EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000003129 (Gene tree)
Gene ID: -
Gene Symbol: srsf4 (1 of many)
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 15489 bases
Position: chrFYBX02010694.1:1415930-1431418
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004442	RRM_1	PF00076.22	1.2e-19	1	2
ENSEBUP00000004442	RRM_1	PF00076.22	1.2e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004880	-	657	-	ENSEBUP00000004442	218 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000003129	srsf4	69	52.532	ENSEBUG00000006229	srsf5b	61	51.235
ENSEBUG00000003129	srsf4	74	38.272	ENSEBUG00000001322	-	53	38.406
ENSEBUG00000003129	srsf4	55	46.281	ENSEBUG00000009582	-	52	45.161
ENSEBUG00000003129	srsf4	68	53.049	ENSEBUG00000001681	srsf4	60	54.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003129	srsf4	69	63.291	ENSG00000116350	SRSF4	58	96.154	Homo_sapiens
ENSEBUG00000003129	srsf4	69	59.146	ENSAPOG00000023399	-	54	59.146	Acanthochromis_polyacanthus
ENSEBUG00000003129	srsf4	69	62.987	ENSACIG00000018649	srsf4	75	59.596	Amphilophus_citrinellus
ENSEBUG00000003129	srsf4	56	65.600	ENSAOCG00000005997	srsf4	80	60.714	Amphiprion_ocellaris
ENSEBUG00000003129	srsf4	69	56.173	ENSATEG00000005680	srsf4	54	59.259	Anabas_testudineus
ENSEBUG00000003129	srsf4	69	58.599	ENSACLG00000003395	srsf4	60	60.000	Astatotilapia_calliptera
ENSEBUG00000003129	srsf4	69	60.625	ENSAMXG00000034811	srsf4	61	60.625	Astyanax_mexicanus
ENSEBUG00000003129	srsf4	70	37.500	WBGene00004698	rsp-1	84	40.000	Caenorhabditis_elegans
ENSEBUG00000003129	srsf4	68	43.094	ENSCING00000024718	-	52	45.506	Ciona_intestinalis
ENSEBUG00000003129	srsf4	67	45.399	ENSCING00000011362	-	58	47.561	Ciona_intestinalis
ENSEBUG00000003129	srsf4	66	46.995	ENSCING00000012370	-	63	48.087	Ciona_intestinalis
ENSEBUG00000003129	srsf4	65	44.848	ENSCING00000020631	-	72	44.318	Ciona_intestinalis
ENSEBUG00000003129	srsf4	68	50.633	ENSCSAVG00000002581	-	64	49.153	Ciona_savignyi
ENSEBUG00000003129	srsf4	69	56.707	ENSCSEG00000010058	srsf4	55	61.364	Cynoglossus_semilaevis
ENSEBUG00000003129	srsf4	68	51.136	FBgn0004587	B52	81	53.211	Drosophila_melanogaster
ENSEBUG00000003129	srsf4	63	61.146	ENSELUG00000017551	srsf4	74	61.616	Esox_lucius
ENSEBUG00000003129	srsf4	69	60.000	ENSFHEG00000007472	srsf4	56	64.286	Fundulus_heteroclitus
ENSEBUG00000003129	srsf4	68	62.581	ENSGMOG00000012906	srsf4	50	62.112	Gadus_morhua
ENSEBUG00000003129	srsf4	69	61.392	ENSGAFG00000018496	srsf4	54	64.085	Gambusia_affinis
ENSEBUG00000003129	srsf4	69	58.861	ENSHCOG00000012540	srsf4	54	63.946	Hippocampus_comes
ENSEBUG00000003129	srsf4	69	61.039	ENSKMAG00000013631	srsf4	73	51.596	Kryptolebias_marmoratus
ENSEBUG00000003129	srsf4	69	62.092	ENSMAMG00000004888	srsf4	60	60.377	Mastacembelus_armatus
ENSEBUG00000003129	srsf4	69	58.599	ENSMZEG00005026275	srsf4	60	60.000	Maylandia_zebra
ENSEBUG00000003129	srsf4	69	62.338	ENSMMOG00000013653	srsf4	57	58.065	Mola_mola
ENSEBUG00000003129	srsf4	70	61.146	ENSMALG00000013392	srsf4	59	60.625	Monopterus_albus
ENSEBUG00000003129	srsf4	69	55.625	ENSNLEG00000030787	-	55	55.625	Nomascus_leucogenys
ENSEBUG00000003129	srsf4	69	60.256	ENSORLG00020016052	srsf4	58	60.377	Oryzias_latipes_hni
ENSEBUG00000003129	srsf4	69	60.256	ENSORLG00015007566	srsf4	62	60.377	Oryzias_latipes_hsok
ENSEBUG00000003129	srsf4	69	55.090	ENSPMGG00000013436	srsf4	80	57.009	Periophthalmus_magnuspinnatus
ENSEBUG00000003129	srsf4	68	60.759	ENSPMAG00000009397	srsf4	60	62.733	Petromyzon_marinus
ENSEBUG00000003129	srsf4	69	61.392	ENSPLAG00000008812	srsf4	52	64.789	Poecilia_latipinna
ENSEBUG00000003129	srsf4	69	61.783	ENSSFOG00015020292	srsf4	66	59.341	Scleropages_formosus
ENSEBUG00000003129	srsf4	69	47.097	ENSSLDG00000009745	srsf4	53	48.718	Seriola_lalandi_dorsalis
ENSEBUG00000003129	srsf4	69	61.290	ENSSPAG00000014538	srsf4	58	66.667	Stegastes_partitus
ENSEBUG00000003129	srsf4	69	62.092	ENSTRUG00000011891	srsf4	55	55.814	Takifugu_rubripes
ENSEBUG00000003129	srsf4	69	62.745	ENSXCOG00000018826	srsf4	80	51.351	Xiphophorus_couchianus