EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000003190 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 92374 bases
Position: chrFYBX02010221.1:922689-1015062
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004543	Beta-Casp	PF10996.8	1.3e-25	1	1
ENSEBUP00000004567	Beta-Casp	PF10996.8	2.2e-25	1	1
ENSEBUP00000004586	Beta-Casp	PF10996.8	4.5e-25	1	1
ENSEBUP00000004586	Lactamase_B	PF00753.27	1e-11	1	1
ENSEBUP00000004543	Lactamase_B	PF00753.27	1.5e-11	1	1
ENSEBUP00000004567	Lactamase_B	PF00753.27	1.7e-11	1	1
ENSEBUP00000004586	RMMBL	PF07521.12	1.4e-18	1	1
ENSEBUP00000004543	RMMBL	PF07521.12	1.5e-18	1	1
ENSEBUP00000004567	RMMBL	PF07521.12	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000004981	-	3815	-	ENSEBUP00000004543	595 (aa)	-	-
ENSEBUT00000005024	-	1925	-	ENSEBUP00000004586	507 (aa)	-	-
ENSEBUT00000005005	-	3790	-	ENSEBUP00000004567	627 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003190's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000003190	-	88	41.722	ENSEBUG00000009018	cpsf3	63	41.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003190	-	100	81.208	ENSG00000127054	INTS11	100	93.578	Homo_sapiens
ENSEBUG00000003190	-	100	83.082	ENSAPOG00000022656	ints11	99	83.082	Acanthochromis_polyacanthus
ENSEBUG00000003190	-	100	81.544	ENSAMEG00000013755	INTS11	99	81.544	Ailuropoda_melanoleuca
ENSEBUG00000003190	-	100	82.580	ENSACIG00000016715	ints11	99	82.580	Amphilophus_citrinellus
ENSEBUG00000003190	-	100	82.412	ENSAOCG00000021172	ints11	99	82.412	Amphiprion_ocellaris
ENSEBUG00000003190	-	100	82.412	ENSAPEG00000024732	ints11	99	82.412	Amphiprion_percula
ENSEBUG00000003190	-	100	82.245	ENSATEG00000024376	ints11	99	82.245	Anabas_testudineus
ENSEBUG00000003190	-	100	83.139	ENSAPLG00000005238	INTS11	99	83.139	Anas_platyrhynchos
ENSEBUG00000003190	-	92	90.733	ENSACAG00000013975	INTS11	99	82.718	Anolis_carolinensis
ENSEBUG00000003190	-	100	80.872	ENSANAG00000034133	INTS11	99	88.820	Aotus_nancymaae
ENSEBUG00000003190	-	92	89.655	ENSACLG00000018782	ints11	99	82.042	Astatotilapia_calliptera
ENSEBUG00000003190	-	100	82.747	ENSAMXG00000038758	ints11	99	82.747	Astyanax_mexicanus
ENSEBUG00000003190	-	100	80.705	ENSBTAG00000007620	INTS11	99	80.705	Bos_taurus
ENSEBUG00000003190	-	89	70.199	WBGene00008642	F10B5.8	93	61.336	Caenorhabditis_elegans
ENSEBUG00000003190	-	100	80.872	ENSCJAG00000011144	INTS11	99	88.820	Callithrix_jacchus
ENSEBUG00000003190	-	100	81.879	ENSCAFG00000019287	INTS11	99	81.879	Canis_familiaris
ENSEBUG00000003190	-	100	81.879	ENSCAFG00020011566	INTS11	99	81.879	Canis_lupus_dingo
ENSEBUG00000003190	-	100	80.705	ENSCHIG00000023117	INTS11	99	80.705	Capra_hircus
ENSEBUG00000003190	-	90	88.571	ENSTSYG00000012018	INTS11	99	81.119	Carlito_syrichta
ENSEBUG00000003190	-	85	79.528	ENSCAPG00000012788	INTS11	93	79.528	Cavia_aperea
ENSEBUG00000003190	-	92	89.009	ENSCPOG00000005152	INTS11	99	80.872	Cavia_porcellus
ENSEBUG00000003190	-	100	80.872	ENSCCAG00000026348	INTS11	99	90.000	Cebus_capucinus
ENSEBUG00000003190	-	100	81.208	ENSCATG00000005882	INTS11	99	90.000	Cercocebus_atys
ENSEBUG00000003190	-	92	89.009	ENSCLAG00000004586	INTS11	99	80.872	Chinchilla_lanigera
ENSEBUG00000003190	-	100	81.040	ENSCSAG00000000681	INTS11	99	81.040	Chlorocebus_sabaeus
ENSEBUG00000003190	-	88	94.672	ENSCPBG00000022634	INTS11	99	94.672	Chrysemys_picta_bellii
ENSEBUG00000003190	-	93	78.814	ENSCING00000002398	-	99	69.884	Ciona_intestinalis
ENSEBUG00000003190	-	91	79.914	ENSCSAVG00000007312	-	99	70.903	Ciona_savignyi
ENSEBUG00000003190	-	100	81.208	ENSCANG00000034418	INTS11	99	88.095	Colobus_angolensis_palliatus
ENSEBUG00000003190	-	92	89.009	ENSCGRG00001013448	Ints11	99	80.705	Cricetulus_griseus_chok1gshd
ENSEBUG00000003190	-	92	89.009	ENSCGRG00000006961	Ints11	99	80.705	Cricetulus_griseus_crigri
ENSEBUG00000003190	-	100	82.580	ENSCSEG00000017374	ints11	99	82.580	Cynoglossus_semilaevis
ENSEBUG00000003190	-	100	78.894	ENSCVAG00000008788	ints11	99	78.894	Cyprinodon_variegatus
ENSEBUG00000003190	-	100	82.747	ENSDARG00000025212	ints11	100	93.694	Danio_rerio
ENSEBUG00000003190	-	100	79.328	ENSDNOG00000025863	INTS11	84	92.111	Dasypus_novemcinctus
ENSEBUG00000003190	-	98	80.887	ENSDORG00000002045	Ints11	99	80.887	Dipodomys_ordii
ENSEBUG00000003190	-	92	79.785	FBgn0039691	IntS11	99	68.395	Drosophila_melanogaster
ENSEBUG00000003190	-	90	80.837	ENSETEG00000002094	INTS11	100	78.758	Echinops_telfairi
ENSEBUG00000003190	-	100	81.544	ENSEASG00005014989	INTS11	77	79.823	Equus_asinus_asinus
ENSEBUG00000003190	-	100	81.544	ENSECAG00000023292	INTS11	70	81.544	Equus_caballus
ENSEBUG00000003190	-	100	82.383	ENSEEUG00000000838	INTS11	99	82.383	Erinaceus_europaeus
ENSEBUG00000003190	-	100	82.580	ENSELUG00000004815	ints11	99	82.580	Esox_lucius
ENSEBUG00000003190	-	100	81.711	ENSFCAG00000007618	INTS11	99	90.476	Felis_catus
ENSEBUG00000003190	-	100	81.376	ENSFALG00000009231	INTS11	99	81.376	Ficedula_albicollis
ENSEBUG00000003190	-	92	89.224	ENSFDAG00000009131	INTS11	99	81.040	Fukomys_damarensis
ENSEBUG00000003190	-	100	82.747	ENSFHEG00000007863	ints11	99	82.747	Fundulus_heteroclitus
ENSEBUG00000003190	-	100	83.278	ENSGMOG00000006721	ints11	99	83.278	Gadus_morhua
ENSEBUG00000003190	-	100	83.557	ENSGALG00000001691	INTS11	99	83.557	Gallus_gallus
ENSEBUG00000003190	-	100	74.757	ENSGAFG00000019948	ints11	99	74.757	Gambusia_affinis
ENSEBUG00000003190	-	100	83.082	ENSGACG00000011260	ints11	99	83.082	Gasterosteus_aculeatus
ENSEBUG00000003190	-	100	84.060	ENSGAGG00000015874	INTS11	99	84.060	Gopherus_agassizii
ENSEBUG00000003190	-	100	81.040	ENSGGOG00000005366	INTS11	99	90.000	Gorilla_gorilla
ENSEBUG00000003190	-	100	82.915	ENSHBUG00000006820	ints11	99	82.915	Haplochromis_burtoni
ENSEBUG00000003190	-	99	80.339	ENSHGLG00000017561	INTS11	98	80.339	Heterocephalus_glaber_female
ENSEBUG00000003190	-	99	80.339	ENSHGLG00100014276	INTS11	98	80.339	Heterocephalus_glaber_male
ENSEBUG00000003190	-	100	82.580	ENSHCOG00000013135	ints11	99	82.580	Hippocampus_comes
ENSEBUG00000003190	-	100	81.407	ENSIPUG00000022761	cpsf3l	99	81.407	Ictalurus_punctatus
ENSEBUG00000003190	-	99	80.952	ENSSTOG00000020019	INTS11	98	80.952	Ictidomys_tridecemlineatus
ENSEBUG00000003190	-	100	77.013	ENSJJAG00000008717	Ints11	99	77.013	Jaculus_jaculus
ENSEBUG00000003190	-	100	82.747	ENSKMAG00000003315	ints11	99	82.747	Kryptolebias_marmoratus
ENSEBUG00000003190	-	92	90.302	ENSLBEG00000011392	ints11	99	81.463	Labrus_bergylta
ENSEBUG00000003190	-	100	69.218	ENSLACG00000018802	INTS11	99	69.218	Latimeria_chalumnae
ENSEBUG00000003190	-	100	79.264	ENSLOCG00000002177	ints11	99	79.264	Lepisosteus_oculatus
ENSEBUG00000003190	-	99	80.672	ENSLAFG00000013687	INTS11	99	80.672	Loxodonta_africana
ENSEBUG00000003190	-	100	81.208	ENSMFAG00000044583	INTS11	99	90.000	Macaca_fascicularis
ENSEBUG00000003190	-	99	80.135	ENSMMUG00000013866	INTS11	98	90.000	Macaca_mulatta
ENSEBUG00000003190	-	100	81.208	ENSMNEG00000030021	INTS11	99	90.000	Macaca_nemestrina
ENSEBUG00000003190	-	89	90.278	ENSMLEG00000044372	INTS11	99	90.278	Mandrillus_leucophaeus
ENSEBUG00000003190	-	100	82.412	ENSMAMG00000004522	ints11	99	82.412	Mastacembelus_armatus
ENSEBUG00000003190	-	100	82.747	ENSMZEG00005023352	ints11	99	82.747	Maylandia_zebra
ENSEBUG00000003190	-	100	83.725	ENSMGAG00000002879	INTS11	99	83.725	Meleagris_gallopavo
ENSEBUG00000003190	-	92	89.009	ENSMAUG00000010199	Ints11	99	80.705	Mesocricetus_auratus
ENSEBUG00000003190	-	100	81.208	ENSMICG00000014186	INTS11	99	91.304	Microcebus_murinus
ENSEBUG00000003190	-	92	89.009	ENSMOCG00000021304	Ints11	99	80.872	Microtus_ochrogaster
ENSEBUG00000003190	-	100	74.539	ENSMMOG00000015040	ints11	99	74.539	Mola_mola
ENSEBUG00000003190	-	100	83.054	ENSMODG00000006290	INTS11	99	83.054	Monodelphis_domestica
ENSEBUG00000003190	-	100	82.915	ENSMALG00000002210	ints11	99	82.915	Monopterus_albus
ENSEBUG00000003190	-	92	89.009	MGP_CAROLIEiJ_G0026910	Ints11	99	80.872	Mus_caroli
ENSEBUG00000003190	-	92	89.009	ENSMUSG00000029034	Ints11	99	80.872	Mus_musculus
ENSEBUG00000003190	-	92	89.009	MGP_PahariEiJ_G0029259	Ints11	99	80.872	Mus_pahari
ENSEBUG00000003190	-	92	89.009	MGP_SPRETEiJ_G0027905	Ints11	99	80.872	Mus_spretus
ENSEBUG00000003190	-	95	81.305	ENSMPUG00000014311	INTS11	99	81.305	Mustela_putorius_furo
ENSEBUG00000003190	-	92	89.009	ENSNGAG00000010139	Ints11	99	80.872	Nannospalax_galili
ENSEBUG00000003190	-	100	76.884	ENSNBRG00000002564	ints11	99	76.884	Neolamprologus_brichardi
ENSEBUG00000003190	-	92	87.069	ENSNLEG00000000053	INTS11	91	88.095	Nomascus_leucogenys
ENSEBUG00000003190	-	98	79.690	ENSMEUG00000011664	INTS11	99	79.690	Notamacropus_eugenii
ENSEBUG00000003190	-	54	94.161	ENSOPRG00000001794	-	83	94.161	Ochotona_princeps
ENSEBUG00000003190	-	92	88.578	ENSODEG00000009761	INTS11	99	80.201	Octodon_degus
ENSEBUG00000003190	-	100	82.747	ENSONIG00000016600	ints11	99	82.747	Oreochromis_niloticus
ENSEBUG00000003190	-	92	60.085	ENSOANG00000013023	-	99	59.394	Ornithorhynchus_anatinus
ENSEBUG00000003190	-	100	81.910	ENSORLG00000015957	ints11	99	81.910	Oryzias_latipes
ENSEBUG00000003190	-	100	81.910	ENSORLG00020008544	ints11	99	81.910	Oryzias_latipes_hni
ENSEBUG00000003190	-	100	81.910	ENSORLG00015003381	ints11	99	81.910	Oryzias_latipes_hsok
ENSEBUG00000003190	-	92	89.871	ENSOMEG00000018159	ints11	100	81.818	Oryzias_melastigma
ENSEBUG00000003190	-	100	80.905	ENSOGAG00000000463	INTS11	99	80.905	Otolemur_garnettii
ENSEBUG00000003190	-	91	86.247	ENSOARG00000004725	INTS11	97	86.247	Ovis_aries
ENSEBUG00000003190	-	100	81.208	ENSPPAG00000037865	INTS11	99	90.000	Pan_paniscus
ENSEBUG00000003190	-	100	81.711	ENSPPRG00000021402	INTS11	99	90.476	Panthera_pardus
ENSEBUG00000003190	-	98	81.601	ENSPTIG00000019834	INTS11	95	90.323	Panthera_tigris_altaica
ENSEBUG00000003190	-	100	81.208	ENSPTRG00000051102	INTS11	99	90.000	Pan_troglodytes
ENSEBUG00000003190	-	100	81.208	ENSPANG00000019349	INTS11	99	90.000	Papio_anubis
ENSEBUG00000003190	-	100	83.752	ENSPKIG00000008091	ints11	99	83.752	Paramormyrops_kingsleyae
ENSEBUG00000003190	-	100	83.557	ENSPSIG00000002824	INTS11	99	83.557	Pelodiscus_sinensis
ENSEBUG00000003190	-	92	90.086	ENSPMGG00000006430	ints11	99	81.481	Periophthalmus_magnuspinnatus
ENSEBUG00000003190	-	92	89.009	ENSPEMG00000018526	Ints11	99	80.705	Peromyscus_maniculatus_bairdii
ENSEBUG00000003190	-	68	76.692	ENSPCIG00000023187	-	99	76.692	Phascolarctos_cinereus
ENSEBUG00000003190	-	100	83.557	ENSPCIG00000007815	-	99	83.557	Phascolarctos_cinereus
ENSEBUG00000003190	-	100	82.943	ENSPFOG00000008512	ints11	99	82.943	Poecilia_formosa
ENSEBUG00000003190	-	100	83.082	ENSPLAG00000019195	ints11	99	83.082	Poecilia_latipinna
ENSEBUG00000003190	-	100	82.915	ENSPMEG00000018956	ints11	99	82.915	Poecilia_mexicana
ENSEBUG00000003190	-	100	83.250	ENSPREG00000021516	ints11	99	83.250	Poecilia_reticulata
ENSEBUG00000003190	-	99	76.007	ENSPPYG00000002013	INTS11	99	76.109	Pongo_abelii
ENSEBUG00000003190	-	70	91.667	ENSPCAG00000002309	INTS11	68	91.667	Procavia_capensis
ENSEBUG00000003190	-	100	81.376	ENSPCOG00000016861	INTS11	99	85.714	Propithecus_coquereli
ENSEBUG00000003190	-	100	81.544	ENSPVAG00000001017	INTS11	99	81.544	Pteropus_vampyrus
ENSEBUG00000003190	-	100	82.915	ENSPNYG00000021238	ints11	99	82.915	Pundamilia_nyererei
ENSEBUG00000003190	-	50	31.679	ENSPNAG00000016476	-	84	31.679	Pygocentrus_nattereri
ENSEBUG00000003190	-	100	81.910	ENSPNAG00000022204	ints11	99	81.910	Pygocentrus_nattereri
ENSEBUG00000003190	-	100	81.040	ENSRNOG00000019712	Ints11	99	81.040	Rattus_norvegicus
ENSEBUG00000003190	-	100	80.705	ENSRBIG00000039487	INTS11	99	90.000	Rhinopithecus_bieti
ENSEBUG00000003190	-	57	70.710	ENSRROG00000039631	INTS11	99	70.710	Rhinopithecus_roxellana
ENSEBUG00000003190	-	100	80.872	ENSSBOG00000018848	INTS11	99	88.820	Saimiri_boliviensis_boliviensis
ENSEBUG00000003190	-	100	83.612	ENSSFOG00015020610	cpsf3l	99	83.612	Scleropages_formosus
ENSEBUG00000003190	-	100	83.417	ENSSMAG00000019579	ints11	99	83.417	Scophthalmus_maximus
ENSEBUG00000003190	-	100	82.747	ENSSDUG00000003980	ints11	99	82.747	Seriola_dumerili
ENSEBUG00000003190	-	100	82.747	ENSSLDG00000017198	ints11	99	82.747	Seriola_lalandi_dorsalis
ENSEBUG00000003190	-	100	83.725	ENSSPUG00000016767	INTS11	100	90.476	Sphenodon_punctatus
ENSEBUG00000003190	-	100	82.747	ENSSPAG00000018290	ints11	99	82.747	Stegastes_partitus
ENSEBUG00000003190	-	100	80.872	ENSSSCG00000003339	INTS11	99	80.872	Sus_scrofa
ENSEBUG00000003190	-	98	82.594	ENSTGUG00000003192	-	99	82.594	Taeniopygia_guttata
ENSEBUG00000003190	-	100	82.412	ENSTRUG00000005523	ints11	99	82.412	Takifugu_rubripes
ENSEBUG00000003190	-	100	81.910	ENSTNIG00000012415	ints11	99	81.910	Tetraodon_nigroviridis
ENSEBUG00000003190	-	89	80.529	ENSTBEG00000005377	INTS11	99	80.529	Tupaia_belangeri
ENSEBUG00000003190	-	100	68.289	ENSTTRG00000017031	INTS11	99	68.289	Tursiops_truncatus
ENSEBUG00000003190	-	100	81.711	ENSUAMG00000012804	INTS11	99	81.711	Ursus_americanus
ENSEBUG00000003190	-	98	81.601	ENSUMAG00000002070	INTS11	97	81.601	Ursus_maritimus
ENSEBUG00000003190	-	59	79.487	ENSVPAG00000005134	-	76	79.487	Vicugna_pacos
ENSEBUG00000003190	-	100	81.879	ENSVVUG00000004350	INTS11	99	81.879	Vulpes_vulpes
ENSEBUG00000003190	-	92	92.688	ENSXETG00000030716	INTS11	99	84.564	Xenopus_tropicalis
ENSEBUG00000003190	-	100	77.554	ENSXCOG00000015382	ints11	99	77.554	Xiphophorus_couchianus
ENSEBUG00000003190	-	100	82.915	ENSXMAG00000012456	ints11	99	82.915	Xiphophorus_maculatus