EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003170 (Gene tree)
Gene ID: -
Gene Symbol: snrpd1
Alias: CHUNP6882|fk26a01|wu:fk26a01|zgc:86929
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 28312 bases
Position: chrFYBX02010424.1:904398-932709
Accession: ZDB-GENE-020419-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004503	LSM	PF01423.22	1.1e-18	1	1
ENSEBUP00000004487	LSM	PF01423.22	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004941	-	2944	-	ENSEBUP00000004503	101 (aa)	-	-
ENSEBUT00000004926	-	2560	-	ENSEBUP00000004487	119 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003170's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003170	snrpd1	94	92.857	ENSG00000167088	SNRPD1	94	92.857	Homo_sapiens
ENSEBUG00000003170	snrpd1	94	92.857	ENSAPOG00000019446	snrpd1	61	92.857	Acanthochromis_polyacanthus
ENSEBUG00000003170	snrpd1	92	90.909	ENSAMEG00000002576	SNRPD1	94	90.909	Ailuropoda_melanoleuca
ENSEBUG00000003170	snrpd1	88	92.381	ENSACIG00000011263	snrpd1	94	92.381	Amphilophus_citrinellus
ENSEBUG00000003170	snrpd1	94	92.857	ENSAOCG00000007406	snrpd1	94	92.857	Amphiprion_ocellaris
ENSEBUG00000003170	snrpd1	88	92.381	ENSAPEG00000012539	SNRPD1	94	92.381	Amphiprion_percula
ENSEBUG00000003170	snrpd1	94	88.393	ENSAPEG00000014961	snrpd1	94	88.393	Amphiprion_percula
ENSEBUG00000003170	snrpd1	94	92.857	ENSATEG00000014399	snrpd1	94	92.857	Anabas_testudineus
ENSEBUG00000003170	snrpd1	91	92.593	ENSAPLG00000012256	SNRPD1	91	92.593	Anas_platyrhynchos
ENSEBUG00000003170	snrpd1	94	92.857	ENSACAG00000006364	SNRPD1	94	92.857	Anolis_carolinensis
ENSEBUG00000003170	snrpd1	94	92.857	ENSANAG00000025641	SNRPD1	94	92.857	Aotus_nancymaae
ENSEBUG00000003170	snrpd1	88	92.381	ENSACLG00000017406	snrpd1	94	92.381	Astatotilapia_calliptera
ENSEBUG00000003170	snrpd1	96	91.753	ENSAMXG00000004589	snrpd1	94	92.857	Astyanax_mexicanus
ENSEBUG00000003170	snrpd1	91	86.957	ENSBTAG00000055316	-	85	82.828	Bos_taurus
ENSEBUG00000003170	snrpd1	93	89.362	ENSBTAG00000012376	-	72	89.583	Bos_taurus
ENSEBUG00000003170	snrpd1	94	92.857	ENSBTAG00000008292	SNRPD1	94	92.857	Bos_taurus
ENSEBUG00000003170	snrpd1	94	89.286	ENSBTAG00000047266	-	94	89.286	Bos_taurus
ENSEBUG00000003170	snrpd1	87	79.545	WBGene00004916	snr-3	80	75.248	Caenorhabditis_elegans
ENSEBUG00000003170	snrpd1	94	92.857	ENSCJAG00000042955	SNRPD1	94	92.857	Callithrix_jacchus
ENSEBUG00000003170	snrpd1	94	92.857	ENSCAFG00000018247	SNRPD1	94	92.857	Canis_familiaris
ENSEBUG00000003170	snrpd1	93	91.489	ENSCAFG00020015914	SNRPD1	74	91.579	Canis_lupus_dingo
ENSEBUG00000003170	snrpd1	94	90.179	ENSCHIG00000005557	SNRPD1	92	91.818	Capra_hircus
ENSEBUG00000003170	snrpd1	94	92.857	ENSTSYG00000030028	SNRPD1	94	92.857	Carlito_syrichta
ENSEBUG00000003170	snrpd1	91	91.667	ENSCAPG00000008103	SNRPD1	93	91.667	Cavia_aperea
ENSEBUG00000003170	snrpd1	94	92.857	ENSCPOG00000004679	SNRPD1	94	92.857	Cavia_porcellus
ENSEBUG00000003170	snrpd1	93	89.362	ENSCCAG00000005390	-	87	84.466	Cebus_capucinus
ENSEBUG00000003170	snrpd1	94	92.857	ENSCCAG00000032658	SNRPD1	94	92.857	Cebus_capucinus
ENSEBUG00000003170	snrpd1	94	91.964	ENSCCAG00000020611	-	94	91.964	Cebus_capucinus
ENSEBUG00000003170	snrpd1	94	91.071	ENSCCAG00000016652	-	94	91.071	Cebus_capucinus
ENSEBUG00000003170	snrpd1	94	92.857	ENSCATG00000039978	SNRPD1	94	92.857	Cercocebus_atys
ENSEBUG00000003170	snrpd1	94	92.857	ENSCLAG00000008691	SNRPD1	94	92.857	Chinchilla_lanigera
ENSEBUG00000003170	snrpd1	94	92.857	ENSCSAG00000017654	SNRPD1	94	92.857	Chlorocebus_sabaeus
ENSEBUG00000003170	snrpd1	99	88.000	ENSCPBG00000023143	SNRPD1	94	92.857	Chrysemys_picta_bellii
ENSEBUG00000003170	snrpd1	85	87.209	ENSCING00000024100	-	85	76.415	Ciona_intestinalis
ENSEBUG00000003170	snrpd1	86	86.207	ENSCSAVG00000004578	-	81	77.228	Ciona_savignyi
ENSEBUG00000003170	snrpd1	93	67.021	ENSCGRG00001009945	-	92	65.049	Cricetulus_griseus_chok1gshd
ENSEBUG00000003170	snrpd1	94	92.857	ENSCGRG00001021055	-	94	92.857	Cricetulus_griseus_chok1gshd
ENSEBUG00000003170	snrpd1	93	67.021	ENSCGRG00000006224	-	92	65.049	Cricetulus_griseus_crigri
ENSEBUG00000003170	snrpd1	94	92.857	ENSCGRG00000000490	-	94	92.857	Cricetulus_griseus_crigri
ENSEBUG00000003170	snrpd1	96	88.660	ENSCSEG00000018141	snrpd1	87	85.437	Cynoglossus_semilaevis
ENSEBUG00000003170	snrpd1	94	92.857	ENSCVAG00000000534	snrpd1	94	92.857	Cyprinodon_variegatus
ENSEBUG00000003170	snrpd1	94	92.857	ENSDARG00000011648	snrpd1	94	92.857	Danio_rerio
ENSEBUG00000003170	snrpd1	94	92.857	ENSDNOG00000040310	SNRPD1	94	92.857	Dasypus_novemcinctus
ENSEBUG00000003170	snrpd1	94	92.857	ENSDORG00000008349	Snrpd1	94	92.857	Dipodomys_ordii
ENSEBUG00000003170	snrpd1	93	80.851	FBgn0261933	SmD1	81	77.228	Drosophila_melanogaster
ENSEBUG00000003170	snrpd1	68	91.358	ENSETEG00000011689	SNRPD1	68	91.358	Echinops_telfairi
ENSEBUG00000003170	snrpd1	88	92.381	ENSEASG00005002433	SNRPD1	94	92.381	Equus_asinus_asinus
ENSEBUG00000003170	snrpd1	88	92.381	ENSECAG00000014373	SNRPD1	94	92.381	Equus_caballus
ENSEBUG00000003170	snrpd1	88	91.011	ENSEEUG00000004987	SNRPD1	100	91.011	Erinaceus_europaeus
ENSEBUG00000003170	snrpd1	97	87.755	ENSELUG00000000088	snrpd1	82	87.755	Esox_lucius
ENSEBUG00000003170	snrpd1	94	92.857	ENSFCAG00000012352	SNRPD1	94	92.857	Felis_catus
ENSEBUG00000003170	snrpd1	88	92.381	ENSFALG00000002646	SNRPD1	94	92.381	Ficedula_albicollis
ENSEBUG00000003170	snrpd1	94	92.857	ENSGMOG00000015607	snrpd1	94	92.857	Gadus_morhua
ENSEBUG00000003170	snrpd1	94	92.857	ENSGALG00000041334	SNRPD1	94	92.857	Gallus_gallus
ENSEBUG00000003170	snrpd1	94	92.857	ENSGAFG00000011171	snrpd1	94	92.857	Gambusia_affinis
ENSEBUG00000003170	snrpd1	94	92.857	ENSGACG00000005201	SNRPD1	94	92.857	Gasterosteus_aculeatus
ENSEBUG00000003170	snrpd1	94	92.857	ENSGAGG00000011197	SNRPD1	94	92.857	Gopherus_agassizii
ENSEBUG00000003170	snrpd1	94	92.857	ENSGGOG00000041053	SNRPD1	94	92.857	Gorilla_gorilla
ENSEBUG00000003170	snrpd1	93	86.170	ENSGGOG00000026706	-	80	86.458	Gorilla_gorilla
ENSEBUG00000003170	snrpd1	94	92.857	ENSHBUG00000003236	snrpd1	94	92.857	Haplochromis_burtoni
ENSEBUG00000003170	snrpd1	94	92.857	ENSHGLG00000007152	SNRPD1	94	92.857	Heterocephalus_glaber_female
ENSEBUG00000003170	snrpd1	94	92.857	ENSHGLG00100008618	SNRPD1	94	92.857	Heterocephalus_glaber_male
ENSEBUG00000003170	snrpd1	94	92.857	ENSIPUG00000003576	snrpd1	94	92.857	Ictalurus_punctatus
ENSEBUG00000003170	snrpd1	94	92.857	ENSSTOG00000000485	SNRPD1	94	92.857	Ictidomys_tridecemlineatus
ENSEBUG00000003170	snrpd1	94	92.857	ENSJJAG00000017698	Snrpd1	94	92.857	Jaculus_jaculus
ENSEBUG00000003170	snrpd1	94	92.857	ENSKMAG00000005987	snrpd1	94	92.857	Kryptolebias_marmoratus
ENSEBUG00000003170	snrpd1	94	92.857	ENSLBEG00000003327	snrpd1	94	92.857	Labrus_bergylta
ENSEBUG00000003170	snrpd1	94	92.857	ENSLACG00000001955	SNRPD1	94	92.857	Latimeria_chalumnae
ENSEBUG00000003170	snrpd1	92	90.909	ENSLOCG00000002003	snrpd1	94	90.909	Lepisosteus_oculatus
ENSEBUG00000003170	snrpd1	93	90.991	ENSLAFG00000005819	SNRPD1	94	90.991	Loxodonta_africana
ENSEBUG00000003170	snrpd1	94	92.857	ENSMFAG00000042080	SNRPD1	94	92.857	Macaca_fascicularis
ENSEBUG00000003170	snrpd1	90	92.523	ENSMMUG00000003992	SNRPD1	91	92.523	Macaca_mulatta
ENSEBUG00000003170	snrpd1	94	92.857	ENSMNEG00000041296	SNRPD1	94	92.857	Macaca_nemestrina
ENSEBUG00000003170	snrpd1	94	92.857	ENSMLEG00000028659	SNRPD1	94	92.857	Mandrillus_leucophaeus
ENSEBUG00000003170	snrpd1	94	92.857	ENSMAMG00000012971	snrpd1	94	92.857	Mastacembelus_armatus
ENSEBUG00000003170	snrpd1	94	92.857	ENSMZEG00005004685	snrpd1	94	92.857	Maylandia_zebra
ENSEBUG00000003170	snrpd1	91	92.593	ENSMGAG00000011598	SNRPD1	89	92.593	Meleagris_gallopavo
ENSEBUG00000003170	snrpd1	93	76.596	ENSMAUG00000016467	-	91	73.267	Mesocricetus_auratus
ENSEBUG00000003170	snrpd1	94	89.474	ENSMAUG00000006829	-	62	89.474	Mesocricetus_auratus
ENSEBUG00000003170	snrpd1	93	76.596	ENSMAUG00000016502	-	91	73.267	Mesocricetus_auratus
ENSEBUG00000003170	snrpd1	94	92.857	ENSMICG00000044066	SNRPD1	94	92.857	Microcebus_murinus
ENSEBUG00000003170	snrpd1	94	92.857	ENSMOCG00000017367	Snrpd1	94	92.857	Microtus_ochrogaster
ENSEBUG00000003170	snrpd1	94	92.857	ENSMMOG00000019089	snrpd1	94	92.857	Mola_mola
ENSEBUG00000003170	snrpd1	94	92.857	ENSMODG00000021487	SNRPD1	94	92.857	Monodelphis_domestica
ENSEBUG00000003170	snrpd1	94	92.857	ENSMALG00000014459	snrpd1	94	92.857	Monopterus_albus
ENSEBUG00000003170	snrpd1	94	92.857	MGP_CAROLIEiJ_G0021994	Snrpd1	94	92.857	Mus_caroli
ENSEBUG00000003170	snrpd1	94	92.857	ENSMUSG00000002477	Snrpd1	94	92.857	Mus_musculus
ENSEBUG00000003170	snrpd1	94	92.857	MGP_PahariEiJ_G0018731	Snrpd1	94	92.857	Mus_pahari
ENSEBUG00000003170	snrpd1	94	92.857	MGP_SPRETEiJ_G0022910	Snrpd1	94	92.857	Mus_spretus
ENSEBUG00000003170	snrpd1	92	90.909	ENSMPUG00000005567	-	94	90.909	Mustela_putorius_furo
ENSEBUG00000003170	snrpd1	94	91.964	ENSMPUG00000020041	-	94	91.964	Mustela_putorius_furo
ENSEBUG00000003170	snrpd1	91	90.217	ENSMLUG00000009124	SNRPD1	73	90.426	Myotis_lucifugus
ENSEBUG00000003170	snrpd1	94	92.857	ENSNGAG00000023946	Snrpd1	94	92.857	Nannospalax_galili
ENSEBUG00000003170	snrpd1	95	90.625	ENSNBRG00000012119	snrpd1	79	90.625	Neolamprologus_brichardi
ENSEBUG00000003170	snrpd1	94	91.071	ENSNLEG00000031430	SNRPD1	94	91.071	Nomascus_leucogenys
ENSEBUG00000003170	snrpd1	94	92.857	ENSODEG00000005764	SNRPD1	94	92.857	Octodon_degus
ENSEBUG00000003170	snrpd1	94	92.857	ENSONIG00000002486	snrpd1	94	92.857	Oreochromis_niloticus
ENSEBUG00000003170	snrpd1	89	85.556	ENSOANG00000004638	-	82	84.694	Ornithorhynchus_anatinus
ENSEBUG00000003170	snrpd1	94	91.964	ENSOCUG00000014399	-	94	91.964	Oryctolagus_cuniculus
ENSEBUG00000003170	snrpd1	92	90.909	ENSOCUG00000023761	-	94	90.909	Oryctolagus_cuniculus
ENSEBUG00000003170	snrpd1	88	92.381	ENSORLG00000012516	snrpd1	94	92.381	Oryzias_latipes
ENSEBUG00000003170	snrpd1	94	92.857	ENSORLG00020005743	snrpd1	94	92.857	Oryzias_latipes_hni
ENSEBUG00000003170	snrpd1	94	92.857	ENSORLG00015013402	snrpd1	94	92.857	Oryzias_latipes_hsok
ENSEBUG00000003170	snrpd1	94	92.857	ENSOMEG00000011571	snrpd1	94	92.857	Oryzias_melastigma
ENSEBUG00000003170	snrpd1	94	89.286	ENSOGAG00000007833	SNRPD1	92	90.909	Otolemur_garnettii
ENSEBUG00000003170	snrpd1	93	91.489	ENSOARG00000003413	-	72	91.667	Ovis_aries
ENSEBUG00000003170	snrpd1	94	92.857	ENSPPAG00000042593	SNRPD1	94	92.857	Pan_paniscus
ENSEBUG00000003170	snrpd1	94	92.857	ENSPPRG00000002399	SNRPD1	94	92.857	Panthera_pardus
ENSEBUG00000003170	snrpd1	94	66.964	ENSPPRG00000005009	-	92	66.964	Panthera_pardus
ENSEBUG00000003170	snrpd1	90	92.523	ENSPTIG00000013206	SNRPD1	94	92.523	Panthera_tigris_altaica
ENSEBUG00000003170	snrpd1	94	92.857	ENSPTRG00000009909	SNRPD1	94	92.857	Pan_troglodytes
ENSEBUG00000003170	snrpd1	93	89.362	ENSPTRG00000050159	-	87	90.196	Pan_troglodytes
ENSEBUG00000003170	snrpd1	94	92.857	ENSPANG00000023478	SNRPD1	94	92.857	Papio_anubis
ENSEBUG00000003170	snrpd1	88	91.429	ENSPKIG00000021610	snrpd1	94	91.429	Paramormyrops_kingsleyae
ENSEBUG00000003170	snrpd1	94	91.964	ENSPKIG00000003985	SNRPD1	94	91.964	Paramormyrops_kingsleyae
ENSEBUG00000003170	snrpd1	94	92.857	ENSPMGG00000001862	snrpd1	94	92.857	Periophthalmus_magnuspinnatus
ENSEBUG00000003170	snrpd1	94	92.857	ENSPEMG00000014773	-	94	92.857	Peromyscus_maniculatus_bairdii
ENSEBUG00000003170	snrpd1	94	90.722	ENSPMAG00000003938	-	85	90.385	Petromyzon_marinus
ENSEBUG00000003170	snrpd1	94	92.857	ENSPCIG00000020320	SNRPD1	94	92.857	Phascolarctos_cinereus
ENSEBUG00000003170	snrpd1	93	91.489	ENSPFOG00000012448	SNRPD1	85	91.667	Poecilia_formosa
ENSEBUG00000003170	snrpd1	93	91.489	ENSPLAG00000006738	snrpd1	85	91.667	Poecilia_latipinna
ENSEBUG00000003170	snrpd1	93	91.489	ENSPMEG00000021942	snrpd1	85	91.667	Poecilia_mexicana
ENSEBUG00000003170	snrpd1	94	92.857	ENSPREG00000007094	snrpd1	94	92.857	Poecilia_reticulata
ENSEBUG00000003170	snrpd1	94	92.857	ENSPPYG00000025874	SNRPD1	94	92.857	Pongo_abelii
ENSEBUG00000003170	snrpd1	94	92.857	ENSPCOG00000013327	SNRPD1	94	92.857	Propithecus_coquereli
ENSEBUG00000003170	snrpd1	94	92.857	ENSPVAG00000005511	SNRPD1	75	92.857	Pteropus_vampyrus
ENSEBUG00000003170	snrpd1	94	93.750	ENSPNAG00000017824	snrpd1	94	93.750	Pygocentrus_nattereri
ENSEBUG00000003170	snrpd1	94	92.857	ENSRNOG00000013714	Snrpd1	94	92.857	Rattus_norvegicus
ENSEBUG00000003170	snrpd1	94	92.857	ENSRBIG00000022996	SNRPD1	94	92.857	Rhinopithecus_bieti
ENSEBUG00000003170	snrpd1	94	92.857	ENSRROG00000027640	SNRPD1	94	92.857	Rhinopithecus_roxellana
ENSEBUG00000003170	snrpd1	94	92.857	ENSSBOG00000020998	SNRPD1	94	92.857	Saimiri_boliviensis_boliviensis
ENSEBUG00000003170	snrpd1	94	92.857	ENSSHAG00000011791	SNRPD1	94	92.857	Sarcophilus_harrisii
ENSEBUG00000003170	snrpd1	94	91.964	ENSSFOG00015022253	-	94	91.964	Scleropages_formosus
ENSEBUG00000003170	snrpd1	94	91.964	ENSSFOG00015008809	-	94	91.964	Scleropages_formosus
ENSEBUG00000003170	snrpd1	94	92.857	ENSSMAG00000008765	snrpd1	94	92.857	Scophthalmus_maximus
ENSEBUG00000003170	snrpd1	91	91.667	ENSSDUG00000010521	snrpd1	92	90.826	Seriola_dumerili
ENSEBUG00000003170	snrpd1	94	92.857	ENSSLDG00000011858	snrpd1	94	92.857	Seriola_lalandi_dorsalis
ENSEBUG00000003170	snrpd1	66	95.522	ENSSARG00000004271	SNRPD1	100	95.522	Sorex_araneus
ENSEBUG00000003170	snrpd1	94	92.857	ENSSPUG00000002824	SNRPD1	94	92.857	Sphenodon_punctatus
ENSEBUG00000003170	snrpd1	88	92.381	ENSSPAG00000015229	snrpd1	94	92.381	Stegastes_partitus
ENSEBUG00000003170	snrpd1	94	92.857	ENSSSCG00000003701	SNRPD1	94	92.857	Sus_scrofa
ENSEBUG00000003170	snrpd1	91	92.593	ENSTGUG00000005095	SNRPD1	91	92.593	Taeniopygia_guttata
ENSEBUG00000003170	snrpd1	88	92.381	ENSTRUG00000008977	snrpd1	94	92.381	Takifugu_rubripes
ENSEBUG00000003170	snrpd1	81	87.500	ENSTNIG00000001224	snrpd1	92	87.500	Tetraodon_nigroviridis
ENSEBUG00000003170	snrpd1	68	91.358	ENSTBEG00000013776	SNRPD1	92	91.358	Tupaia_belangeri
ENSEBUG00000003170	snrpd1	91	92.593	ENSTTRG00000002654	SNRPD1	94	92.593	Tursiops_truncatus
ENSEBUG00000003170	snrpd1	95	91.667	ENSUAMG00000013431	SNRPD1	96	91.667	Ursus_americanus
ENSEBUG00000003170	snrpd1	94	92.857	ENSUMAG00000019740	SNRPD1	94	92.857	Ursus_maritimus
ENSEBUG00000003170	snrpd1	94	92.857	ENSVPAG00000010056	SNRPD1	75	92.857	Vicugna_pacos
ENSEBUG00000003170	snrpd1	88	92.381	ENSVVUG00000004009	SNRPD1	94	92.381	Vulpes_vulpes
ENSEBUG00000003170	snrpd1	94	92.857	ENSXETG00000027354	snrpd1	94	92.857	Xenopus_tropicalis
ENSEBUG00000003170	snrpd1	94	92.857	ENSXCOG00000020108	snrpd1	94	92.857	Xiphophorus_couchianus
ENSEBUG00000003170	snrpd1	94	92.857	ENSXMAG00000003368	snrpd1	94	92.857	Xiphophorus_maculatus