EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000002963 (Gene tree)
Gene ID: -
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA binding motif protein 25b
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 30670 bases
Position: chrFYBX02009758.1:417921-448590
Accession: ZDB-GENE-030131-5547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004175	PWI	PF01480.17	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004596	-	2466	-	ENSEBUP00000004175	627 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000002963	rbm25b	75	48.052	ENSEBUG00000009365	-	60	42.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002963	rbm25b	56	64.662	ENSAPOG00000017757	rbm25a	63	68.182	Acanthochromis_polyacanthus
ENSEBUG00000002963	rbm25b	56	64.662	ENSAOCG00000013695	rbm25a	64	68.182	Amphiprion_ocellaris
ENSEBUG00000002963	rbm25b	67	41.860	ENSATEG00000017312	rbm25b	74	41.039	Anabas_testudineus
ENSEBUG00000002963	rbm25b	56	65.152	ENSATEG00000020676	rbm25a	55	66.667	Anabas_testudineus
ENSEBUG00000002963	rbm25b	51	71.212	ENSACAG00000016239	RBM25	71	42.534	Anolis_carolinensis
ENSEBUG00000002963	rbm25b	65	41.007	ENSACLG00000027482	rbm25a	50	40.888	Astatotilapia_calliptera
ENSEBUG00000002963	rbm25b	67	41.492	ENSCSEG00000020737	rbm25b	71	37.601	Cynoglossus_semilaevis
ENSEBUG00000002963	rbm25b	59	56.688	ENSCVAG00000005498	rbm25a	71	66.667	Cyprinodon_variegatus
ENSEBUG00000002963	rbm25b	54	63.866	ENSEEUG00000007350	RBM25	52	42.821	Erinaceus_europaeus
ENSEBUG00000002963	rbm25b	58	59.028	ENSELUG00000007730	rbm25b	72	35.981	Esox_lucius
ENSEBUG00000002963	rbm25b	56	65.152	ENSFHEG00000005318	rbm25a	58	50.489	Fundulus_heteroclitus
ENSEBUG00000002963	rbm25b	65	42.417	ENSGAFG00000018036	rbm25a	53	39.869	Gambusia_affinis
ENSEBUG00000002963	rbm25b	69	36.961	ENSGAFG00000001092	rbm25b	64	38.644	Gambusia_affinis
ENSEBUG00000002963	rbm25b	52	71.212	ENSGAGG00000024524	RBM25	75	40.899	Gopherus_agassizii
ENSEBUG00000002963	rbm25b	66	40.187	ENSHBUG00000016908	rbm25a	70	41.020	Haplochromis_burtoni
ENSEBUG00000002963	rbm25b	72	41.357	ENSHCOG00000000142	rbm25b	75	37.084	Hippocampus_comes
ENSEBUG00000002963	rbm25b	63	37.531	ENSKMAG00000018826	rbm25b	72	37.942	Kryptolebias_marmoratus
ENSEBUG00000002963	rbm25b	59	60.256	ENSKMAG00000016242	rbm25a	58	44.984	Kryptolebias_marmoratus
ENSEBUG00000002963	rbm25b	68	41.348	ENSLBEG00000010667	rbm25b	72	38.173	Labrus_bergylta
ENSEBUG00000002963	rbm25b	60	39.295	ENSMAMG00000000165	rbm25a	63	68.182	Mastacembelus_armatus
ENSEBUG00000002963	rbm25b	67	38.724	ENSMAMG00000004524	rbm25b	72	38.240	Mastacembelus_armatus
ENSEBUG00000002963	rbm25b	66	40.515	ENSMZEG00005011183	rbm25a	70	41.020	Maylandia_zebra
ENSEBUG00000002963	rbm25b	55	65.116	ENSMOCG00000001935	Rbm25	73	42.563	Microtus_ochrogaster
ENSEBUG00000002963	rbm25b	55	38.083	ENSMALG00000020459	rbm25a	65	66.667	Monopterus_albus
ENSEBUG00000002963	rbm25b	55	65.116	MGP_CAROLIEiJ_G0017921	Rbm25	64	57.803	Mus_caroli
ENSEBUG00000002963	rbm25b	55	65.116	ENSMUSG00000010608	Rbm25	64	57.803	Mus_musculus
ENSEBUG00000002963	rbm25b	55	65.116	MGP_PahariEiJ_G0029677	Rbm25	64	57.803	Mus_pahari
ENSEBUG00000002963	rbm25b	55	65.116	ENSNGAG00000018465	Rbm25	72	42.792	Nannospalax_galili
ENSEBUG00000002963	rbm25b	68	40.088	ENSORLG00000011874	rbm25b	71	39.389	Oryzias_latipes
ENSEBUG00000002963	rbm25b	55	39.335	ENSORLG00000009958	rbm25a	53	41.089	Oryzias_latipes
ENSEBUG00000002963	rbm25b	67	41.412	ENSORLG00020016422	rbm25b	71	39.159	Oryzias_latipes_hni
ENSEBUG00000002963	rbm25b	68	40.570	ENSORLG00015011269	rbm25b	71	39.482	Oryzias_latipes_hsok
ENSEBUG00000002963	rbm25b	68	40.700	ENSOMEG00000023172	rbm25b	74	38.934	Oryzias_melastigma
ENSEBUG00000002963	rbm25b	52	62.162	ENSOMEG00000022138	rbm25a	64	66.667	Oryzias_melastigma
ENSEBUG00000002963	rbm25b	62	40.941	ENSPKIG00000003203	rbm25b	71	39.542	Paramormyrops_kingsleyae
ENSEBUG00000002963	rbm25b	52	71.212	ENSPSIG00000006058	RBM25	71	43.409	Pelodiscus_sinensis
ENSEBUG00000002963	rbm25b	61	39.583	ENSPMGG00000001791	rbm25a	89	41.337	Periophthalmus_magnuspinnatus
ENSEBUG00000002963	rbm25b	56	65.909	ENSPFOG00000017931	rbm25a	58	50.162	Poecilia_formosa
ENSEBUG00000002963	rbm25b	56	65.909	ENSPLAG00000018338	rbm25a	58	50.489	Poecilia_latipinna
ENSEBUG00000002963	rbm25b	56	65.909	ENSPMEG00000024470	rbm25a	61	50.485	Poecilia_mexicana
ENSEBUG00000002963	rbm25b	60	37.887	ENSPMEG00000019161	rbm25b	72	38.365	Poecilia_mexicana
ENSEBUG00000002963	rbm25b	63	36.946	ENSPREG00000008522	rbm25b	72	38.176	Poecilia_reticulata
ENSEBUG00000002963	rbm25b	56	65.909	ENSPREG00000009228	rbm25a	70	41.096	Poecilia_reticulata
ENSEBUG00000002963	rbm25b	62	40.515	ENSSFOG00015007093	rbm25	72	39.159	Scleropages_formosus
ENSEBUG00000002963	rbm25b	72	40.659	ENSSPAG00000016168	rbm25b	72	38.073	Stegastes_partitus
ENSEBUG00000002963	rbm25b	53	65.116	ENSTGUG00000011246	-	72	42.921	Taeniopygia_guttata
ENSEBUG00000002963	rbm25b	65	40.865	ENSTRUG00000017964	rbm25b	75	38.119	Takifugu_rubripes
ENSEBUG00000002963	rbm25b	95	34.925	ENSTNIG00000012222	rbm25b	63	38.964	Tetraodon_nigroviridis
ENSEBUG00000002963	rbm25b	55	38.329	ENSTNIG00000004673	rbm25a	71	65.152	Tetraodon_nigroviridis
ENSEBUG00000002963	rbm25b	65	41.686	ENSXCOG00000004043	RBM25	71	36.711	Xiphophorus_couchianus
ENSEBUG00000002963	rbm25b	74	36.667	ENSXMAG00000017290	rbm25b	72	39.089	Xiphophorus_maculatus
ENSEBUG00000002963	rbm25b	56	65.909	ENSXMAG00000009077	RBM25	59	50.485	Xiphophorus_maculatus