EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003179 (Gene tree)
Gene ID: -
Gene Symbol: mrpl54
Alias: si:dkeyp-70f9.5
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 4375 bases
Position: chrFYBX02010407.1:400907-405281
Accession: ZDB-GENE-050208-381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004533	Ribosomal_L37	PF08561.10	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004971	-	351	-	ENSEBUP00000004533	116 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003179	mrpl54	75	52.874	ENSG00000183617	MRPL54	63	52.874	Homo_sapiens
ENSEBUG00000003179	mrpl54	81	48.936	ENSAPOG00000022643	mrpl54	68	48.936	Acanthochromis_polyacanthus
ENSEBUG00000003179	mrpl54	75	55.172	ENSAMEG00000005908	MRPL54	63	55.172	Ailuropoda_melanoleuca
ENSEBUG00000003179	mrpl54	75	48.276	ENSACIG00000006438	mrpl54	68	48.936	Amphilophus_citrinellus
ENSEBUG00000003179	mrpl54	72	47.619	ENSAOCG00000006430	mrpl54	68	47.872	Amphiprion_ocellaris
ENSEBUG00000003179	mrpl54	72	47.619	ENSAPEG00000023406	mrpl54	68	47.872	Amphiprion_percula
ENSEBUG00000003179	mrpl54	74	46.512	ENSATEG00000004969	mrpl54	80	42.342	Anabas_testudineus
ENSEBUG00000003179	mrpl54	82	56.842	ENSACAG00000017747	-	89	56.842	Anolis_carolinensis
ENSEBUG00000003179	mrpl54	75	52.874	ENSANAG00000028692	MRPL54	63	52.874	Aotus_nancymaae
ENSEBUG00000003179	mrpl54	75	47.126	ENSACLG00000001877	mrpl54	68	47.872	Astatotilapia_calliptera
ENSEBUG00000003179	mrpl54	67	47.436	ENSAMXG00000018143	mrpl54	67	45.745	Astyanax_mexicanus
ENSEBUG00000003179	mrpl54	74	58.140	ENSBTAG00000008396	MRPL54	62	58.140	Bos_taurus
ENSEBUG00000003179	mrpl54	68	39.759	WBGene00009128	mrpl-54	62	39.759	Caenorhabditis_elegans
ENSEBUG00000003179	mrpl54	75	54.023	ENSCJAG00000014998	MRPL54	63	54.023	Callithrix_jacchus
ENSEBUG00000003179	mrpl54	75	52.874	ENSCAFG00000019192	MRPL54	63	52.874	Canis_familiaris
ENSEBUG00000003179	mrpl54	75	52.874	ENSCAFG00020018333	MRPL54	63	52.874	Canis_lupus_dingo
ENSEBUG00000003179	mrpl54	74	58.140	ENSCHIG00000026538	MRPL54	62	58.140	Capra_hircus
ENSEBUG00000003179	mrpl54	72	58.333	ENSCAPG00000012166	MRPL54	88	58.333	Cavia_aperea
ENSEBUG00000003179	mrpl54	72	58.333	ENSCPOG00000031082	MRPL54	61	58.333	Cavia_porcellus
ENSEBUG00000003179	mrpl54	75	50.575	ENSCCAG00000000138	MRPL54	63	50.575	Cebus_capucinus
ENSEBUG00000003179	mrpl54	72	58.333	ENSCATG00000014066	MRPL54	61	58.333	Cercocebus_atys
ENSEBUG00000003179	mrpl54	75	57.471	ENSCLAG00000007908	MRPL54	64	57.471	Chinchilla_lanigera
ENSEBUG00000003179	mrpl54	72	58.333	ENSCSAG00000010950	MRPL54	61	58.333	Chlorocebus_sabaeus
ENSEBUG00000003179	mrpl54	80	62.366	ENSCPBG00000017103	MRPL54	53	62.366	Chrysemys_picta_bellii
ENSEBUG00000003179	mrpl54	62	43.056	ENSCING00000019896	-	51	43.056	Ciona_intestinalis
ENSEBUG00000003179	mrpl54	62	44.444	ENSCSAVG00000009604	-	50	44.444	Ciona_savignyi
ENSEBUG00000003179	mrpl54	75	55.172	ENSCANG00000027841	MRPL54	63	55.172	Colobus_angolensis_palliatus
ENSEBUG00000003179	mrpl54	75	56.322	ENSCGRG00001019482	Mrpl54	63	56.322	Cricetulus_griseus_chok1gshd
ENSEBUG00000003179	mrpl54	75	56.322	ENSCGRG00000010923	Mrpl54	63	56.322	Cricetulus_griseus_crigri
ENSEBUG00000003179	mrpl54	72	46.429	ENSCSEG00000019883	mrpl54	62	48.387	Cynoglossus_semilaevis
ENSEBUG00000003179	mrpl54	95	47.273	ENSCVAG00000002210	mrpl54	78	47.273	Cyprinodon_variegatus
ENSEBUG00000003179	mrpl54	80	47.312	ENSDARG00000071468	mrpl54	69	47.312	Danio_rerio
ENSEBUG00000003179	mrpl54	72	50.602	ENSDNOG00000007387	MRPL54	63	48.837	Dasypus_novemcinctus
ENSEBUG00000003179	mrpl54	75	52.874	ENSDORG00000005326	Mrpl54	65	52.874	Dipodomys_ordii
ENSEBUG00000003179	mrpl54	72	39.759	FBgn0034579	mRpL54	68	40.000	Drosophila_melanogaster
ENSEBUG00000003179	mrpl54	75	52.874	ENSETEG00000017500	MRPL54	65	52.874	Echinops_telfairi
ENSEBUG00000003179	mrpl54	74	54.651	ENSEASG00005022283	MRPL54	66	54.444	Equus_asinus_asinus
ENSEBUG00000003179	mrpl54	74	55.814	ENSECAG00000001515	MRPL54	66	55.556	Equus_caballus
ENSEBUG00000003179	mrpl54	67	50.000	ENSELUG00000022358	mrpl54	68	47.872	Esox_lucius
ENSEBUG00000003179	mrpl54	75	55.172	ENSFCAG00000007144	MRPL54	63	55.172	Felis_catus
ENSEBUG00000003179	mrpl54	81	57.447	ENSFALG00000011660	MRPL54	87	57.447	Ficedula_albicollis
ENSEBUG00000003179	mrpl54	97	48.387	ENSFDAG00000020803	MRPL54	90	48.387	Fukomys_damarensis
ENSEBUG00000003179	mrpl54	73	52.941	ENSGALG00000027611	MRPL54	77	52.688	Gallus_gallus
ENSEBUG00000003179	mrpl54	75	50.575	ENSGAFG00000016193	mrpl54	68	52.128	Gambusia_affinis
ENSEBUG00000003179	mrpl54	91	60.000	ENSGAGG00000020238	MRPL54	83	60.000	Gopherus_agassizii
ENSEBUG00000003179	mrpl54	75	55.172	ENSGGOG00000014722	MRPL54	63	55.172	Gorilla_gorilla
ENSEBUG00000003179	mrpl54	75	47.126	ENSHBUG00000009028	mrpl54	56	47.872	Haplochromis_burtoni
ENSEBUG00000003179	mrpl54	86	52.941	ENSHGLG00000006157	MRPL54	76	52.941	Heterocephalus_glaber_female
ENSEBUG00000003179	mrpl54	86	52.941	ENSHGLG00100000788	MRPL54	76	52.941	Heterocephalus_glaber_male
ENSEBUG00000003179	mrpl54	75	50.575	ENSHCOG00000000536	mrpl54	66	50.000	Hippocampus_comes
ENSEBUG00000003179	mrpl54	75	52.874	ENSIPUG00000024854	mrpl54	68	53.191	Ictalurus_punctatus
ENSEBUG00000003179	mrpl54	75	55.172	ENSSTOG00000022378	MRPL54	89	55.172	Ictidomys_tridecemlineatus
ENSEBUG00000003179	mrpl54	74	60.465	ENSJJAG00000020405	Mrpl54	62	60.465	Jaculus_jaculus
ENSEBUG00000003179	mrpl54	80	49.462	ENSKMAG00000022310	mrpl54	67	49.462	Kryptolebias_marmoratus
ENSEBUG00000003179	mrpl54	81	47.872	ENSLBEG00000005935	mrpl54	69	47.872	Labrus_bergylta
ENSEBUG00000003179	mrpl54	80	55.914	ENSLACG00000013912	MRPL54	69	55.914	Latimeria_chalumnae
ENSEBUG00000003179	mrpl54	75	54.023	ENSLOCG00000003860	mrpl54	68	54.255	Lepisosteus_oculatus
ENSEBUG00000003179	mrpl54	75	56.322	ENSLAFG00000029657	MRPL54	65	54.945	Loxodonta_africana
ENSEBUG00000003179	mrpl54	72	58.333	ENSMFAG00000003311	MRPL54	61	58.333	Macaca_fascicularis
ENSEBUG00000003179	mrpl54	72	58.333	ENSMMUG00000044080	MRPL54	61	58.333	Macaca_mulatta
ENSEBUG00000003179	mrpl54	72	58.333	ENSMNEG00000039499	MRPL54	61	58.333	Macaca_nemestrina
ENSEBUG00000003179	mrpl54	81	47.872	ENSMAMG00000003291	mrpl54	72	47.872	Mastacembelus_armatus
ENSEBUG00000003179	mrpl54	75	47.126	ENSMZEG00005009023	mrpl54	56	47.872	Maylandia_zebra
ENSEBUG00000003179	mrpl54	80	52.688	ENSMGAG00000000951	MRPL54	96	52.688	Meleagris_gallopavo
ENSEBUG00000003179	mrpl54	82	53.684	ENSMAUG00000009543	Mrpl54	70	53.684	Mesocricetus_auratus
ENSEBUG00000003179	mrpl54	72	55.952	ENSMICG00000034581	MRPL54	53	55.952	Microcebus_murinus
ENSEBUG00000003179	mrpl54	75	56.322	ENSMOCG00000017895	Mrpl54	63	56.322	Microtus_ochrogaster
ENSEBUG00000003179	mrpl54	89	47.573	ENSMMOG00000020370	mrpl54	82	47.573	Mola_mola
ENSEBUG00000003179	mrpl54	78	59.341	ENSMODG00000000602	MRPL54	67	59.341	Monodelphis_domestica
ENSEBUG00000003179	mrpl54	74	47.674	ENSMALG00000020280	mrpl54	67	48.387	Monopterus_albus
ENSEBUG00000003179	mrpl54	75	54.023	MGP_CAROLIEiJ_G0015629	Mrpl54	64	54.023	Mus_caroli
ENSEBUG00000003179	mrpl54	72	55.952	ENSMUSG00000034932	Mrpl54	64	54.023	Mus_musculus
ENSEBUG00000003179	mrpl54	75	55.172	MGP_PahariEiJ_G0031042	Mrpl54	64	55.172	Mus_pahari
ENSEBUG00000003179	mrpl54	75	54.023	MGP_SPRETEiJ_G0016447	Mrpl54	64	54.023	Mus_spretus
ENSEBUG00000003179	mrpl54	71	56.098	ENSMLUG00000010801	MRPL54	82	54.023	Myotis_lucifugus
ENSEBUG00000003179	mrpl54	75	52.874	ENSNGAG00000021044	Mrpl54	63	52.874	Nannospalax_galili
ENSEBUG00000003179	mrpl54	75	47.126	ENSNBRG00000000568	mrpl54	68	47.872	Neolamprologus_brichardi
ENSEBUG00000003179	mrpl54	73	61.176	ENSMEUG00000013033	MRPL54	64	61.176	Notamacropus_eugenii
ENSEBUG00000003179	mrpl54	74	58.140	ENSOPRG00000010035	-	64	58.140	Ochotona_princeps
ENSEBUG00000003179	mrpl54	75	55.172	ENSODEG00000013969	MRPL54	63	55.172	Octodon_degus
ENSEBUG00000003179	mrpl54	75	47.126	ENSONIG00000002312	mrpl54	61	47.872	Oreochromis_niloticus
ENSEBUG00000003179	mrpl54	80	45.161	ENSORLG00000016960	mrpl54	75	45.161	Oryzias_latipes
ENSEBUG00000003179	mrpl54	80	45.161	ENSORLG00020014934	mrpl54	89	45.161	Oryzias_latipes_hni
ENSEBUG00000003179	mrpl54	80	45.161	ENSORLG00015010788	mrpl54	73	45.161	Oryzias_latipes_hsok
ENSEBUG00000003179	mrpl54	75	49.425	ENSOMEG00000009005	mrpl54	68	50.000	Oryzias_melastigma
ENSEBUG00000003179	mrpl54	75	55.172	ENSOGAG00000033519	-	63	55.172	Otolemur_garnettii
ENSEBUG00000003179	mrpl54	75	55.172	ENSOGAG00000026254	-	64	55.172	Otolemur_garnettii
ENSEBUG00000003179	mrpl54	75	54.023	ENSPPAG00000042418	MRPL54	63	54.023	Pan_paniscus
ENSEBUG00000003179	mrpl54	75	56.322	ENSPPRG00000012325	MRPL54	65	56.322	Panthera_pardus
ENSEBUG00000003179	mrpl54	75	56.322	ENSPTIG00000017727	MRPL54	62	56.322	Panthera_tigris_altaica
ENSEBUG00000003179	mrpl54	75	54.023	ENSPTRG00000010276	MRPL54	63	54.023	Pan_troglodytes
ENSEBUG00000003179	mrpl54	72	58.333	ENSPANG00000033944	MRPL54	61	58.333	Papio_anubis
ENSEBUG00000003179	mrpl54	81	51.064	ENSPKIG00000009984	mrpl54	55	51.064	Paramormyrops_kingsleyae
ENSEBUG00000003179	mrpl54	80	61.290	ENSPSIG00000013587	MRPL54	98	61.290	Pelodiscus_sinensis
ENSEBUG00000003179	mrpl54	75	50.575	ENSPMGG00000015972	mrpl54	62	51.064	Periophthalmus_magnuspinnatus
ENSEBUG00000003179	mrpl54	75	56.322	ENSPEMG00000022929	Mrpl54	63	56.322	Peromyscus_maniculatus_bairdii
ENSEBUG00000003179	mrpl54	78	56.667	ENSPCIG00000025383	MRPL54	66	56.667	Phascolarctos_cinereus
ENSEBUG00000003179	mrpl54	80	51.613	ENSPFOG00000007409	mrpl54	67	51.613	Poecilia_formosa
ENSEBUG00000003179	mrpl54	80	51.613	ENSPLAG00000001640	mrpl54	67	51.613	Poecilia_latipinna
ENSEBUG00000003179	mrpl54	80	51.613	ENSPLAG00000001633	mrpl54	67	51.613	Poecilia_latipinna
ENSEBUG00000003179	mrpl54	80	51.613	ENSPMEG00000021078	mrpl54	67	51.613	Poecilia_mexicana
ENSEBUG00000003179	mrpl54	80	51.613	ENSPMEG00000021068	mrpl54	67	51.613	Poecilia_mexicana
ENSEBUG00000003179	mrpl54	81	52.128	ENSPREG00000012425	mrpl54	68	52.128	Poecilia_reticulata
ENSEBUG00000003179	mrpl54	93	50.000	ENSPPYG00000009386	MRPL54	83	50.000	Pongo_abelii
ENSEBUG00000003179	mrpl54	72	55.952	ENSPCAG00000000690	MRPL54	61	55.952	Procavia_capensis
ENSEBUG00000003179	mrpl54	75	57.471	ENSPCOG00000027550	MRPL54	63	57.471	Propithecus_coquereli
ENSEBUG00000003179	mrpl54	75	45.977	ENSPNYG00000022006	mrpl54	56	46.809	Pundamilia_nyererei
ENSEBUG00000003179	mrpl54	71	56.098	ENSPNAG00000000077	mrpl54	67	55.914	Pygocentrus_nattereri
ENSEBUG00000003179	mrpl54	75	56.322	ENSRNOG00000020464	Mrpl54	64	56.322	Rattus_norvegicus
ENSEBUG00000003179	mrpl54	75	55.172	ENSRBIG00000027038	MRPL54	64	55.172	Rhinopithecus_bieti
ENSEBUG00000003179	mrpl54	75	55.172	ENSRROG00000018776	MRPL54	64	55.172	Rhinopithecus_roxellana
ENSEBUG00000003179	mrpl54	81	48.936	ENSSBOG00000028081	MRPL54	68	48.936	Saimiri_boliviensis_boliviensis
ENSEBUG00000003179	mrpl54	75	59.770	ENSSHAG00000002557	MRPL54	67	60.440	Sarcophilus_harrisii
ENSEBUG00000003179	mrpl54	75	49.425	ENSSFOG00015008073	mrpl54	68	48.936	Scleropages_formosus
ENSEBUG00000003179	mrpl54	75	51.724	ENSSMAG00000009226	mrpl54	68	51.064	Scophthalmus_maximus
ENSEBUG00000003179	mrpl54	77	47.191	ENSSDUG00000009545	mrpl54	65	47.191	Seriola_dumerili
ENSEBUG00000003179	mrpl54	77	48.315	ENSSLDG00000001781	mrpl54	65	48.315	Seriola_lalandi_dorsalis
ENSEBUG00000003179	mrpl54	80	60.215	ENSSPUG00000015361	MRPL54	70	60.215	Sphenodon_punctatus
ENSEBUG00000003179	mrpl54	80	52.688	ENSSPAG00000003775	-	67	52.688	Stegastes_partitus
ENSEBUG00000003179	mrpl54	80	52.688	ENSSPAG00000015601	mrpl54	67	52.688	Stegastes_partitus
ENSEBUG00000003179	mrpl54	75	56.322	ENSSSCG00000024242	MRPL54	63	56.322	Sus_scrofa
ENSEBUG00000003179	mrpl54	76	50.000	ENSTRUG00000004609	mrpl54	68	51.064	Takifugu_rubripes
ENSEBUG00000003179	mrpl54	75	49.425	ENSTNIG00000015468	mrpl54	68	50.000	Tetraodon_nigroviridis
ENSEBUG00000003179	mrpl54	75	55.172	ENSTTRG00000004410	MRPL54	64	55.172	Tursiops_truncatus
ENSEBUG00000003179	mrpl54	75	55.172	ENSUAMG00000021572	MRPL54	63	55.172	Ursus_americanus
ENSEBUG00000003179	mrpl54	75	55.172	ENSUMAG00000007416	MRPL54	63	55.172	Ursus_maritimus
ENSEBUG00000003179	mrpl54	75	52.874	ENSVVUG00000004420	MRPL54	63	52.874	Vulpes_vulpes
ENSEBUG00000003179	mrpl54	80	52.688	ENSXETG00000033250	MRPL54	70	52.688	Xenopus_tropicalis
ENSEBUG00000003179	mrpl54	75	51.724	ENSXMAG00000003500	mrpl54	68	53.191	Xiphophorus_maculatus