EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000003216 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
SCR3
Full Name
-
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Plus strand
Length
486081 bases
Position
chrFYBX02009581.1:1979119-2465199
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000004588RRM_1PF00076.221.4e-3412
ENSEBUP00000004588RRM_1PF00076.221.4e-3422
ENSEBUP00000004576RRM_1PF00076.221.6e-3412
ENSEBUP00000004576RRM_1PF00076.221.6e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000005026-3752-ENSEBUP00000004588382 (aa)--
ENSEBUT00000005014-3832-ENSEBUP00000004576399 (aa)--
Gene Model
Click here to download ENSEBUG00000003216's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003216's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000003216-9779.284ENSEBUG00000015959-9579.795
ENSEBUG00000003216-8769.552ENSEBUG00000003357-8673.490
ENSEBUG00000003216-6657.647ENSEBUG00000005830rbms37858.436
ENSEBUG00000003216-5035.294ENSEBUG00000000352-5335.714
ENSEBUG00000003216-5441.250ENSEBUG00000007835-5544.231
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000003216-8666.201ENSG00000076067RBMS210061.348Homo_sapiens
ENSEBUG00000003216-8673.775ENSAPOG00000023300rbms2a8773.775Acanthochromis_polyacanthus
ENSEBUG00000003216-8671.758ENSAPOG00000014215rbms2b9269.452Acanthochromis_polyacanthus
ENSEBUG00000003216-8566.469ENSAMEG00000004054RBMS28865.084Ailuropoda_melanoleuca
ENSEBUG00000003216-8668.876ENSACIG00000021779rbms2a9969.145Amphilophus_citrinellus
ENSEBUG00000003216-8772.934ENSAOCG00000008301rbms2a9274.766Amphiprion_ocellaris
ENSEBUG00000003216-8672.046ENSAOCG00000024245rbms2b8472.046Amphiprion_ocellaris
ENSEBUG00000003216-8672.334ENSAPEG00000003556rbms2b8572.334Amphiprion_percula
ENSEBUG00000003216-8772.443ENSAPEG00000010379rbms2a8772.989Amphiprion_percula
ENSEBUG00000003216-8772.934ENSATEG00000024715rbms2a8773.066Anabas_testudineus
ENSEBUG00000003216-9967.000ENSATEG00000022569rbms2b8772.622Anabas_testudineus
ENSEBUG00000003216-8669.886ENSACAG00000016623RBMS28669.886Anolis_carolinensis
ENSEBUG00000003216-8654.190ENSANAG00000038292RBMS28755.587Aotus_nancymaae
ENSEBUG00000003216-9467.590ENSACLG00000006706rbms2b8671.182Astatotilapia_calliptera
ENSEBUG00000003216-8673.761ENSACLG00000002393rbms2a9572.650Astatotilapia_calliptera
ENSEBUG00000003216-9665.395ENSAMXG00000024719rbms2a8768.895Astyanax_mexicanus
ENSEBUG00000003216-8672.414ENSAMXG00000017399rbms2b8572.414Astyanax_mexicanus
ENSEBUG00000003216-8664.426ENSBTAG00000017830RBMS28864.986Bos_taurus
ENSEBUG00000003216-7367.931ENSCJAG00000038571-6367.931Callithrix_jacchus
ENSEBUG00000003216-8663.687ENSCJAG00000010803RBMS28865.922Callithrix_jacchus
ENSEBUG00000003216-8567.964ENSCAFG00000000134RBMS28866.201Canis_familiaris
ENSEBUG00000003216-8567.964ENSCAFG00020024460RBMS29566.201Canis_lupus_dingo
ENSEBUG00000003216-8566.766ENSCHIG00000020791RBMS29263.717Capra_hircus
ENSEBUG00000003216-8665.363ENSTSYG00000001167RBMS28866.201Carlito_syrichta
ENSEBUG00000003216-8641.261ENSCAPG00000007348-9240.346Cavia_aperea
ENSEBUG00000003216-8666.106ENSCPOG00000008256RBMS28865.922Cavia_porcellus
ENSEBUG00000003216-7460.772ENSCCAG00000030291RBMS210060.284Cebus_capucinus
ENSEBUG00000003216-8666.201ENSCATG00000003342RBMS28866.480Cercocebus_atys
ENSEBUG00000003216-9761.224ENSCLAG00000012661RBMS28764.756Chinchilla_lanigera
ENSEBUG00000003216-8666.760ENSCSAG00000005074RBMS28867.039Chlorocebus_sabaeus
ENSEBUG00000003216-8647.619ENSCHOG00000007372RBMS28847.486Choloepus_hoffmanni
ENSEBUG00000003216-8670.977ENSCPBG00000014176RBMS28670.977Chrysemys_picta_bellii
ENSEBUG00000003216-8649.854ENSCING00000006391-7451.703Ciona_intestinalis
ENSEBUG00000003216-8949.133ENSCSAVG00000004539-5569.291Ciona_savignyi
ENSEBUG00000003216-8666.480ENSCANG00000038904RBMS28866.760Colobus_angolensis_palliatus
ENSEBUG00000003216-9760.459ENSCGRG00001023923Rbms28765.230Cricetulus_griseus_chok1gshd
ENSEBUG00000003216-9760.459ENSCGRG00000017259Rbms28765.230Cricetulus_griseus_crigri
ENSEBUG00000003216-8663.977ENSCSEG00000003790rbms2a7081.667Cynoglossus_semilaevis
ENSEBUG00000003216-8671.182ENSCSEG00000008180rbms2b9468.588Cynoglossus_semilaevis
ENSEBUG00000003216-9565.565ENSCVAG00000013006rbms2b9368.966Cyprinodon_variegatus
ENSEBUG00000003216-8474.143ENSCVAG00000001635rbms2a8772.046Cyprinodon_variegatus
ENSEBUG00000003216-8472.897ENSDARG00000044179rbms2a8870.115Danio_rerio
ENSEBUG00000003216-8672.126ENSDARG00000056150rbms2b8772.126Danio_rerio
ENSEBUG00000003216-8656.389ENSDNOG00000011198RBMS28856.510Dasypus_novemcinctus
ENSEBUG00000003216-8656.704ENSDORG00000009231Rbms28856.704Dipodomys_ordii
ENSEBUG00000003216-6770.466ENSETEG00000010200RBMS26770.103Echinops_telfairi
ENSEBUG00000003216-8666.667ENSEASG00005005834RBMS28866.760Equus_asinus_asinus
ENSEBUG00000003216-8568.563ENSECAG00000013470RBMS29066.201Equus_caballus
ENSEBUG00000003216-9663.846ENSELUG00000007892rbms2b9068.391Esox_lucius
ENSEBUG00000003216-9771.717ENSELUG00000019834rbms2a8772.622Esox_lucius
ENSEBUG00000003216-8567.665ENSFCAG00000012028RBMS28865.922Felis_catus
ENSEBUG00000003216-8766.289ENSFDAG00000009949RBMS28766.476Fukomys_damarensis
ENSEBUG00000003216-8672.622ENSFHEG00000022377rbms2a8772.622Fundulus_heteroclitus
ENSEBUG00000003216-8670.115ENSFHEG00000023377rbms2b8570.115Fundulus_heteroclitus
ENSEBUG00000003216-9961.750ENSGMOG00000005250rbms2b8566.762Gadus_morhua
ENSEBUG00000003216-7774.237ENSGALG00000038757RBMS28767.919Gallus_gallus
ENSEBUG00000003216-8668.391ENSGAFG00000009648rbms2b8568.391Gambusia_affinis
ENSEBUG00000003216-8671.758ENSGAFG00000002548rbms2a9271.758Gambusia_affinis
ENSEBUG00000003216-8668.300ENSGACG00000009332rbms2b8468.300Gasterosteus_aculeatus
ENSEBUG00000003216-8673.775ENSGACG00000000617rbms2a8773.775Gasterosteus_aculeatus
ENSEBUG00000003216-8671.264ENSGAGG00000000381RBMS28771.264Gopherus_agassizii
ENSEBUG00000003216-8664.183ENSGGOG00000028247-9361.605Gorilla_gorilla
ENSEBUG00000003216-8665.706ENSHBUG00000023230rbms2a7783.333Haplochromis_burtoni
ENSEBUG00000003216-9555.291ENSHBUG00000005313rbms2b9160.399Haplochromis_burtoni
ENSEBUG00000003216-8766.851ENSHGLG00000018238RBMS28867.318Heterocephalus_glaber_female
ENSEBUG00000003216-8766.851ENSHGLG00100011594RBMS28867.318Heterocephalus_glaber_male
ENSEBUG00000003216-8474.224ENSHCOG00000020072rbms2a8474.455Hippocampus_comes
ENSEBUG00000003216-9765.990ENSHCOG00000019929rbms2b8570.029Hippocampus_comes
ENSEBUG00000003216-8473.209ENSIPUG00000001757rbms2a8770.893Ictalurus_punctatus
ENSEBUG00000003216-8472.981ENSIPUG00000021323RBMS29568.966Ictalurus_punctatus
ENSEBUG00000003216-8666.201ENSSTOG00000013442RBMS28866.201Ictidomys_tridecemlineatus
ENSEBUG00000003216-8663.202ENSJJAG00000015563-8863.202Jaculus_jaculus
ENSEBUG00000003216-9759.850ENSJJAG00000015940-8863.866Jaculus_jaculus
ENSEBUG00000003216-8668.588ENSKMAG00000021167rbms2b8768.588Kryptolebias_marmoratus
ENSEBUG00000003216-8670.317ENSLBEG00000010843rbms2b9960.140Labrus_bergylta
ENSEBUG00000003216-8673.199ENSLBEG00000017716rbms2a9367.930Labrus_bergylta
ENSEBUG00000003216-8662.570ENSLACG00000018651RBMS28862.570Latimeria_chalumnae
ENSEBUG00000003216-8675.000ENSLOCG00000006148rbms2a8775.862Lepisosteus_oculatus
ENSEBUG00000003216-8667.529ENSLAFG00000008251RBMS28768.481Loxodonta_africana
ENSEBUG00000003216-8665.642ENSMFAG00000002049RBMS28865.922Macaca_fascicularis
ENSEBUG00000003216-8665.922ENSMMUG00000019330RBMS28866.201Macaca_mulatta
ENSEBUG00000003216-8665.922ENSMNEG00000035121RBMS28866.201Macaca_nemestrina
ENSEBUG00000003216-8666.201ENSMLEG00000032780RBMS28866.480Mandrillus_leucophaeus
ENSEBUG00000003216-8673.487ENSMAMG00000003821rbms2a9468.805Mastacembelus_armatus
ENSEBUG00000003216-8867.671ENSMAMG00000007264rbms2b8967.978Mastacembelus_armatus
ENSEBUG00000003216-9467.590ENSMZEG00005027195rbms2b8671.182Maylandia_zebra
ENSEBUG00000003216-8673.487ENSMZEG00005006839rbms2a8773.487Maylandia_zebra
ENSEBUG00000003216-6552.453ENSMAUG00000016984Rbms210052.830Mesocricetus_auratus
ENSEBUG00000003216-8666.295ENSMICG00000001075RBMS28866.574Microcebus_murinus
ENSEBUG00000003216-9760.459ENSMOCG00000015140Rbms28765.330Microtus_ochrogaster
ENSEBUG00000003216-8672.334ENSMMOG00000009177rbms2b9472.334Mola_mola
ENSEBUG00000003216-8662.824ENSMMOG00000021869rbms2a9462.824Mola_mola
ENSEBUG00000003216-8673.487ENSMALG00000016900rbms2a8773.487Monopterus_albus
ENSEBUG00000003216-8672.046ENSMALG00000014520rbms2b8572.046Monopterus_albus
ENSEBUG00000003216-8466.563MGP_CAROLIEiJ_G0015921Rbms28764.470Mus_caroli
ENSEBUG00000003216-8565.846ENSMUSG00000040043Rbms29464.183Mus_musculus
ENSEBUG00000003216-9362.222MGP_PahariEiJ_G0031163Rbms28864.286Mus_pahari
ENSEBUG00000003216-8565.846MGP_SPRETEiJ_G0016746Rbms28764.183Mus_spretus
ENSEBUG00000003216-9760.848ENSMPUG00000001490-8865.363Mustela_putorius_furo
ENSEBUG00000003216-8468.072ENSMLUG00000000530RBMS28865.084Myotis_lucifugus
ENSEBUG00000003216-8666.574ENSNGAG00000001476Rbms28866.574Nannospalax_galili
ENSEBUG00000003216-8470.279ENSNBRG00000017934rbms2b8969.817Neolamprologus_brichardi
ENSEBUG00000003216-8673.775ENSNBRG00000019651rbms2a8773.775Neolamprologus_brichardi
ENSEBUG00000003216-8666.480ENSNLEG00000017466RBMS28866.760Nomascus_leucogenys
ENSEBUG00000003216-8570.079ENSMEUG00000015616RBMS27480.476Notamacropus_eugenii
ENSEBUG00000003216-5286.275ENSOPRG00000001667RBMS25286.275Ochotona_princeps
ENSEBUG00000003216-8759.375ENSODEG00000006249RBMS28267.568Octodon_degus
ENSEBUG00000003216-8574.383ENSONIG00000019162rbms2a8774.845Oreochromis_niloticus
ENSEBUG00000003216-8669.663ENSONIG00000012198rbms2b8569.663Oreochromis_niloticus
ENSEBUG00000003216-8664.706ENSOCUG00000006073RBMS28864.525Oryctolagus_cuniculus
ENSEBUG00000003216-8672.911ENSORLG00000015426rbms2a9572.911Oryzias_latipes
ENSEBUG00000003216-9566.209ENSORLG00000007807rbms2b8570.462Oryzias_latipes
ENSEBUG00000003216-9565.544ENSORLG00020007010rbms2b8569.452Oryzias_latipes_hni
ENSEBUG00000003216-8672.911ENSORLG00020016803rbms2a9070.520Oryzias_latipes_hni
ENSEBUG00000003216-9565.803ENSORLG00015022556rbms2b8969.741Oryzias_latipes_hsok
ENSEBUG00000003216-8672.911ENSORLG00015012519rbms2a9070.520Oryzias_latipes_hsok
ENSEBUG00000003216-5862.727ENSOMEG00000014637-8262.727Oryzias_melastigma
ENSEBUG00000003216-8672.622ENSOMEG00000021369rbms2a9572.622Oryzias_melastigma
ENSEBUG00000003216-8868.908ENSOMEG00000016468rbms2b9369.741Oryzias_melastigma
ENSEBUG00000003216-8665.546ENSOGAG00000003534RBMS28865.642Otolemur_garnettii
ENSEBUG00000003216-8567.066ENSOARG00000008570RBMS28865.363Ovis_aries
ENSEBUG00000003216-8666.480ENSPPAG00000042975-8866.760Pan_paniscus
ENSEBUG00000003216-8665.084ENSPPAG00000033767-9065.363Pan_paniscus
ENSEBUG00000003216-8567.365ENSPPRG00000007678RBMS210060.638Panthera_pardus
ENSEBUG00000003216-8567.665ENSPTIG00000017925RBMS210060.993Panthera_tigris_altaica
ENSEBUG00000003216-8666.480ENSPTRG00000005104RBMS28866.760Pan_troglodytes
ENSEBUG00000003216-8666.201ENSPANG00000014113RBMS28866.480Papio_anubis
ENSEBUG00000003216-8476.012ENSPKIG00000006676rbms2a8773.563Paramormyrops_kingsleyae
ENSEBUG00000003216-8470.938ENSPMGG00000022594rbms2a8669.591Periophthalmus_magnuspinnatus
ENSEBUG00000003216-9762.000ENSPEMG00000012948Rbms28866.292Peromyscus_maniculatus_bairdii
ENSEBUG00000003216-7584.146ENSPMAG00000004916-10068.997Petromyzon_marinus
ENSEBUG00000003216-9566.053ENSPMAG00000007358-9265.617Petromyzon_marinus
ENSEBUG00000003216-5063.710ENSPMAG00000006727-6282.278Petromyzon_marinus
ENSEBUG00000003216-9676.640ENSPMAG00000004019-9672.577Petromyzon_marinus
ENSEBUG00000003216-8066.154ENSPCIG00000018048RBMS29866.154Phascolarctos_cinereus
ENSEBUG00000003216-9561.433ENSPFOG00000002923rbms2b9362.637Poecilia_formosa
ENSEBUG00000003216-8672.334ENSPFOG00000002734rbms2a8772.334Poecilia_formosa
ENSEBUG00000003216-8672.334ENSPLAG00000001303rbms2a9072.334Poecilia_latipinna
ENSEBUG00000003216-9565.014ENSPLAG00000012535-8569.253Poecilia_latipinna
ENSEBUG00000003216-9552.897ENSPMEG00000015689rbms2b8755.710Poecilia_mexicana
ENSEBUG00000003216-8672.334ENSPMEG00000020550rbms2a8772.334Poecilia_mexicana
ENSEBUG00000003216-8663.218ENSPREG00000020560rbms2b9162.921Poecilia_reticulata
ENSEBUG00000003216-8663.689ENSPREG00000015038rbms2a7778.039Poecilia_reticulata
ENSEBUG00000003216-8666.480ENSPPYG00000004665RBMS28866.760Pongo_abelii
ENSEBUG00000003216-8659.944ENSPCAG00000010311RBMS28858.380Procavia_capensis
ENSEBUG00000003216-8666.201ENSPCOG00000016699-8866.480Propithecus_coquereli
ENSEBUG00000003216-6654.152ENSPCOG00000014899-10054.152Propithecus_coquereli
ENSEBUG00000003216-8666.854ENSPVAG00000007616RBMS28866.947Pteropus_vampyrus
ENSEBUG00000003216-9467.867ENSPNYG00000017656rbms2b8671.470Pundamilia_nyererei
ENSEBUG00000003216-8673.775ENSPNYG00000020829rbms2a8773.775Pundamilia_nyererei
ENSEBUG00000003216-9767.176ENSPNAG00000000408rbms2a8772.911Pygocentrus_nattereri
ENSEBUG00000003216-8673.276ENSPNAG00000019569rbms2b9470.690Pygocentrus_nattereri
ENSEBUG00000003216-9461.735ENSRNOG00000003076Rbms28865.363Rattus_norvegicus
ENSEBUG00000003216-8666.201ENSRBIG00000036293RBMS28866.480Rhinopithecus_bieti
ENSEBUG00000003216-8666.201ENSRROG00000044831RBMS29566.480Rhinopithecus_roxellana
ENSEBUG00000003216-8659.078ENSSBOG00000028640RBMS210053.137Saimiri_boliviensis_boliviensis
ENSEBUG00000003216-5482.381ENSSHAG00000004939RBMS28682.381Sarcophilus_harrisii
ENSEBUG00000003216-8676.369ENSSFOG00015006642-9275.071Scleropages_formosus
ENSEBUG00000003216-8673.199ENSSFOG00015015788rbms2a9570.029Scleropages_formosus
ENSEBUG00000003216-9966.667ENSSMAG00000004221rbms2b8771.429Scophthalmus_maximus
ENSEBUG00000003216-8670.029ENSSMAG00000003683rbms2a9570.029Scophthalmus_maximus
ENSEBUG00000003216-8672.911ENSSDUG00000013574rbms2b8472.911Seriola_dumerili
ENSEBUG00000003216-8673.487ENSSDUG00000005666rbms2a9371.472Seriola_dumerili
ENSEBUG00000003216-8672.911ENSSLDG00000004447rbms2b9171.296Seriola_lalandi_dorsalis
ENSEBUG00000003216-8673.487ENSSLDG00000003394rbms2a9371.472Seriola_lalandi_dorsalis
ENSEBUG00000003216-6683.077ENSSARG00000012553RBMS26982.443Sorex_araneus
ENSEBUG00000003216-8673.487ENSSPAG00000000639rbms2a9570.317Stegastes_partitus
ENSEBUG00000003216-8672.046ENSSPAG00000022418rbms2b8572.046Stegastes_partitus
ENSEBUG00000003216-8567.463ENSSSCG00000000402RBMS28865.738Sus_scrofa
ENSEBUG00000003216-8672.543ENSTRUG00000008492rbms2a8772.543Takifugu_rubripes
ENSEBUG00000003216-8770.621ENSTRUG00000006839rbms2b9270.893Takifugu_rubripes
ENSEBUG00000003216-8870.506ENSTNIG00000015056rbms2b8771.182Tetraodon_nigroviridis
ENSEBUG00000003216-8372.981ENSTNIG00000014563rbms2a8968.132Tetraodon_nigroviridis
ENSEBUG00000003216-6581.646ENSTBEG00000009515RBMS26581.646Tupaia_belangeri
ENSEBUG00000003216-8661.003ENSTTRG00000002117RBMS28861.560Tursiops_truncatus
ENSEBUG00000003216-8566.469ENSUAMG00000021435RBMS29064.804Ursus_americanus
ENSEBUG00000003216-8566.467ENSUMAG00000017426RBMS28070.164Ursus_maritimus
ENSEBUG00000003216-8468.882ENSVPAG00000004022RBMS28768.675Vicugna_pacos
ENSEBUG00000003216-8567.665ENSVVUG00000021554RBMS28865.922Vulpes_vulpes
ENSEBUG00000003216-8567.630ENSXETG00000021787rbms29967.033Xenopus_tropicalis
ENSEBUG00000003216-8661.207ENSXCOG00000018635rbms2a9964.662Xiphophorus_couchianus
ENSEBUG00000003216-8469.444ENSXCOG00000006995rbms2b8869.659Xiphophorus_couchianus
ENSEBUG00000003216-8668.678ENSXMAG00000011428rbms2b9268.678Xiphophorus_maculatus
ENSEBUG00000003216-8672.046ENSXMAG00000002318rbms2a9572.046Xiphophorus_maculatus

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