EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003089 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 149213 bases
Position: chrFYBX02010090.1:3054367-3203579
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004382	DZF	PF07528.14	3.5e-31	1	1
ENSEBUP00000004368	DZF	PF07528.14	3.8e-31	1	1
ENSEBUP00000004410	DZF	PF07528.14	9.7e-24	1	1
ENSEBUP00000004410	dsrm	PF00035.26	6.3e-09	1	1
ENSEBUP00000004382	dsrm	PF00035.26	7.9e-09	1	1
ENSEBUP00000004368	dsrm	PF00035.26	8.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004817	-	4210	-	ENSEBUP00000004382	588 (aa)	-	-
ENSEBUT00000004802	-	4297	-	ENSEBUP00000004368	617 (aa)	-	-
ENSEBUT00000004847	-	3026	-	ENSEBUP00000004410	519 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003089	-	71	40.260	ENSG00000165209	STRBP	58	36.364	Homo_sapiens
ENSEBUG00000003089	-	69	37.576	ENSAPOG00000009251	strbp	60	35.965	Acanthochromis_polyacanthus
ENSEBUG00000003089	-	71	40.260	ENSAMEG00000011017	STRBP	56	37.264	Ailuropoda_melanoleuca
ENSEBUG00000003089	-	69	38.182	ENSAOCG00000011332	strbp	58	44.138	Amphiprion_ocellaris
ENSEBUG00000003089	-	69	38.182	ENSAPEG00000007513	strbp	58	36.538	Amphiprion_percula
ENSEBUG00000003089	-	68	41.060	ENSAPLG00000006350	STRBP	56	36.792	Anas_platyrhynchos
ENSEBUG00000003089	-	71	40.260	ENSANAG00000021993	STRBP	57	44.056	Aotus_nancymaae
ENSEBUG00000003089	-	69	38.788	ENSACLG00000022623	strbp	56	44.138	Astatotilapia_calliptera
ENSEBUG00000003089	-	57	42.105	ENSAMXG00000015649	-	68	42.000	Astyanax_mexicanus
ENSEBUG00000003089	-	71	40.260	ENSBTAG00000021921	STRBP	54	44.056	Bos_taurus
ENSEBUG00000003089	-	71	40.260	ENSCJAG00000019997	STRBP	57	36.364	Callithrix_jacchus
ENSEBUG00000003089	-	70	40.260	ENSCAFG00000020235	STRBP	56	37.264	Canis_familiaris
ENSEBUG00000003089	-	70	40.260	ENSCAFG00020015377	STRBP	57	37.264	Canis_lupus_dingo
ENSEBUG00000003089	-	71	40.260	ENSCHIG00000018517	-	56	37.264	Capra_hircus
ENSEBUG00000003089	-	70	38.961	ENSCHIG00000022010	-	55	36.321	Capra_hircus
ENSEBUG00000003089	-	71	40.260	ENSTSYG00000004451	STRBP	57	37.273	Carlito_syrichta
ENSEBUG00000003089	-	70	40.260	ENSCPOG00000009817	STRBP	56	38.426	Cavia_porcellus
ENSEBUG00000003089	-	71	40.260	ENSCCAG00000027357	STRBP	55	41.447	Cebus_capucinus
ENSEBUG00000003089	-	71	40.260	ENSCATG00000038868	STRBP	57	36.842	Cercocebus_atys
ENSEBUG00000003089	-	70	40.260	ENSCLAG00000010826	STRBP	57	38.426	Chinchilla_lanigera
ENSEBUG00000003089	-	71	40.260	ENSCSAG00000013456	STRBP	57	36.364	Chlorocebus_sabaeus
ENSEBUG00000003089	-	70	44.262	ENSCPBG00000009770	STRBP	61	36.620	Chrysemys_picta_bellii
ENSEBUG00000003089	-	71	40.260	ENSCANG00000043113	STRBP	53	44.056	Colobus_angolensis_palliatus
ENSEBUG00000003089	-	71	40.260	ENSCGRG00001006354	Strbp	54	44.056	Cricetulus_griseus_chok1gshd
ENSEBUG00000003089	-	71	40.260	ENSCGRG00000009687	Strbp	56	37.736	Cricetulus_griseus_crigri
ENSEBUG00000003089	-	63	43.902	ENSCVAG00000011985	strbp	57	44.521	Cyprinodon_variegatus
ENSEBUG00000003089	-	72	37.662	ENSDARG00000021455	strbp	59	37.981	Danio_rerio
ENSEBUG00000003089	-	71	40.260	ENSDNOG00000043330	STRBP	57	37.054	Dasypus_novemcinctus
ENSEBUG00000003089	-	67	41.722	ENSDORG00000012137	-	71	36.364	Dipodomys_ordii
ENSEBUG00000003089	-	71	40.260	ENSEASG00005020855	STRBP	54	44.056	Equus_asinus_asinus
ENSEBUG00000003089	-	71	40.260	ENSECAG00000008465	STRBP	54	44.056	Equus_caballus
ENSEBUG00000003089	-	57	62.745	ENSELUG00000006540	strbp	60	36.842	Esox_lucius
ENSEBUG00000003089	-	71	40.260	ENSFCAG00000004095	-	58	36.818	Felis_catus
ENSEBUG00000003089	-	71	40.260	ENSFCAG00000026303	-	57	36.818	Felis_catus
ENSEBUG00000003089	-	71	42.857	ENSFALG00000002031	STRBP	59	36.538	Ficedula_albicollis
ENSEBUG00000003089	-	70	40.260	ENSFDAG00000014136	-	56	38.426	Fukomys_damarensis
ENSEBUG00000003089	-	68	41.060	ENSGALG00000029927	STRBP	54	44.138	Gallus_gallus
ENSEBUG00000003089	-	67	39.691	ENSGAFG00000000257	-	54	40.206	Gambusia_affinis
ENSEBUG00000003089	-	69	40.299	ENSGAFG00000007543	strbp	61	38.389	Gambusia_affinis
ENSEBUG00000003089	-	71	36.058	ENSGACG00000017377	strbp	72	37.981	Gasterosteus_aculeatus
ENSEBUG00000003089	-	70	40.260	ENSGAGG00000018279	STRBP	57	36.493	Gopherus_agassizii
ENSEBUG00000003089	-	68	41.722	ENSGGOG00000003901	STRBP	63	42.857	Gorilla_gorilla
ENSEBUG00000003089	-	69	38.788	ENSHBUG00000004384	strbp	66	37.981	Haplochromis_burtoni
ENSEBUG00000003089	-	70	40.260	ENSHGLG00000014962	-	56	38.426	Heterocephalus_glaber_female
ENSEBUG00000003089	-	71	40.260	ENSHGLG00000018186	-	55	34.434	Heterocephalus_glaber_female
ENSEBUG00000003089	-	75	41.558	ENSHGLG00000019589	-	53	50.000	Heterocephalus_glaber_female
ENSEBUG00000003089	-	63	46.341	ENSHGLG00100004026	-	57	38.426	Heterocephalus_glaber_male
ENSEBUG00000003089	-	75	41.558	ENSHGLG00100005030	-	55	51.042	Heterocephalus_glaber_male
ENSEBUG00000003089	-	58	48.387	ENSHCOG00000002930	strbp	52	35.417	Hippocampus_comes
ENSEBUG00000003089	-	53	46.269	ENSIPUG00000015230	-	53	46.269	Ictalurus_punctatus
ENSEBUG00000003089	-	71	40.260	ENSSTOG00000004790	STRBP	57	37.500	Ictidomys_tridecemlineatus
ENSEBUG00000003089	-	71	40.260	ENSJJAG00000008449	Strbp	57	36.364	Jaculus_jaculus
ENSEBUG00000003089	-	67	39.196	ENSKMAG00000003479	-	54	39.196	Kryptolebias_marmoratus
ENSEBUG00000003089	-	71	38.806	ENSKMAG00000011192	strbp	60	38.389	Kryptolebias_marmoratus
ENSEBUG00000003089	-	51	43.609	ENSLBEG00000004741	strbp	56	43.609	Labrus_bergylta
ENSEBUG00000003089	-	63	47.154	ENSLACG00000018943	STRBP	55	37.321	Latimeria_chalumnae
ENSEBUG00000003089	-	65	44.715	ENSLOCG00000002814	strbp	52	38.503	Lepisosteus_oculatus
ENSEBUG00000003089	-	71	40.260	ENSLAFG00000012408	STRBP	57	37.500	Loxodonta_africana
ENSEBUG00000003089	-	71	40.260	ENSMFAG00000001745	STRBP	58	36.364	Macaca_fascicularis
ENSEBUG00000003089	-	71	40.260	ENSMMUG00000022919	STRBP	53	44.056	Macaca_mulatta
ENSEBUG00000003089	-	71	40.260	ENSMNEG00000045088	STRBP	55	44.056	Macaca_nemestrina
ENSEBUG00000003089	-	71	40.260	ENSMLEG00000043524	STRBP	58	36.364	Mandrillus_leucophaeus
ENSEBUG00000003089	-	63	45.600	ENSMAMG00000008774	strbp	57	38.725	Mastacembelus_armatus
ENSEBUG00000003089	-	69	38.788	ENSMZEG00005017152	strbp	60	38.389	Maylandia_zebra
ENSEBUG00000003089	-	68	41.060	ENSMGAG00000008101	STRBP	56	37.089	Meleagris_gallopavo
ENSEBUG00000003089	-	71	40.260	ENSMAUG00000016102	Strbp	56	37.736	Mesocricetus_auratus
ENSEBUG00000003089	-	63	46.341	ENSMICG00000000832	STRBP	55	44.056	Microcebus_murinus
ENSEBUG00000003089	-	63	47.154	ENSMOCG00000022231	Strbp	56	37.736	Microtus_ochrogaster
ENSEBUG00000003089	-	63	46.341	ENSMODG00000019732	-	59	36.019	Monodelphis_domestica
ENSEBUG00000003089	-	63	44.262	ENSMALG00000018050	strbp	51	39.459	Monopterus_albus
ENSEBUG00000003089	-	67	39.267	ENSMALG00000005608	-	54	39.267	Monopterus_albus
ENSEBUG00000003089	-	71	40.260	MGP_CAROLIEiJ_G0023520	Strbp	55	44.056	Mus_caroli
ENSEBUG00000003089	-	71	40.260	ENSMUSG00000026915	Strbp	55	44.056	Mus_musculus
ENSEBUG00000003089	-	63	46.341	MGP_PahariEiJ_G0024973	Strbp	51	44.056	Mus_pahari
ENSEBUG00000003089	-	71	40.260	MGP_SPRETEiJ_G0024440	-	55	44.056	Mus_spretus
ENSEBUG00000003089	-	71	40.260	ENSMPUG00000014119	STRBP	56	37.264	Mustela_putorius_furo
ENSEBUG00000003089	-	71	40.260	ENSMLUG00000003882	STRBP	57	36.792	Myotis_lucifugus
ENSEBUG00000003089	-	71	40.260	ENSNGAG00000014638	Strbp	57	36.842	Nannospalax_galili
ENSEBUG00000003089	-	69	38.788	ENSNBRG00000009092	strbp	56	44.138	Neolamprologus_brichardi
ENSEBUG00000003089	-	63	46.341	ENSNLEG00000017223	STRBP	53	38.144	Nomascus_leucogenys
ENSEBUG00000003089	-	64	40.260	ENSOPRG00000011479	STRBP	50	37.288	Ochotona_princeps
ENSEBUG00000003089	-	68	41.722	ENSODEG00000004632	STRBP	51	42.515	Octodon_degus
ENSEBUG00000003089	-	71	40.260	ENSODEG00000016775	-	55	38.426	Octodon_degus
ENSEBUG00000003089	-	69	38.788	ENSONIG00000003920	strbp	59	38.389	Oreochromis_niloticus
ENSEBUG00000003089	-	71	40.260	ENSOCUG00000009397	STRBP	57	36.792	Oryctolagus_cuniculus
ENSEBUG00000003089	-	69	40.299	ENSORLG00000010162	strbp	57	45.205	Oryzias_latipes
ENSEBUG00000003089	-	69	40.299	ENSORLG00020013015	strbp	57	45.205	Oryzias_latipes_hni
ENSEBUG00000003089	-	69	40.299	ENSORLG00015001430	strbp	56	44.138	Oryzias_latipes_hsok
ENSEBUG00000003089	-	71	40.299	ENSOMEG00000023400	strbp	56	44.138	Oryzias_melastigma
ENSEBUG00000003089	-	71	40.260	ENSOGAG00000014739	STRBP	57	36.818	Otolemur_garnettii
ENSEBUG00000003089	-	71	40.260	ENSOARG00000013864	-	56	36.744	Ovis_aries
ENSEBUG00000003089	-	71	40.260	ENSPPAG00000000242	STRBP	57	36.364	Pan_paniscus
ENSEBUG00000003089	-	71	40.260	ENSPPRG00000013039	STRBP	58	36.818	Panthera_pardus
ENSEBUG00000003089	-	71	40.260	ENSPTIG00000015831	STRBP	58	36.818	Panthera_tigris_altaica
ENSEBUG00000003089	-	71	40.260	ENSPTRG00000021346	STRBP	57	36.364	Pan_troglodytes
ENSEBUG00000003089	-	68	41.722	ENSPANG00000025850	STRBP	56	38.071	Papio_anubis
ENSEBUG00000003089	-	50	62.745	ENSPKIG00000021670	strbp	55	42.657	Paramormyrops_kingsleyae
ENSEBUG00000003089	-	63	46.341	ENSPKIG00000005217	-	53	40.526	Paramormyrops_kingsleyae
ENSEBUG00000003089	-	71	40.260	ENSPEMG00000022984	Strbp	56	37.736	Peromyscus_maniculatus_bairdii
ENSEBUG00000003089	-	63	46.341	ENSPCIG00000025588	STRBP	66	44.000	Phascolarctos_cinereus
ENSEBUG00000003089	-	69	40.299	ENSPFOG00000019696	strbp	57	44.138	Poecilia_formosa
ENSEBUG00000003089	-	69	40.299	ENSPLAG00000021681	strbp	60	38.389	Poecilia_latipinna
ENSEBUG00000003089	-	69	40.299	ENSPMEG00000009692	strbp	59	42.763	Poecilia_mexicana
ENSEBUG00000003089	-	69	40.299	ENSPREG00000008696	strbp	56	44.138	Poecilia_reticulata
ENSEBUG00000003089	-	71	40.260	ENSPPYG00000019589	STRBP	57	36.364	Pongo_abelii
ENSEBUG00000003089	-	65	46.429	ENSPCAG00000002872	STRBP	51	37.321	Procavia_capensis
ENSEBUG00000003089	-	71	40.260	ENSPCOG00000027563	STRBP	53	44.056	Propithecus_coquereli
ENSEBUG00000003089	-	71	40.260	ENSPVAG00000017607	STRBP	55	37.321	Pteropus_vampyrus
ENSEBUG00000003089	-	71	38.806	ENSPNYG00000012317	strbp	58	36.493	Pundamilia_nyererei
ENSEBUG00000003089	-	60	38.636	ENSPNAG00000029975	-	54	45.695	Pygocentrus_nattereri
ENSEBUG00000003089	-	63	44.715	ENSPNAG00000003471	strbp	54	39.572	Pygocentrus_nattereri
ENSEBUG00000003089	-	71	40.260	ENSRNOG00000010150	Strbp	55	44.056	Rattus_norvegicus
ENSEBUG00000003089	-	71	40.260	ENSRBIG00000044535	STRBP	50	52.083	Rhinopithecus_bieti
ENSEBUG00000003089	-	71	40.260	ENSRROG00000033417	STRBP	50	52.083	Rhinopithecus_roxellana
ENSEBUG00000003089	-	71	40.260	ENSSBOG00000003663	STRBP	57	36.364	Saimiri_boliviensis_boliviensis
ENSEBUG00000003089	-	63	46.341	ENSSHAG00000009918	STRBP	59	36.019	Sarcophilus_harrisii
ENSEBUG00000003089	-	63	43.902	ENSSFOG00015006972	STRBP	52	38.503	Scleropages_formosus
ENSEBUG00000003089	-	71	40.260	ENSSPUG00000001279	STRBP	59	36.967	Sphenodon_punctatus
ENSEBUG00000003089	-	71	38.806	ENSSPAG00000001187	strbp	59	36.681	Stegastes_partitus
ENSEBUG00000003089	-	71	40.260	ENSSSCG00000005582	STRBP	54	44.755	Sus_scrofa
ENSEBUG00000003089	-	68	41.060	ENSTGUG00000006984	STRBP	59	36.058	Taeniopygia_guttata
ENSEBUG00000003089	-	71	40.260	ENSTTRG00000016960	STRBP	56	37.264	Tursiops_truncatus
ENSEBUG00000003089	-	71	40.260	ENSUAMG00000015372	STRBP	57	37.264	Ursus_americanus
ENSEBUG00000003089	-	71	40.260	ENSUMAG00000003090	STRBP	56	37.264	Ursus_maritimus
ENSEBUG00000003089	-	70	40.260	ENSVPAG00000006002	STRBP	56	37.264	Vicugna_pacos
ENSEBUG00000003089	-	71	40.260	ENSVVUG00000009636	STRBP	54	44.755	Vulpes_vulpes
ENSEBUG00000003089	-	63	45.528	ENSXETG00000007590	strbp	52	38.144	Xenopus_tropicalis
ENSEBUG00000003089	-	71	40.299	ENSXCOG00000004987	strbp	56	36.842	Xiphophorus_couchianus
ENSEBUG00000003089	-	69	40.299	ENSXMAG00000001700	strbp	56	44.138	Xiphophorus_maculatus