.519	Ficedula_albicollis
ENSEBUG00000002947	cwc25	82	62.411	ENSFDAG00000007745	CWC25	100	47.202	Fukomys_damarensis
ENSEBUG00000002947	cwc25	82	59.859	ENSFHEG00000004754	cwc25	100	46.210	Fundulus_heteroclitus
ENSEBUG00000002947	cwc25	82	58.451	ENSGMOG00000013001	cwc25	72	60.843	Gadus_morhua
ENSEBUG00000002947	cwc25	82	60.563	ENSGALG00000001624	CWC25	100	48.694	Gallus_gallus
ENSEBUG00000002947	cwc25	82	59.859	ENSGAFG00000007492	cwc25	100	46.117	Gambusia_affinis
ENSEBUG00000002947	cwc25	82	58.451	ENSGACG00000018153	cwc25	100	42.890	Gasterosteus_aculeatus
ENSEBUG00000002947	cwc25	82	62.676	ENSGAGG00000022972	CWC25	100	49.763	Gopherus_agassizii
ENSEBUG00000002947	cwc25	82	62.676	ENSGGOG00000007083	CWC25	100	48.235	Gorilla_gorilla
ENSEBUG00000002947	cwc25	85	57.432	ENSHBUG00000001392	cwc25	100	46.005	Haplochromis_burtoni
ENSEBUG00000002947	cwc25	100	46.868	ENSHGLG00000014785	CWC25	100	48.571	Heterocephalus_glaber_female
ENSEBUG00000002947	cwc25	82	63.380	ENSHGLG00100017354	CWC25	100	46.759	Heterocephalus_glaber_male
ENSEBUG00000002947	cwc25	82	61.268	ENSHCOG00000002434	cwc25	100	46.489	Hippocampus_comes
ENSEBUG00000002947	cwc25	100	45.209	ENSIPUG00000012581	CWC25	100	45.297	Ictalurus_punctatus
ENSEBUG00000002947	cwc25	82	62.676	ENSSTOG00000014268	CWC25	100	48.706	Ictidomys_tridecemlineatus
ENSEBUG00000002947	cwc25	82	59.859	ENSKMAG00000015418	cwc25	99	47.826	Kryptolebias_marmoratus
ENSEBUG00000002947	cwc25	84	39.820	ENSLACG00000001743	CWC25	100	41.983	Latimeria_chalumnae
ENSEBUG00000002947	cwc25	83	61.806	ENSLOCG00000013707	cwc25	100	48.113	Lepisosteus_oculatus
ENSEBUG00000002947	cwc25	82	62.676	ENSLAFG00000002238	CWC25	100	48.585	Loxodonta_africana
ENSEBUG00000002947	cwc25	90	58.385	ENSMNEG00000033729	CWC25	100	48.000	Macaca_nemestrina
ENSEBUG00000002947	cwc25	82	62.676	ENSMLEG00000033355	CWC25	99	46.253	Mandrillus_leucophaeus
ENSEBUG00000002947	cwc25	82	59.155	ENSMAMG00000005194	cwc25	100	45.320	Mastacembelus_armatus
ENSEBUG00000002947	cwc25	85	58.108	ENSMZEG00005012421	cwc25	100	44.903	Maylandia_zebra
ENSEBUG00000002947	cwc25	81	60.284	ENSMGAG00000005158	CWC25	99	47.786	Meleagris_gallopavo
ENSEBUG00000002947	cwc25	82	62.937	ENSMICG00000003004	CWC25	100	47.653	Microcebus_murinus
ENSEBUG00000002947	cwc25	82	62.676	ENSMOCG00000000224	Cwc25	100	49.526	Microtus_ochrogaster
ENSEBUG00000002947	cwc25	100	47.837	ENSMODG00000012627	CWC25	100	48.798	Monodelphis_domestica
ENSEBUG00000002947	cwc25	100	45.813	ENSMALG00000005638	cwc25	100	45.433	Monopterus_albus
ENSEBUG00000002947	cwc25	95	57.895	MGP_CAROLIEiJ_G0017064	Cwc25	100	50.608	Mus_caroli
ENSEBUG00000002947	cwc25	94	57.647	ENSMUSG00000018541	Cwc25	100	47.073	Mus_musculus
ENSEBUG00000002947	cwc25	82	62.937	MGP_PahariEiJ_G0018193	Cwc25	100	47.897	Mus_pahari
ENSEBUG00000002947	cwc25	95	57.310	MGP_SPRETEiJ_G0017910	Cwc25	95	57.310	Mus_spretus
ENSEBUG00000002947	cwc25	82	62.676	ENSMPUG00000015077	CWC25	100	48.131	Mustela_putorius_furo
ENSEBUG00000002947	cwc25	82	62.676	ENSMLUG00000029653	CWC25	100	48.826	Myotis_lucifugus
ENSEBUG00000002947	cwc25	82	62.676	ENSMLUG00000029248	-	98	64.671	Myotis_lucifugus
ENSEBUG00000002947	cwc25	100	49.176	ENSNGAG00000007394	Cwc25	100	47.575	Nannospalax_galili
ENSEBUG00000002947	cwc25	82	61.972	ENSNLEG00000000617	CWC25	100	47.765	Nomascus_leucogenys
ENSEBUG00000002947	cwc25	78	59.559	ENSMEUG00000004156	CWC25	100	47.608	Notamacropus_eugenii
ENSEBUG00000002947	cwc25	86	61.333	ENSODEG00000017487	CWC25	100	48.219	Octodon_degus
ENSEBUG00000002947	cwc25	83	59.722	ENSONIG00000003251	cwc25	100	46.005	Oreochromis_niloticus
ENSEBUG00000002947	cwc25	82	60.563	ENSOANG00000001231	-	100	41.878	Ornithorhynchus_anatinus
ENSEBUG00000002947	cwc25	82	62.676	ENSOCUG00000013906	CWC25	100	47.653	Oryctolagus_cuniculus
ENSEBUG00000002947	cwc25	84	58.503	ENSORLG00000018569	cwc25	100	47.677	Oryzias_latipes
ENSEBUG00000002947	cwc25	84	58.503	ENSORLG00020012087	cwc25	100	47.666	Oryzias_latipes_hni
ENSEBUG00000002947	cwc25	84	57.823	ENSORLG00015011062	cwc25	100	46.944	Oryzias_latipes_hsok
ENSEBUG00000002947	cwc25	84	59.184	ENSOMEG00000019365	cwc25	100	47.174	Oryzias_melastigma
ENSEBUG00000002947	cwc25	83	62.500	ENSOGAG00000008785	CWC25	100	45.854	Otolemur_garnettii
ENSEBUG00000002947	cwc25	82	62.676	ENSOARG00000009937	CWC25	100	47.653	Ovis_aries
ENSEBUG00000002947	cwc25	90	56.886	ENSPPAG00000023487	CWC25	100	48.235	Pan_paniscus
ENSEBUG00000002947	cwc25	82	62.676	ENSPPRG00000005029	CWC25	100	46.948	Panthera_pardus
ENSEBUG00000002947	cwc25	82	62.676	ENSPTIG00000020264	CWC25	100	46.948	Panthera_tigris_altaica
ENSEBUG00000002947	cwc25	90	56.886	ENSPTRG00000009077	CWC25	100	47.765	Pan_troglodytes
ENSEBUG00000002947	cwc25	83	62.500	ENSPANG00000022017	CWC25	100	48.235	Papio_anubis
ENSEBUG00000002947	cwc25	83	60.417	ENSPKIG00000007116	cwc25	100	43.350	Paramormyrops_kingsleyae
ENSEBUG00000002947	cwc25	51	51.111	ENSPSIG00000011817	CWC25	100	43.850	Pelodiscus_sinensis
ENSEBUG00000002947	cwc25	82	63.380	ENSPEMG00000000026	Cwc25	100	48.478	Peromyscus_maniculatus_bairdii
ENSEBUG00000002947	cwc25	100	48.821	ENSPCIG00000002943	CWC25	100	48.821	Phascolarctos_cinereus
ENSEBUG00000002947	cwc25	82	60.563	ENSPFOG00000017152	cwc25	100	45.742	Poecilia_formosa
ENSEBUG00000002947	cwc25	72	56.349	ENSPLAG00000004535	cwc25	100	43.797	Poecilia_latipinna
ENSEBUG00000002947	cwc25	82	60.563	ENSPMEG00000023752	cwc25	100	45.742	Poecilia_mexicana
ENSEBUG00000002947	cwc25	82	62.676	ENSPPYG00000008503	CWC25	100	47.765	Pongo_abelii
ENSEBUG00000002947	cwc25	78	61.029	ENSPCAG00000000433	CWC25	94	44.875	Procavia_capensis
ENSEBUG00000002947	cwc25	82	62.676	ENSPCOG00000023678	CWC25	100	48.000	Propithecus_coquereli
ENSEBUG00000002947	cwc25	78	61.029	ENSPVAG00000002273	CWC25	100	47.255	Pteropus_vampyrus
ENSEBUG00000002947	cwc25	100	43.584	ENSPNAG00000028668	cwc25	100	45.012	Pygocentrus_nattereri
ENSEBUG00000002947	cwc25	82	62.676	ENSRNOG00000004091	Cwc25	100	47.418	Rattus_norvegicus
ENSEBUG00000002947	cwc25	90	58.385	ENSRBIG00000033457	CWC25	100	48.000	Rhinopithecus_bieti
ENSEBUG00000002947	cwc25	90	58.385	ENSRROG00000039968	CWC25	100	48.000	Rhinopithecus_roxellana
ENSEBUG00000002947	cwc25	52	37.500	YNL245C	-	54	37.500	Saccharomyces_cerevisiae
ENSEBUG00000002947	cwc25	82	61.972	ENSSHAG00000017267	CWC25	100	50.360	Sarcophilus_harrisii
ENSEBUG00000002947	cwc25	100	47.118	ENSSFOG00015003449	cwc25	100	47.118	Scleropages_formosus
ENSEBUG00000002947	cwc25	82	61.972	ENSSMAG00000010953	cwc25	100	47.073	Scophthalmus_maximus
ENSEBUG00000002947	cwc25	82	59.155	ENSSDUG00000004302	cwc25	100	45.763	Seriola_dumerili
ENSEBUG00000002947	cwc25	82	58.451	ENSSLDG00000005761	cwc25	100	45.278	Seriola_lalandi_dorsalis
ENSEBUG00000002947	cwc25	100	47.489	ENSSPUG00000018024	CWC25	100	49.417	Sphenodon_punctatus
ENSEBUG00000002947	cwc25	100	48.522	ENSSSCG00000021478	CWC25	100	50.000	Sus_scrofa
ENSEBUG00000002947	cwc25	78	55.797	ENSTGUG00000003011	CWC25	100	45.977	Taeniopygia_guttata
ENSEBUG00000002947	cwc25	100	44.963	ENSTRUG00000004650	cwc25	100	47.160	Takifugu_rubripes
ENSEBUG00000002947	cwc25	100	44.140	ENSTNIG00000014143	cwc25	100	44.888	Tetraodon_nigroviridis
ENSEBUG00000002947	cwc25	78	61.029	ENSTBEG00000013187	CWC25	78	63.750	Tupaia_belangeri
ENSEBUG00000002947	cwc25	78	61.029	ENSTTRG00000006662	CWC25	100	47.031	Tursiops_truncatus
ENSEBUG00000002947	cwc25	82	62.676	ENSUAMG00000005592	CWC25	100	47.897	Ursus_americanus
ENSEBUG00000002947	cwc25	82	62.676	ENSUMAG00000017097	CWC25	100	47.897	Ursus_maritimus
ENSEBUG00000002947	cwc25	78	61.765	ENSVPAG00000005680	CWC25	82	64.780	Vicugna_pacos
ENSEBUG00000002947	cwc25	82	62.676	ENSVVUG00000002182	CWC25	100	47.887	Vulpes_vulpes
ENSEBUG00000002947	cwc25	79	61.594	ENSXETG00000023722	cwc25	100	47.382	Xenopus_tropicalis
ENSEBUG00000002947	cwc25	82	60.563	ENSXMAG00000018113	cwc25	100	46.883	Xiphophorus_maculatus