EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003030 (Gene tree)
Gene ID: -
Gene Symbol: RAVER1
Alias: KIAA1978
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 37325 bases
Position: chrFYBX02010598.1:1871915-1909239
Accession: 30296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004270	RRM_1	PF00076.22	1.7e-20	1	2
ENSEBUP00000004270	RRM_1	PF00076.22	1.7e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004696	RAVER1-201	3181	-	ENSEBUP00000004270	742 (aa)	-	-
ENSEBUT00000004714	RAVER1-202	2881	-	ENSEBUP00000004287	642 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003030	RAVER1	52	34.230	ENSACAG00000008386	-	54	34.762	Anolis_carolinensis
ENSEBUG00000003030	RAVER1	53	38.384	ENSACLG00000018492	raver1	51	38.847	Astatotilapia_calliptera
ENSEBUG00000003030	RAVER1	56	35.698	ENSBTAG00000015721	RAVER1	59	36.971	Bos_taurus
ENSEBUG00000003030	RAVER1	54	36.131	ENSCPBG00000005349	-	52	36.613	Chrysemys_picta_bellii
ENSEBUG00000003030	RAVER1	50	36.898	ENSDARG00000052617	raver1	67	41.629	Danio_rerio
ENSEBUG00000003030	RAVER1	51	37.905	ENSDORG00000010106	-	61	38.131	Dipodomys_ordii
ENSEBUG00000003030	RAVER1	53	35.407	ENSEASG00005010544	-	70	36.957	Equus_asinus_asinus
ENSEBUG00000003030	RAVER1	53	34.848	ENSGAGG00000011748	-	66	34.498	Gopherus_agassizii
ENSEBUG00000003030	RAVER1	53	38.384	ENSHBUG00000021210	raver1	51	38.847	Haplochromis_burtoni
ENSEBUG00000003030	RAVER1	53	38.384	ENSMZEG00005019002	raver1	51	38.847	Maylandia_zebra
ENSEBUG00000003030	RAVER1	53	38.596	ENSONIG00000001559	raver1	70	44.091	Oreochromis_niloticus
ENSEBUG00000003030	RAVER1	53	39.394	ENSOMEG00000023956	raver1	54	39.394	Oryzias_melastigma
ENSEBUG00000003030	RAVER1	53	39.250	ENSTRUG00000025641	raver1	50	39.454	Takifugu_rubripes
ENSEBUG00000003030	RAVER1	50	33.933	ENSXETG00000011622	raver1	53	34.118	Xenopus_tropicalis