EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003119 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 51943 bases
Position: chrFYBX02010277.1:2054197-2106139
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004407	MMR_HSR1	PF01926.23	3.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004843	-	4143	-	ENSEBUP00000004407	678 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003119's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003119	lsg1	85	57.048	ENSG00000041802	LSG1	88	57.912	Homo_sapiens
ENSEBUG00000003119	lsg1	85	57.143	ENSAPOG00000009694	lsg1	88	57.461	Acanthochromis_polyacanthus
ENSEBUG00000003119	lsg1	85	56.427	ENSAMEG00000009343	LSG1	89	57.025	Ailuropoda_melanoleuca
ENSEBUG00000003119	lsg1	85	57.858	ENSACIG00000012406	lsg1	88	58.031	Amphilophus_citrinellus
ENSEBUG00000003119	lsg1	85	55.348	ENSAOCG00000016066	lsg1	88	56.870	Amphiprion_ocellaris
ENSEBUG00000003119	lsg1	85	55.688	ENSAPEG00000003252	lsg1	88	56.446	Amphiprion_percula
ENSEBUG00000003119	lsg1	85	57.216	ENSATEG00000011794	lsg1	88	57.216	Anabas_testudineus
ENSEBUG00000003119	lsg1	84	56.229	ENSACAG00000004222	LSG1	93	56.229	Anolis_carolinensis
ENSEBUG00000003119	lsg1	85	55.941	ENSANAG00000021153	LSG1	88	57.576	Aotus_nancymaae
ENSEBUG00000003119	lsg1	85	54.319	ENSACLG00000000520	lsg1	88	54.651	Astatotilapia_calliptera
ENSEBUG00000003119	lsg1	86	54.484	ENSAMXG00000008271	lsg1	89	55.690	Astyanax_mexicanus
ENSEBUG00000003119	lsg1	85	56.219	ENSBTAG00000008461	LSG1	88	57.358	Bos_taurus
ENSEBUG00000003119	lsg1	57	47.170	WBGene00016907	C53H9.2	83	45.506	Caenorhabditis_elegans
ENSEBUG00000003119	lsg1	85	55.611	ENSCJAG00000013962	LSG1	88	56.784	Callithrix_jacchus
ENSEBUG00000003119	lsg1	85	53.630	ENSCAFG00000013445	LSG1	93	54.698	Canis_familiaris
ENSEBUG00000003119	lsg1	85	54.243	ENSCAFG00020002216	LSG1	94	55.330	Canis_lupus_dingo
ENSEBUG00000003119	lsg1	85	57.095	ENSCHIG00000015769	LSG1	89	57.238	Capra_hircus
ENSEBUG00000003119	lsg1	85	56.208	ENSTSYG00000001447	LSG1	88	56.566	Carlito_syrichta
ENSEBUG00000003119	lsg1	85	55.119	ENSCAPG00000009856	LSG1	93	55.290	Cavia_aperea
ENSEBUG00000003119	lsg1	85	54.785	ENSCCAG00000035744	LSG1	88	56.114	Cebus_capucinus
ENSEBUG00000003119	lsg1	85	57.096	ENSCATG00000042060	LSG1	88	57.286	Cercocebus_atys
ENSEBUG00000003119	lsg1	85	56.436	ENSCSAG00000008796	LSG1	81	57.789	Chlorocebus_sabaeus
ENSEBUG00000003119	lsg1	85	55.740	ENSCPBG00000015941	LSG1	74	57.022	Chrysemys_picta_bellii
ENSEBUG00000003119	lsg1	69	46.809	ENSCING00000007079	-	85	46.809	Ciona_intestinalis
ENSEBUG00000003119	lsg1	63	54.023	ENSCSAVG00000002514	-	82	54.023	Ciona_savignyi
ENSEBUG00000003119	lsg1	85	56.271	ENSCANG00000030709	LSG1	88	57.286	Colobus_angolensis_palliatus
ENSEBUG00000003119	lsg1	85	56.552	ENSCGRG00001019846	Lsg1	88	56.655	Cricetulus_griseus_chok1gshd
ENSEBUG00000003119	lsg1	85	56.552	ENSCGRG00000014617	Lsg1	88	56.655	Cricetulus_griseus_crigri
ENSEBUG00000003119	lsg1	85	55.143	ENSCSEG00000008522	lsg1	88	54.822	Cynoglossus_semilaevis
ENSEBUG00000003119	lsg1	85	57.858	ENSCVAG00000002484	lsg1	88	57.686	Cyprinodon_variegatus
ENSEBUG00000003119	lsg1	85	55.593	ENSDARG00000015352	lsg1	88	55.932	Danio_rerio
ENSEBUG00000003119	lsg1	85	57.458	ENSDNOG00000006224	LSG1	88	57.458	Dasypus_novemcinctus
ENSEBUG00000003119	lsg1	86	44.949	FBgn0266284	Ns3	89	45.238	Drosophila_melanogaster
ENSEBUG00000003119	lsg1	73	49.904	ENSETEG00000003888	LSG1	78	50.285	Echinops_telfairi
ENSEBUG00000003119	lsg1	85	56.711	ENSEASG00005000678	LSG1	88	56.879	Equus_asinus_asinus
ENSEBUG00000003119	lsg1	85	56.260	ENSECAG00000017659	LSG1	88	56.879	Equus_caballus
ENSEBUG00000003119	lsg1	72	54.688	ENSEEUG00000015217	LSG1	75	54.404	Erinaceus_europaeus
ENSEBUG00000003119	lsg1	85	55.095	ENSELUG00000023973	lsg1	88	54.844	Esox_lucius
ENSEBUG00000003119	lsg1	85	55.966	ENSFCAG00000024957	LSG1	88	56.208	Felis_catus
ENSEBUG00000003119	lsg1	85	55.351	ENSFALG00000007210	LSG1	90	55.372	Ficedula_albicollis
ENSEBUG00000003119	lsg1	85	56.633	ENSFDAG00000017373	LSG1	88	56.559	Fukomys_damarensis
ENSEBUG00000003119	lsg1	85	55.952	ENSFHEG00000003680	lsg1	88	55.952	Fundulus_heteroclitus
ENSEBUG00000003119	lsg1	73	60.847	ENSGMOG00000015834	lsg1	88	52.778	Gadus_morhua
ENSEBUG00000003119	lsg1	85	54.000	ENSGALG00000007058	LSG1	79	54.470	Gallus_gallus
ENSEBUG00000003119	lsg1	85	56.894	ENSGAFG00000015831	lsg1	88	56.870	Gambusia_affinis
ENSEBUG00000003119	lsg1	85	56.304	ENSGACG00000009323	lsg1	88	56.304	Gasterosteus_aculeatus
ENSEBUG00000003119	lsg1	85	56.711	ENSGGOG00000000520	LSG1	88	57.576	Gorilla_gorilla
ENSEBUG00000003119	lsg1	85	55.387	ENSHBUG00000005659	lsg1	88	55.724	Haplochromis_burtoni
ENSEBUG00000003119	lsg1	85	55.938	ENSHGLG00000017390	LSG1	88	56.529	Heterocephalus_glaber_female
ENSEBUG00000003119	lsg1	85	55.938	ENSHGLG00100018587	LSG1	88	56.529	Heterocephalus_glaber_male
ENSEBUG00000003119	lsg1	85	55.556	ENSHCOG00000016848	lsg1	88	55.556	Hippocampus_comes
ENSEBUG00000003119	lsg1	85	57.019	ENSIPUG00000008631	lsg1	88	57.612	Ictalurus_punctatus
ENSEBUG00000003119	lsg1	70	55.332	ENSSTOG00000010234	LSG1	90	56.531	Ictidomys_tridecemlineatus
ENSEBUG00000003119	lsg1	84	57.922	ENSJJAG00000015513	Lsg1	88	58.305	Jaculus_jaculus
ENSEBUG00000003119	lsg1	85	56.131	ENSKMAG00000009681	lsg1	88	56.477	Kryptolebias_marmoratus
ENSEBUG00000003119	lsg1	85	54.974	ENSLBEG00000024261	lsg1	87	55.497	Labrus_bergylta
ENSEBUG00000003119	lsg1	85	53.667	ENSLACG00000013399	LSG1	89	53.987	Latimeria_chalumnae
ENSEBUG00000003119	lsg1	85	56.926	ENSLOCG00000004918	lsg1	88	57.119	Lepisosteus_oculatus
ENSEBUG00000003119	lsg1	85	56.610	ENSLAFG00000012919	-	88	56.803	Loxodonta_africana
ENSEBUG00000003119	lsg1	85	56.766	ENSMFAG00000039903	LSG1	88	56.951	Macaca_fascicularis
ENSEBUG00000003119	lsg1	85	56.322	ENSMMUG00000010708	LSG1	88	57.956	Macaca_mulatta
ENSEBUG00000003119	lsg1	85	56.766	ENSMNEG00000031538	LSG1	88	56.784	Macaca_nemestrina
ENSEBUG00000003119	lsg1	85	56.158	ENSMLEG00000041184	LSG1	88	57.789	Mandrillus_leucophaeus
ENSEBUG00000003119	lsg1	85	56.529	ENSMAMG00000000470	lsg1	88	56.529	Mastacembelus_armatus
ENSEBUG00000003119	lsg1	85	55.387	ENSMZEG00005017865	lsg1	88	55.724	Maylandia_zebra
ENSEBUG00000003119	lsg1	85	53.488	ENSMGAG00000007050	LSG1	99	54.167	Meleagris_gallopavo
ENSEBUG00000003119	lsg1	76	56.167	ENSMAUG00000016976	Lsg1	80	56.309	Mesocricetus_auratus
ENSEBUG00000003119	lsg1	85	58.206	ENSMICG00000049087	LSG1	88	57.336	Microcebus_murinus
ENSEBUG00000003119	lsg1	85	56.529	ENSMOCG00000022136	Lsg1	88	56.261	Microtus_ochrogaster
ENSEBUG00000003119	lsg1	72	63.259	ENSMMOG00000008884	lsg1	87	54.799	Mola_mola
ENSEBUG00000003119	lsg1	85	51.252	ENSMODG00000019828	LSG1	88	51.419	Monodelphis_domestica
ENSEBUG00000003119	lsg1	85	56.944	MGP_CAROLIEiJ_G0020648	Lsg1	88	57.612	Mus_caroli
ENSEBUG00000003119	lsg1	85	56.729	ENSMUSG00000022538	Lsg1	88	56.853	Mus_musculus
ENSEBUG00000003119	lsg1	85	55.932	MGP_PahariEiJ_G0016352	Lsg1	88	56.324	Mus_pahari
ENSEBUG00000003119	lsg1	85	56.143	MGP_SPRETEiJ_G0021544	Lsg1	88	57.168	Mus_spretus
ENSEBUG00000003119	lsg1	85	56.500	ENSMPUG00000003734	LSG1	89	56.478	Mustela_putorius_furo
ENSEBUG00000003119	lsg1	85	56.197	ENSMLUG00000012548	LSG1	89	56.122	Myotis_lucifugus
ENSEBUG00000003119	lsg1	85	55.479	ENSNGAG00000021872	Lsg1	88	56.014	Nannospalax_galili
ENSEBUG00000003119	lsg1	85	56.882	ENSNLEG00000008293	LSG1	88	58.081	Nomascus_leucogenys
ENSEBUG00000003119	lsg1	66	56.131	ENSMEUG00000009041	-	84	55.670	Notamacropus_eugenii
ENSEBUG00000003119	lsg1	85	56.500	ENSONIG00000002635	lsg1	88	57.191	Oreochromis_niloticus
ENSEBUG00000003119	lsg1	85	55.973	ENSOANG00000012742	LSG1	92	55.973	Ornithorhynchus_anatinus
ENSEBUG00000003119	lsg1	85	56.397	ENSOCUG00000004817	LSG1	88	56.566	Oryctolagus_cuniculus
ENSEBUG00000003119	lsg1	85	57.592	ENSORLG00000007695	lsg1	88	57.592	Oryzias_latipes
ENSEBUG00000003119	lsg1	85	57.491	ENSORLG00020016286	lsg1	88	57.491	Oryzias_latipes_hni
ENSEBUG00000003119	lsg1	85	57.417	ENSORLG00015012025	lsg1	87	57.417	Oryzias_latipes_hsok
ENSEBUG00000003119	lsg1	85	56.620	ENSOMEG00000022379	lsg1	88	56.098	Oryzias_melastigma
ENSEBUG00000003119	lsg1	85	56.928	ENSOGAG00000003475	LSG1	88	57.238	Otolemur_garnettii
ENSEBUG00000003119	lsg1	85	56.033	ENSOARG00000020403	LSG1	89	57.641	Ovis_aries
ENSEBUG00000003119	lsg1	85	57.983	ENSPPAG00000029271	LSG1	88	57.833	Pan_paniscus
ENSEBUG00000003119	lsg1	85	55.150	ENSPPRG00000010281	LSG1	89	55.390	Panthera_pardus
ENSEBUG00000003119	lsg1	85	55.798	ENSPTIG00000010789	LSG1	88	56.040	Panthera_tigris_altaica
ENSEBUG00000003119	lsg1	85	57.815	ENSPTRG00000015760	LSG1	88	57.667	Pan_troglodytes
ENSEBUG00000003119	lsg1	85	56.931	ENSPANG00000018249	LSG1	88	57.119	Papio_anubis
ENSEBUG00000003119	lsg1	85	55.326	ENSPKIG00000002895	lsg1	89	56.131	Paramormyrops_kingsleyae
ENSEBUG00000003119	lsg1	83	54.483	ENSPSIG00000009821	LSG1	89	54.483	Pelodiscus_sinensis
ENSEBUG00000003119	lsg1	86	55.068	ENSPMGG00000000931	lsg1	94	54.899	Periophthalmus_magnuspinnatus
ENSEBUG00000003119	lsg1	85	56.734	ENSPEMG00000012082	-	88	56.197	Peromyscus_maniculatus_bairdii
ENSEBUG00000003119	lsg1	85	58.306	ENSPMAG00000007451	lsg1	89	58.306	Petromyzon_marinus
ENSEBUG00000003119	lsg1	85	55.941	ENSPCIG00000013890	LSG1	72	55.528	Phascolarctos_cinereus
ENSEBUG00000003119	lsg1	85	56.250	ENSPFOG00000021882	lsg1	88	56.419	Poecilia_formosa
ENSEBUG00000003119	lsg1	85	55.405	ENSPLAG00000019536	lsg1	88	55.574	Poecilia_latipinna
ENSEBUG00000003119	lsg1	86	55.150	ENSPMEG00000017281	lsg1	90	55.116	Poecilia_mexicana
ENSEBUG00000003119	lsg1	85	46.555	ENSPREG00000006048	lsg1	88	47.395	Poecilia_reticulata
ENSEBUG00000003119	lsg1	77	56.909	ENSPPYG00000014425	LSG1	88	57.404	Pongo_abelii
ENSEBUG00000003119	lsg1	75	48.295	ENSPCAG00000005511	LSG1	78	49.053	Procavia_capensis
ENSEBUG00000003119	lsg1	85	56.616	ENSPCOG00000012360	LSG1	88	56.260	Propithecus_coquereli
ENSEBUG00000003119	lsg1	85	54.319	ENSPNYG00000021994	lsg1	88	54.651	Pundamilia_nyererei
ENSEBUG00000003119	lsg1	85	56.061	ENSPNAG00000015533	lsg1	89	56.061	Pygocentrus_nattereri
ENSEBUG00000003119	lsg1	85	56.061	ENSRNOG00000001727	Lsg1	88	56.926	Rattus_norvegicus
ENSEBUG00000003119	lsg1	85	56.694	ENSRBIG00000029053	LSG1	88	57.886	Rhinopithecus_bieti
ENSEBUG00000003119	lsg1	85	56.694	ENSRROG00000037702	LSG1	88	57.886	Rhinopithecus_roxellana
ENSEBUG00000003119	lsg1	63	43.056	YGL099W	LSG1	58	45.497	Saccharomyces_cerevisiae
ENSEBUG00000003119	lsg1	85	55.501	ENSSBOG00000034938	LSG1	88	57.119	Saimiri_boliviensis_boliviensis
ENSEBUG00000003119	lsg1	74	56.250	ENSSHAG00000003487	LSG1	99	57.570	Sarcophilus_harrisii
ENSEBUG00000003119	lsg1	85	57.094	ENSSFOG00015008955	lsg1	88	57.607	Scleropages_formosus
ENSEBUG00000003119	lsg1	85	57.560	ENSSDUG00000004622	lsg1	88	56.303	Seriola_dumerili
ENSEBUG00000003119	lsg1	85	56.799	ENSSLDG00000010869	lsg1	88	56.799	Seriola_lalandi_dorsalis
ENSEBUG00000003119	lsg1	69	65.217	ENSSARG00000012981	LSG1	71	65.217	Sorex_araneus
ENSEBUG00000003119	lsg1	85	55.721	ENSSPUG00000016347	LSG1	87	58.577	Sphenodon_punctatus
ENSEBUG00000003119	lsg1	85	56.000	ENSSPAG00000005508	lsg1	88	57.391	Stegastes_partitus
ENSEBUG00000003119	lsg1	85	54.849	ENSSSCG00000011827	LSG1	88	55.236	Sus_scrofa
ENSEBUG00000003119	lsg1	85	53.974	ENSTGUG00000009068	LSG1	99	54.333	Taeniopygia_guttata
ENSEBUG00000003119	lsg1	85	51.433	ENSTRUG00000017380	lsg1	87	51.939	Takifugu_rubripes
ENSEBUG00000003119	lsg1	85	56.164	ENSTNIG00000015570	lsg1	88	56.048	Tetraodon_nigroviridis
ENSEBUG00000003119	lsg1	75	59.958	ENSTTRG00000000559	LSG1	79	59.958	Tursiops_truncatus
ENSEBUG00000003119	lsg1	85	57.333	ENSUAMG00000012454	LSG1	89	57.167	Ursus_americanus
ENSEBUG00000003119	lsg1	85	57.333	ENSUMAG00000000855	LSG1	89	57.167	Ursus_maritimus
ENSEBUG00000003119	lsg1	85	52.736	ENSVPAG00000012400	LSG1	93	52.843	Vicugna_pacos
ENSEBUG00000003119	lsg1	85	54.013	ENSVVUG00000008956	LSG1	91	55.102	Vulpes_vulpes
ENSEBUG00000003119	lsg1	85	55.369	ENSXETG00000003451	lsg1	89	54.958	Xenopus_tropicalis
ENSEBUG00000003119	lsg1	85	55.330	ENSXCOG00000003239	lsg1	88	55.330	Xiphophorus_couchianus
ENSEBUG00000003119	lsg1	85	55.345	ENSXMAG00000005536	lsg1	88	55.500	Xiphophorus_maculatus