EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000002973 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 27608 bases
Position: chrFYBX02007741.1:1419063-1446670
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004222	RRM_1	PF00076.22	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004646	-	648	-	ENSEBUP00000004222	215 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000002973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000002973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000002973	-	72	70.323	ENSEBUG00000003580	-	66	70.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000002973	-	81	56.250	ENSG00000143889	HNRNPLL	80	56.250	Homo_sapiens
ENSEBUG00000002973	-	78	63.314	ENSG00000104824	HNRNPL	91	64.417	Homo_sapiens
ENSEBUG00000002973	-	73	56.688	ENSAOCG00000024299	-	58	56.688	Amphiprion_ocellaris
ENSEBUG00000002973	-	81	56.250	ENSANAG00000034951	HNRNPLL	61	56.250	Aotus_nancymaae
ENSEBUG00000002973	-	78	52.071	ENSANAG00000027695	-	53	52.071	Aotus_nancymaae
ENSEBUG00000002973	-	73	59.236	ENSAMXG00000007014	-	58	59.236	Astyanax_mexicanus
ENSEBUG00000002973	-	81	53.409	ENSCJAG00000004088	HNRNPLL	61	53.409	Callithrix_jacchus
ENSEBUG00000002973	-	78	63.314	ENSCJAG00000013931	-	60	61.310	Callithrix_jacchus
ENSEBUG00000002973	-	78	57.738	ENSCAFG00020022813	HNRNPLL	53	59.236	Canis_lupus_dingo
ENSEBUG00000002973	-	78	60.819	ENSCAFG00020017321	-	52	63.522	Canis_lupus_dingo
ENSEBUG00000002973	-	81	56.250	ENSCPOG00000007588	HNRNPLL	62	56.250	Cavia_porcellus
ENSEBUG00000002973	-	73	30.000	ENSCCAG00000025811	-	62	30.526	Cebus_capucinus
ENSEBUG00000002973	-	81	56.250	ENSCCAG00000028404	HNRNPLL	61	56.250	Cebus_capucinus
ENSEBUG00000002973	-	73	30.270	ENSCCAG00000036365	-	58	30.270	Cebus_capucinus
ENSEBUG00000002973	-	81	56.250	ENSCATG00000023374	HNRNPLL	61	56.250	Cercocebus_atys
ENSEBUG00000002973	-	55	58.824	ENSCING00000001244	-	75	58.824	Ciona_intestinalis
ENSEBUG00000002973	-	81	56.250	ENSCANG00000033628	HNRNPLL	61	56.250	Colobus_angolensis_palliatus
ENSEBUG00000002973	-	73	30.526	ENSCANG00000042399	-	63	30.526	Colobus_angolensis_palliatus
ENSEBUG00000002973	-	73	30.000	ENSCANG00000038259	PTBP1	63	30.526	Colobus_angolensis_palliatus
ENSEBUG00000002973	-	73	65.605	ENSDARG00000035324	hnrnpl	57	65.605	Danio_rerio
ENSEBUG00000002973	-	73	42.038	ENSDARG00000116101	CABZ01100304.1	61	42.038	Danio_rerio
ENSEBUG00000002973	-	81	56.250	ENSDORG00000008609	Hnrnpll	61	56.250	Dipodomys_ordii
ENSEBUG00000002973	-	71	30.319	ENSEASG00005002596	-	54	30.851	Equus_asinus_asinus
ENSEBUG00000002973	-	73	30.000	ENSEASG00005021525	-	54	30.526	Equus_asinus_asinus
ENSEBUG00000002973	-	73	59.236	ENSECAG00000018354	HNRNPLL	54	59.236	Equus_caballus
ENSEBUG00000002973	-	77	60.843	ENSFHEG00000017940	-	83	60.843	Fundulus_heteroclitus
ENSEBUG00000002973	-	77	60.479	ENSFHEG00000017462	-	91	60.479	Fundulus_heteroclitus
ENSEBUG00000002973	-	78	61.905	ENSGALG00000043929	-	53	64.331	Gallus_gallus
ENSEBUG00000002973	-	75	64.417	ENSGAGG00000008378	-	91	64.417	Gopherus_agassizii
ENSEBUG00000002973	-	81	56.250	ENSGGOG00000003456	HNRNPLL	61	56.250	Gorilla_gorilla
ENSEBUG00000002973	-	73	57.325	ENSHBUG00000003120	HNRNPLL	58	57.325	Haplochromis_burtoni
ENSEBUG00000002973	-	81	55.932	ENSJJAG00000024192	Hnrnpll	60	55.932	Jaculus_jaculus
ENSEBUG00000002973	-	85	53.125	ENSLAFG00000025536	HNRNPL	70	57.988	Loxodonta_africana
ENSEBUG00000002973	-	81	56.250	ENSMMUG00000002338	HNRNPLL	61	56.250	Macaca_mulatta
ENSEBUG00000002973	-	78	63.314	ENSMNEG00000039542	-	91	61.585	Macaca_nemestrina
ENSEBUG00000002973	-	73	30.000	ENSMNEG00000028851	PTBP1	66	30.526	Macaca_nemestrina
ENSEBUG00000002973	-	81	56.250	ENSMLEG00000031558	HNRNPLL	61	56.250	Mandrillus_leucophaeus
ENSEBUG00000002973	-	81	56.250	ENSMICG00000013155	HNRNPLL	62	56.250	Microcebus_murinus
ENSEBUG00000002973	-	73	30.000	ENSMICG00000007131	PTBP1	59	30.526	Microcebus_murinus
ENSEBUG00000002973	-	73	30.000	ENSMOCG00000007495	Ptbp1	53	30.526	Microtus_ochrogaster
ENSEBUG00000002973	-	73	59.873	ENSMMOG00000018608	HNRNPLL	56	59.873	Mola_mola
ENSEBUG00000002973	-	73	30.000	MGP_CAROLIEiJ_G0015545	Ptbp1	54	30.526	Mus_caroli
ENSEBUG00000002973	-	78	63.314	MGP_CAROLIEiJ_G0029463	Hnrnpl	100	61.607	Mus_caroli
ENSEBUG00000002973	-	81	56.250	MGP_CAROLIEiJ_G0021900	Hnrnpll	51	56.250	Mus_caroli
ENSEBUG00000002973	-	76	30.964	MGP_CAROLIEiJ_G0026063	Ptbp3	64	43.617	Mus_caroli
ENSEBUG00000002973	-	78	63.314	ENSMUSG00000015165	Hnrnpl	100	61.607	Mus_musculus
ENSEBUG00000002973	-	76	30.964	ENSMUSG00000028382	Ptbp3	64	43.617	Mus_musculus
ENSEBUG00000002973	-	73	30.000	ENSMUSG00000006498	Ptbp1	54	30.526	Mus_musculus
ENSEBUG00000002973	-	81	56.250	ENSMUSG00000024095	Hnrnpll	52	56.250	Mus_musculus
ENSEBUG00000002973	-	76	31.472	MGP_PahariEiJ_G0028401	Ptbp3	64	43.617	Mus_pahari
ENSEBUG00000002973	-	73	30.000	MGP_PahariEiJ_G0030958	Ptbp1	54	30.526	Mus_pahari
ENSEBUG00000002973	-	78	63.314	MGP_PahariEiJ_G0012697	Hnrnpl	100	61.607	Mus_pahari
ENSEBUG00000002973	-	81	56.250	MGP_PahariEiJ_G0020889	Hnrnpll	51	56.250	Mus_pahari
ENSEBUG00000002973	-	78	63.314	MGP_SPRETEiJ_G0030559	Hnrnpl	100	61.607	Mus_spretus
ENSEBUG00000002973	-	81	56.250	MGP_SPRETEiJ_G0022815	Hnrnpll	52	56.250	Mus_spretus
ENSEBUG00000002973	-	76	30.964	MGP_SPRETEiJ_G0027028	Ptbp3	64	43.617	Mus_spretus
ENSEBUG00000002973	-	72	60.645	ENSNBRG00000024244	HNRNPLL	92	60.645	Neolamprologus_brichardi
ENSEBUG00000002973	-	73	31.250	ENSPTIG00000012325	-	57	31.250	Panthera_tigris_altaica
ENSEBUG00000002973	-	81	56.250	ENSPANG00000015805	HNRNPLL	61	56.250	Papio_anubis
ENSEBUG00000002973	-	76	35.204	ENSPMAG00000005883	ptbp2a	76	32.911	Petromyzon_marinus
ENSEBUG00000002973	-	81	54.190	ENSPCIG00000020489	HNRNPLL	55	54.190	Phascolarctos_cinereus
ENSEBUG00000002973	-	73	34.091	ENSPREG00000015110	-	50	34.091	Poecilia_reticulata
ENSEBUG00000002973	-	81	53.409	ENSPCOG00000025638	HNRNPLL	60	53.409	Propithecus_coquereli
ENSEBUG00000002973	-	72	60.645	ENSPNYG00000009070	-	92	60.645	Pundamilia_nyererei
ENSEBUG00000002973	-	73	34.091	ENSPNYG00000005088	-	57	34.091	Pundamilia_nyererei
ENSEBUG00000002973	-	73	30.000	ENSRBIG00000044228	PTBP1	63	30.526	Rhinopithecus_bieti
ENSEBUG00000002973	-	73	30.000	ENSRROG00000016534	PTBP1	63	30.526	Rhinopithecus_roxellana
ENSEBUG00000002973	-	81	56.250	ENSSBOG00000025720	HNRNPLL	61	56.250	Saimiri_boliviensis_boliviensis
ENSEBUG00000002973	-	73	55.975	ENSSLDG00000017942	-	57	55.975	Seriola_lalandi_dorsalis
ENSEBUG00000002973	-	73	57.325	ENSSPAG00000020833	-	63	57.325	Stegastes_partitus
ENSEBUG00000002973	-	78	57.738	ENSSSCG00000020878	HNRNPLL	53	59.236	Sus_scrofa
ENSEBUG00000002973	-	77	64.072	ENSSSCG00000035570	-	60	64.072	Sus_scrofa
ENSEBUG00000002973	-	68	58.108	ENSTRUG00000000830	-	61	58.108	Takifugu_rubripes
ENSEBUG00000002973	-	73	59.236	ENSUAMG00000024895	HNRNPLL	51	59.236	Ursus_americanus
ENSEBUG00000002973	-	73	31.868	ENSUMAG00000005280	-	52	31.868	Ursus_maritimus
ENSEBUG00000002973	-	73	59.236	ENSVVUG00000018784	HNRNPLL	53	59.236	Vulpes_vulpes
ENSEBUG00000002973	-	78	60.234	ENSVVUG00000006478	-	52	62.893	Vulpes_vulpes