EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSEBUG00000003290 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: vas|vasa|vlg|wu:fi24g05|zgc:109812|zgc:158535
Full Name: -
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Plus strand
Length: 20483 bases
Position: chrFYBX02009583.1:21406-41888
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004778	DEAD	PF00270.29	4e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005215	-	1500	-	ENSEBUP00000004778	499 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSEBUG00000003290	-	71	33.875	ENSEBUG00000007071	ddx55	59	33.523
ENSEBUG00000003290	-	69	46.797	ENSEBUG00000007692	ddx3xa	64	46.797
ENSEBUG00000003290	-	81	38.575	ENSEBUG00000004340	ddx5	68	38.821
ENSEBUG00000003290	-	81	31.116	ENSEBUG00000007713	ddx59	68	30.521
ENSEBUG00000003290	-	76	30.752	ENSEBUG00000016425	ddx51	76	30.752
ENSEBUG00000003290	-	79	38.679	ENSEBUG00000003319	ddx23	60	38.679
ENSEBUG00000003290	-	83	32.464	ENSEBUG00000004326	ddx27	62	32.464
ENSEBUG00000003290	-	81	37.772	ENSEBUG00000002053	DDX41	66	37.923
ENSEBUG00000003290	-	74	40.701	ENSEBUG00000011578	ddx5	55	40.701
ENSEBUG00000003290	-	73	31.129	ENSEBUG00000009705	eif4a1b	77	31.129
ENSEBUG00000003290	-	74	30.108	ENSEBUG00000010042	ddx39aa	80	30.108
ENSEBUG00000003290	-	75	33.073	ENSEBUG00000003713	eif4a3	83	33.073
ENSEBUG00000003290	-	81	50.483	ENSEBUG00000014402	-	62	50.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003290	-	84	52.765	ENSG00000152670	DDX4	73	52.535	Homo_sapiens
ENSEBUG00000003290	-	69	52.450	ENSAPOG00000021394	ddx4	83	52.450	Acanthochromis_polyacanthus
ENSEBUG00000003290	-	84	53.456	ENSAMEG00000013960	DDX4	58	53.456	Ailuropoda_melanoleuca
ENSEBUG00000003290	-	69	54.755	ENSACIG00000017623	ddx4	91	52.406	Amphilophus_citrinellus
ENSEBUG00000003290	-	69	55.331	ENSAPEG00000008490	ddx4	84	55.331	Amphiprion_percula
ENSEBUG00000003290	-	69	56.484	ENSATEG00000011704	ddx4	85	56.897	Anabas_testudineus
ENSEBUG00000003290	-	82	53.995	ENSAPLG00000011662	DDX4	90	53.995	Anas_platyrhynchos
ENSEBUG00000003290	-	82	55.797	ENSACAG00000014951	DDX4	58	55.797	Anolis_carolinensis
ENSEBUG00000003290	-	84	53.456	ENSANAG00000029060	DDX4	61	53.456	Aotus_nancymaae
ENSEBUG00000003290	-	82	54.458	ENSACLG00000007422	ddx4	67	54.458	Astatotilapia_calliptera
ENSEBUG00000003290	-	83	52.326	ENSAMXG00000010288	ddx4	64	52.668	Astyanax_mexicanus
ENSEBUG00000003290	-	84	53.456	ENSBTAG00000008871	DDX4	62	53.456	Bos_taurus
ENSEBUG00000003290	-	84	44.186	WBGene00001598	glh-1	56	44.186	Caenorhabditis_elegans
ENSEBUG00000003290	-	84	44.316	WBGene00001600	glh-3	60	44.316	Caenorhabditis_elegans
ENSEBUG00000003290	-	84	52.995	ENSCJAG00000001951	DDX4	73	52.995	Callithrix_jacchus
ENSEBUG00000003290	-	84	52.995	ENSCAFG00000006875	DDX4	58	52.995	Canis_familiaris
ENSEBUG00000003290	-	84	52.995	ENSCAFG00020024295	DDX4	64	52.995	Canis_lupus_dingo
ENSEBUG00000003290	-	84	53.456	ENSCHIG00000015567	DDX4	59	53.456	Capra_hircus
ENSEBUG00000003290	-	84	53.456	ENSTSYG00000011848	DDX4	74	53.456	Carlito_syrichta
ENSEBUG00000003290	-	69	45.070	ENSCPOG00000004327	DDX4	51	45.070	Cavia_porcellus
ENSEBUG00000003290	-	84	53.226	ENSCCAG00000028725	DDX4	61	53.226	Cebus_capucinus
ENSEBUG00000003290	-	84	52.535	ENSCATG00000044303	DDX4	73	52.535	Cercocebus_atys
ENSEBUG00000003290	-	84	52.765	ENSCLAG00000005386	DDX4	60	52.765	Chinchilla_lanigera
ENSEBUG00000003290	-	84	52.535	ENSCSAG00000016336	DDX4	57	52.535	Chlorocebus_sabaeus
ENSEBUG00000003290	-	71	60.000	ENSCHOG00000000200	DDX4	50	60.000	Choloepus_hoffmanni
ENSEBUG00000003290	-	82	53.735	ENSCPBG00000026547	DDX4	69	53.735	Chrysemys_picta_bellii
ENSEBUG00000003290	-	89	46.358	ENSCING00000001412	-	77	46.358	Ciona_intestinalis
ENSEBUG00000003290	-	81	54.015	ENSCSAVG00000004304	-	63	53.771	Ciona_savignyi
ENSEBUG00000003290	-	84	46.774	ENSCANG00000003129	DDX4	71	47.005	Colobus_angolensis_palliatus
ENSEBUG00000003290	-	84	52.995	ENSCGRG00001014961	Ddx4	60	52.995	Cricetulus_griseus_chok1gshd
ENSEBUG00000003290	-	84	52.995	ENSCGRG00000001251	Ddx4	60	52.995	Cricetulus_griseus_crigri
ENSEBUG00000003290	-	82	51.449	ENSCSEG00000006039	ddx4	59	51.449	Cynoglossus_semilaevis
ENSEBUG00000003290	-	83	53.023	ENSDARG00000014373	ddx4	61	53.023	Danio_rerio
ENSEBUG00000003290	-	84	51.835	ENSDNOG00000011658	DDX4	61	51.606	Dasypus_novemcinctus
ENSEBUG00000003290	-	84	52.765	ENSDORG00000012201	Ddx4	60	52.765	Dipodomys_ordii
ENSEBUG00000003290	-	81	48.775	FBgn0283442	vas	59	48.775	Drosophila_melanogaster
ENSEBUG00000003290	-	84	53.226	ENSEASG00005012143	DDX4	66	53.226	Equus_asinus_asinus
ENSEBUG00000003290	-	84	53.349	ENSECAG00000023616	DDX4	66	53.226	Equus_caballus
ENSEBUG00000003290	-	76	54.047	ENSEEUG00000012462	DDX4	51	54.047	Erinaceus_europaeus
ENSEBUG00000003290	-	84	53.613	ENSELUG00000017328	ddx4	67	52.915	Esox_lucius
ENSEBUG00000003290	-	84	53.917	ENSFCAG00000012560	DDX4	74	53.917	Felis_catus
ENSEBUG00000003290	-	82	53.140	ENSFALG00000010910	DDX4	54	53.140	Ficedula_albicollis
ENSEBUG00000003290	-	84	52.752	ENSFDAG00000003703	DDX4	60	52.752	Fukomys_damarensis
ENSEBUG00000003290	-	82	53.606	ENSFHEG00000019935	ddx4	64	53.606	Fundulus_heteroclitus
ENSEBUG00000003290	-	82	51.932	ENSGALG00000014713	DDX4	60	51.932	Gallus_gallus
ENSEBUG00000003290	-	82	54.217	ENSGAFG00000016509	ddx4	63	54.217	Gambusia_affinis
ENSEBUG00000003290	-	82	54.699	ENSGACG00000015323	ddx4	83	54.699	Gasterosteus_aculeatus
ENSEBUG00000003290	-	52	50.189	ENSGAGG00000007953	-	88	50.189	Gopherus_agassizii
ENSEBUG00000003290	-	84	52.765	ENSGGOG00000002439	DDX4	73	52.765	Gorilla_gorilla
ENSEBUG00000003290	-	82	54.458	ENSHBUG00000001897	ddx4	68	54.458	Haplochromis_burtoni
ENSEBUG00000003290	-	84	47.005	ENSHGLG00000003594	DDX4	58	47.005	Heterocephalus_glaber_female
ENSEBUG00000003290	-	82	52.771	ENSHCOG00000018337	ddx4	68	52.771	Hippocampus_comes
ENSEBUG00000003290	-	83	53.846	ENSIPUG00000001845	ddx4	69	53.846	Ictalurus_punctatus
ENSEBUG00000003290	-	84	53.226	ENSSTOG00000021044	DDX4	60	53.226	Ictidomys_tridecemlineatus
ENSEBUG00000003290	-	84	53.226	ENSJJAG00000015867	Ddx4	60	53.226	Jaculus_jaculus
ENSEBUG00000003290	-	82	53.012	ENSKMAG00000012439	ddx4	63	53.494	Kryptolebias_marmoratus
ENSEBUG00000003290	-	89	50.881	ENSLBEG00000019504	ddx4	66	52.164	Labrus_bergylta
ENSEBUG00000003290	-	82	54.458	ENSLOCG00000010887	ddx4	84	54.458	Lepisosteus_oculatus
ENSEBUG00000003290	-	84	53.456	ENSLAFG00000005900	DDX4	60	53.456	Loxodonta_africana
ENSEBUG00000003290	-	84	52.535	ENSMFAG00000040186	DDX4	73	52.535	Macaca_fascicularis
ENSEBUG00000003290	-	84	52.535	ENSMMUG00000017386	DDX4	73	52.535	Macaca_mulatta
ENSEBUG00000003290	-	84	52.535	ENSMNEG00000033343	DDX4	73	52.535	Macaca_nemestrina
ENSEBUG00000003290	-	84	47.696	ENSMLEG00000038233	DDX4	75	47.926	Mandrillus_leucophaeus
ENSEBUG00000003290	-	69	56.484	ENSMAMG00000003574	ddx4	85	56.484	Mastacembelus_armatus
ENSEBUG00000003290	-	82	54.458	ENSMZEG00005019116	ddx4	69	54.458	Maylandia_zebra
ENSEBUG00000003290	-	84	47.926	ENSMAUG00000019873	Ddx4	61	48.157	Mesocricetus_auratus
ENSEBUG00000003290	-	71	45.983	ENSMICG00000028132	-	58	46.537	Microcebus_murinus
ENSEBUG00000003290	-	84	52.995	ENSMICG00000008994	-	73	52.995	Microcebus_murinus
ENSEBUG00000003290	-	84	53.456	ENSMOCG00000013250	Ddx4	60	53.456	Microtus_ochrogaster
ENSEBUG00000003290	-	86	52.500	ENSMMOG00000004689	ddx4	76	52.500	Mola_mola
ENSEBUG00000003290	-	84	53.226	ENSMODG00000019511	DDX4	58	53.226	Monodelphis_domestica
ENSEBUG00000003290	-	85	52.715	MGP_CAROLIEiJ_G0018893	Ddx4	61	52.715	Mus_caroli
ENSEBUG00000003290	-	85	52.489	ENSMUSG00000021758	Ddx4	61	52.715	Mus_musculus
ENSEBUG00000003290	-	85	52.715	MGP_PahariEiJ_G0015964	Ddx4	61	52.715	Mus_pahari
ENSEBUG00000003290	-	85	52.489	MGP_SPRETEiJ_G0019772	Ddx4	61	52.489	Mus_spretus
ENSEBUG00000003290	-	84	53.456	ENSMPUG00000007596	DDX4	58	53.687	Mustela_putorius_furo
ENSEBUG00000003290	-	84	52.765	ENSMLUG00000001189	DDX4	59	52.027	Myotis_lucifugus
ENSEBUG00000003290	-	83	53.009	ENSNGAG00000013259	Ddx4	60	53.009	Nannospalax_galili
ENSEBUG00000003290	-	82	52.657	ENSNBRG00000014442	ddx4	84	51.297	Neolamprologus_brichardi
ENSEBUG00000003290	-	84	52.995	ENSNLEG00000001662	DDX4	73	52.995	Nomascus_leucogenys
ENSEBUG00000003290	-	64	32.817	ENSOPRG00000008071	DDX4	57	32.817	Ochotona_princeps
ENSEBUG00000003290	-	84	52.304	ENSODEG00000003839	-	64	52.304	Octodon_degus
ENSEBUG00000003290	-	83	52.778	ENSODEG00000016951	-	61	52.778	Octodon_degus
ENSEBUG00000003290	-	82	53.976	ENSONIG00000012063	ddx4	84	53.976	Oreochromis_niloticus
ENSEBUG00000003290	-	71	52.186	ENSOANG00000004888	-	89	52.186	Ornithorhynchus_anatinus
ENSEBUG00000003290	-	84	52.995	ENSOCUG00000008597	DDX4	58	52.995	Oryctolagus_cuniculus
ENSEBUG00000003290	-	90	51.957	ENSORLG00000020672	ddx4	65	55.181	Oryzias_latipes
ENSEBUG00000003290	-	90	51.957	ENSORLG00020014206	ddx4	65	54.940	Oryzias_latipes_hni
ENSEBUG00000003290	-	90	51.957	ENSORLG00015016600	ddx4	65	55.181	Oryzias_latipes_hsok
ENSEBUG00000003290	-	82	54.348	ENSOMEG00000010651	ddx4	69	52.715	Oryzias_melastigma
ENSEBUG00000003290	-	84	53.226	ENSOGAG00000007588	DDX4	58	53.226	Otolemur_garnettii
ENSEBUG00000003290	-	84	53.456	ENSOARG00000007644	DDX4	58	53.456	Ovis_aries
ENSEBUG00000003290	-	84	52.535	ENSPPAG00000033915	DDX4	73	52.765	Pan_paniscus
ENSEBUG00000003290	-	84	53.687	ENSPPRG00000011417	DDX4	61	53.687	Panthera_pardus
ENSEBUG00000003290	-	84	53.687	ENSPTIG00000007748	DDX4	72	51.389	Panthera_tigris_altaica
ENSEBUG00000003290	-	84	52.535	ENSPTRG00000016884	DDX4	73	52.765	Pan_troglodytes
ENSEBUG00000003290	-	84	52.535	ENSPANG00000010945	DDX4	73	52.535	Papio_anubis
ENSEBUG00000003290	-	83	53.538	ENSPSIG00000017179	DDX4	68	53.538	Pelodiscus_sinensis
ENSEBUG00000003290	-	69	50.578	ENSPMGG00000015642	ddx4	84	50.578	Periophthalmus_magnuspinnatus
ENSEBUG00000003290	-	84	53.226	ENSPEMG00000010086	Ddx4	60	53.226	Peromyscus_maniculatus_bairdii
ENSEBUG00000003290	-	84	52.995	ENSPCIG00000024758	DDX4	64	52.995	Phascolarctos_cinereus
ENSEBUG00000003290	-	82	53.735	ENSPFOG00000018842	ddx4	63	53.735	Poecilia_formosa
ENSEBUG00000003290	-	82	53.735	ENSPLAG00000020726	ddx4	63	53.735	Poecilia_latipinna
ENSEBUG00000003290	-	82	53.735	ENSPMEG00000002976	ddx4	65	53.735	Poecilia_mexicana
ENSEBUG00000003290	-	82	53.735	ENSPREG00000017840	ddx4	65	53.735	Poecilia_reticulata
ENSEBUG00000003290	-	84	52.765	ENSPPYG00000015472	DDX4	58	52.765	Pongo_abelii
ENSEBUG00000003290	-	77	56.010	ENSPCAG00000002675	DDX4	53	56.010	Procavia_capensis
ENSEBUG00000003290	-	84	53.226	ENSPVAG00000002448	DDX4	60	53.226	Pteropus_vampyrus
ENSEBUG00000003290	-	82	54.458	ENSPNYG00000022212	ddx4	69	54.458	Pundamilia_nyererei
ENSEBUG00000003290	-	82	54.348	ENSPNAG00000003686	ddx4	64	54.458	Pygocentrus_nattereri
ENSEBUG00000003290	-	84	53.226	ENSRNOG00000026686	Ddx4	59	53.226	Rattus_norvegicus
ENSEBUG00000003290	-	84	52.765	ENSRBIG00000028795	DDX4	73	52.765	Rhinopithecus_bieti
ENSEBUG00000003290	-	84	52.765	ENSRROG00000045392	DDX4	73	52.765	Rhinopithecus_roxellana
ENSEBUG00000003290	-	82	47.045	YPL119C	DBP1	66	47.045	Saccharomyces_cerevisiae
ENSEBUG00000003290	-	84	53.456	ENSSBOG00000035231	DDX4	61	53.456	Saimiri_boliviensis_boliviensis
ENSEBUG00000003290	-	84	53.456	ENSSHAG00000009132	DDX4	59	53.456	Sarcophilus_harrisii
ENSEBUG00000003290	-	81	55.314	ENSSFOG00015006531	ddx4	62	55.314	Scleropages_formosus
ENSEBUG00000003290	-	90	49.892	ENSSMAG00000009800	ddx4	67	51.945	Scophthalmus_maximus
ENSEBUG00000003290	-	82	53.976	ENSSDUG00000022015	ddx4	64	54.327	Seriola_dumerili
ENSEBUG00000003290	-	69	56.196	ENSSLDG00000015312	ddx4	85	56.196	Seriola_lalandi_dorsalis
ENSEBUG00000003290	-	76	55.471	ENSSARG00000004206	DDX4	52	55.471	Sorex_araneus
ENSEBUG00000003290	-	84	53.288	ENSSPUG00000007260	DDX4	73	53.288	Sphenodon_punctatus
ENSEBUG00000003290	-	69	55.043	ENSSPAG00000014307	ddx4	84	55.043	Stegastes_partitus
ENSEBUG00000003290	-	84	52.995	ENSSSCG00000016913	DDX4	58	52.995	Sus_scrofa
ENSEBUG00000003290	-	83	51.781	ENSTGUG00000002548	DDX4	93	51.781	Taeniopygia_guttata
ENSEBUG00000003290	-	93	43.933	ENSTNIG00000014474	ddx4	82	43.763	Tetraodon_nigroviridis
ENSEBUG00000003290	-	83	53.009	ENSTTRG00000009316	DDX4	58	53.009	Tursiops_truncatus
ENSEBUG00000003290	-	84	53.456	ENSUAMG00000023028	DDX4	64	53.456	Ursus_americanus
ENSEBUG00000003290	-	84	53.456	ENSUMAG00000009291	DDX4	64	53.456	Ursus_maritimus
ENSEBUG00000003290	-	84	52.995	ENSVPAG00000009491	DDX4	58	52.995	Vicugna_pacos
ENSEBUG00000003290	-	84	53.226	ENSVVUG00000021369	DDX4	61	53.226	Vulpes_vulpes
ENSEBUG00000003290	-	82	50.600	ENSXETG00000030832	DDX4	64	50.358	Xenopus_tropicalis
ENSEBUG00000003290	-	82	53.735	ENSXMAG00000009677	ddx4	66	53.735	Xiphophorus_maculatus