EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSEBUG00000003357 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
SCR3
Full Name
-
Gene Type
protein_coding
Species
Eptatretus_burgeri
Status
putative
Strand
Plus strand
Length
565550 bases
Position
chrFYBX02010241.1:61773-627322
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSEBUP00000004912RRM_1PF00076.222.5e-3112
ENSEBUP00000004912RRM_1PF00076.222.5e-3122
ENSEBUP00000004876RRM_1PF00076.222.6e-3112
ENSEBUP00000004876RRM_1PF00076.222.6e-3122
ENSEBUP00000004857RRM_1PF00076.223e-3112
ENSEBUP00000004857RRM_1PF00076.223e-3122
ENSEBUP00000004827RRM_1PF00076.223.5e-3112
ENSEBUP00000004827RRM_1PF00076.223.5e-3122
ENSEBUP00000004840RRM_1PF00076.223.5e-3112
ENSEBUP00000004840RRM_1PF00076.223.5e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSEBUT00000005295-3201-ENSEBUP00000004857370 (aa)--
ENSEBUT00000005278-3252-ENSEBUP00000004840387 (aa)--
ENSEBUT00000005350-1644-ENSEBUP00000004912347 (aa)--
ENSEBUT00000005265-5303-ENSEBUP00000004827387 (aa)--
ENSEBUT00000005314-3144-ENSEBUP00000004876351 (aa)--
Gene Model
Click here to download ENSEBUG00000003357's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003357's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSEBUG00000003357-5037.017ENSEBUG00000008179-5735.096
ENSEBUG00000003357-8673.490ENSEBUG00000003216-8769.552
ENSEBUG00000003357-7855.351ENSEBUG00000005830rbms38855.720
ENSEBUG00000003357-5136.957ENSEBUG00000016008elavl26636.957
ENSEBUG00000003357-5335.802ENSEBUG00000007835-5636.250
ENSEBUG00000003357-9170.704ENSEBUG00000015959-9169.355
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSEBUG00000003357-9863.198ENSG00000076067RBMS210060.000Homo_sapiens
ENSEBUG00000003357-9072.286ENSAPOG00000023300rbms2a9767.347Acanthochromis_polyacanthus
ENSEBUG00000003357-9068.286ENSAPOG00000014215rbms2b9468.713Acanthochromis_polyacanthus
ENSEBUG00000003357-9861.929ENSAMEG00000004054RBMS29762.437Ailuropoda_melanoleuca
ENSEBUG00000003357-8572.391ENSACIG00000021779rbms2a9965.809Amphilophus_citrinellus
ENSEBUG00000003357-9072.159ENSAOCG00000008301rbms2a9473.795Amphiprion_ocellaris
ENSEBUG00000003357-8672.575ENSAOCG00000024245rbms2b8668.347Amphiprion_ocellaris
ENSEBUG00000003357-9071.671ENSAPEG00000010379rbms2a9568.407Amphiprion_percula
ENSEBUG00000003357-8672.910ENSAPEG00000003556rbms2b8668.820Amphiprion_percula
ENSEBUG00000003357-9072.650ENSATEG00000024715rbms2a9569.372Anabas_testudineus
ENSEBUG00000003357-9167.887ENSATEG00000022569rbms2b10062.750Anabas_testudineus
ENSEBUG00000003357-8672.910ENSACAG00000016623RBMS29664.736Anolis_carolinensis
ENSEBUG00000003357-9055.833ENSANAG00000038292RBMS29553.827Aotus_nancymaae
ENSEBUG00000003357-9070.571ENSACLG00000002393rbms2a9868.956Astatotilapia_calliptera
ENSEBUG00000003357-9763.402ENSACLG00000006706rbms2b9563.660Astatotilapia_calliptera
ENSEBUG00000003357-9170.904ENSAMXG00000017399rbms2b9567.005Astyanax_mexicanus
ENSEBUG00000003357-9867.102ENSAMXG00000024719rbms2a9566.580Astyanax_mexicanus
ENSEBUG00000003357-9862.437ENSBTAG00000017830RBMS29662.944Bos_taurus
ENSEBUG00000003357-7969.123ENSCJAG00000038571-6865.300Callithrix_jacchus
ENSEBUG00000003357-9065.738ENSCJAG00000010803RBMS29663.265Callithrix_jacchus
ENSEBUG00000003357-9862.690ENSCAFG00000000134RBMS29663.198Canis_familiaris
ENSEBUG00000003357-9066.111ENSCAFG00020024460RBMS29765.489Canis_lupus_dingo
ENSEBUG00000003357-9863.859ENSCHIG00000020791RBMS29664.402Capra_hircus
ENSEBUG00000003357-9763.218ENSTSYG00000001167RBMS29563.793Carlito_syrichta
ENSEBUG00000003357-8841.720ENSCAPG00000007348-8940.909Cavia_aperea
ENSEBUG00000003357-8968.563ENSCPOG00000008256RBMS29665.217Cavia_porcellus
ENSEBUG00000003357-7861.783ENSCCAG00000030291RBMS210059.298Cebus_capucinus
ENSEBUG00000003357-9862.944ENSCATG00000003342RBMS29663.452Cercocebus_atys
ENSEBUG00000003357-9864.946ENSCLAG00000012661RBMS29664.946Chinchilla_lanigera
ENSEBUG00000003357-9862.944ENSCSAG00000005074RBMS29663.452Chlorocebus_sabaeus
ENSEBUG00000003357-9450.742ENSCHOG00000007372RBMS29645.013Choloepus_hoffmanni
ENSEBUG00000003357-9069.516ENSCPBG00000014176RBMS29665.729Chrysemys_picta_bellii
ENSEBUG00000003357-8850.794ENSCING00000006391-8349.143Ciona_intestinalis
ENSEBUG00000003357-8651.974ENSCSAVG00000004539-7451.682Ciona_savignyi
ENSEBUG00000003357-9862.944ENSCANG00000038904RBMS29663.452Colobus_angolensis_palliatus
ENSEBUG00000003357-9865.761ENSCGRG00001023923Rbms29665.761Cricetulus_griseus_chok1gshd
ENSEBUG00000003357-9865.761ENSCGRG00000017259Rbms29665.761Cricetulus_griseus_crigri
ENSEBUG00000003357-8969.649ENSCSEG00000003790rbms2a8969.040Cynoglossus_semilaevis
ENSEBUG00000003357-9067.714ENSCSEG00000008180rbms2b9767.347Cynoglossus_semilaevis
ENSEBUG00000003357-9962.051ENSCVAG00000013006rbms2b10062.051Cyprinodon_variegatus
ENSEBUG00000003357-9071.714ENSCVAG00000001635rbms2a9768.731Cyprinodon_variegatus
ENSEBUG00000003357-9866.230ENSDARG00000044179rbms2a9566.580Danio_rerio
ENSEBUG00000003357-9069.231ENSDARG00000056150rbms2b9765.810Danio_rerio
ENSEBUG00000003357-9058.402ENSDNOG00000011198RBMS29057.560Dasypus_novemcinctus
ENSEBUG00000003357-9853.261ENSDORG00000009231Rbms29653.533Dipodomys_ordii
ENSEBUG00000003357-7765.639ENSETEG00000010200RBMS27665.639Echinops_telfairi
ENSEBUG00000003357-9864.946ENSEASG00005005834RBMS29664.946Equus_asinus_asinus
ENSEBUG00000003357-9862.944ENSECAG00000013470RBMS29663.918Equus_caballus
ENSEBUG00000003357-9665.487ENSELUG00000007892rbms2b9763.588Esox_lucius
ENSEBUG00000003357-9774.453ENSELUG00000019834rbms2a9767.179Esox_lucius
ENSEBUG00000003357-9665.130ENSFCAG00000012028RBMS29662.944Felis_catus
ENSEBUG00000003357-9867.120ENSFDAG00000009949RBMS29667.120Fukomys_damarensis
ENSEBUG00000003357-9071.143ENSFHEG00000022377rbms2a9568.325Fundulus_heteroclitus
ENSEBUG00000003357-8670.903ENSFHEG00000023377rbms2b8865.110Fundulus_heteroclitus
ENSEBUG00000003357-9067.665ENSGMOG00000005250rbms2b9662.205Gadus_morhua
ENSEBUG00000003357-8671.906ENSGALG00000038757RBMS28867.989Gallus_gallus
ENSEBUG00000003357-9071.143ENSGAFG00000002548rbms2a9570.278Gambusia_affinis
ENSEBUG00000003357-9066.286ENSGAFG00000009648rbms2b8765.278Gambusia_affinis
ENSEBUG00000003357-8967.976ENSGACG00000009332rbms2b8667.552Gasterosteus_aculeatus
ENSEBUG00000003357-9071.920ENSGACG00000000617rbms2a9568.947Gasterosteus_aculeatus
ENSEBUG00000003357-9069.516ENSGAGG00000000381RBMS29566.319Gopherus_agassizii
ENSEBUG00000003357-9861.892ENSGGOG00000028247-9565.031Gorilla_gorilla
ENSEBUG00000003357-8969.329ENSHBUG00000023230rbms2a9768.421Haplochromis_burtoni
ENSEBUG00000003357-9057.670ENSHBUG00000005313rbms2b9357.064Haplochromis_burtoni
ENSEBUG00000003357-9866.304ENSHGLG00000018238RBMS29666.304Heterocephalus_glaber_female
ENSEBUG00000003357-9866.304ENSHGLG00100011594RBMS29666.304Heterocephalus_glaber_male
ENSEBUG00000003357-8675.839ENSHCOG00000020072rbms2a9569.482Hippocampus_comes
ENSEBUG00000003357-9467.062ENSHCOG00000019929rbms2b9563.918Hippocampus_comes
ENSEBUG00000003357-9070.857ENSIPUG00000021323RBMS29869.054Ictalurus_punctatus
ENSEBUG00000003357-8673.490ENSIPUG00000001757rbms2a9766.563Ictalurus_punctatus
ENSEBUG00000003357-9664.553ENSSTOG00000013442RBMS29662.437Ictidomys_tridecemlineatus
ENSEBUG00000003357-8766.346ENSJJAG00000015563-9561.247Jaculus_jaculus
ENSEBUG00000003357-9761.990ENSJJAG00000015940-9661.990Jaculus_jaculus
ENSEBUG00000003357-8670.234ENSKMAG00000021167rbms2b9561.519Kryptolebias_marmoratus
ENSEBUG00000003357-9067.714ENSLBEG00000010843rbms2b7783.735Labrus_bergylta
ENSEBUG00000003357-9070.857ENSLBEG00000017716rbms2a9667.700Labrus_bergylta
ENSEBUG00000003357-9061.602ENSLACG00000018651RBMS29560.256Latimeria_chalumnae
ENSEBUG00000003357-9071.795ENSLOCG00000006148rbms2a9071.191Lepisosteus_oculatus
ENSEBUG00000003357-8772.039ENSLAFG00000008251RBMS29465.263Loxodonta_africana
ENSEBUG00000003357-9764.058ENSMFAG00000002049RBMS29663.452Macaca_fascicularis
ENSEBUG00000003357-9764.058ENSMMUG00000019330RBMS29663.452Macaca_mulatta
ENSEBUG00000003357-9764.058ENSMNEG00000035121RBMS29663.452Macaca_nemestrina
ENSEBUG00000003357-9862.944ENSMLEG00000032780RBMS29663.452Mandrillus_leucophaeus
ENSEBUG00000003357-9072.286ENSMAMG00000003821rbms2a9768.513Mastacembelus_armatus
ENSEBUG00000003357-9166.851ENSMAMG00000007264rbms2b9066.851Mastacembelus_armatus
ENSEBUG00000003357-9763.402ENSMZEG00005027195rbms2b9563.660Maylandia_zebra
ENSEBUG00000003357-9070.571ENSMZEG00005006839rbms2a9765.816Maylandia_zebra
ENSEBUG00000003357-6953.160ENSMAUG00000016984Rbms210054.054Mesocricetus_auratus
ENSEBUG00000003357-9862.690ENSMICG00000001075RBMS29662.944Microcebus_murinus
ENSEBUG00000003357-9865.217ENSMOCG00000015140Rbms29665.135Microtus_ochrogaster
ENSEBUG00000003357-9069.143ENSMMOG00000009177rbms2b9967.297Mola_mola
ENSEBUG00000003357-8964.478ENSMMOG00000021869rbms2a9763.768Mola_mola
ENSEBUG00000003357-9071.429ENSMALG00000016900rbms2a9766.582Monopterus_albus
ENSEBUG00000003357-9068.286ENSMALG00000014520rbms2b8768.067Monopterus_albus
ENSEBUG00000003357-8967.066MGP_CAROLIEiJ_G0015921Rbms29165.143Mus_caroli
ENSEBUG00000003357-8967.365ENSMUSG00000040043Rbms29865.429Mus_musculus
ENSEBUG00000003357-9266.764MGP_PahariEiJ_G0031163Rbms28966.764Mus_pahari
ENSEBUG00000003357-8967.365MGP_SPRETEiJ_G0016746Rbms29165.429Mus_spretus
ENSEBUG00000003357-9862.437ENSMPUG00000001490-9662.437Mustela_putorius_furo
ENSEBUG00000003357-9066.111ENSMLUG00000000530RBMS29663.452Myotis_lucifugus
ENSEBUG00000003357-9865.217ENSNGAG00000001476Rbms29665.761Nannospalax_galili
ENSEBUG00000003357-8668.896ENSNBRG00000017934rbms2b9070.662Neolamprologus_brichardi
ENSEBUG00000003357-9070.857ENSNBRG00000019651rbms2a9766.071Neolamprologus_brichardi
ENSEBUG00000003357-9863.452ENSNLEG00000017466RBMS29663.959Nomascus_leucogenys
ENSEBUG00000003357-8773.222ENSMEUG00000015616RBMS28073.222Notamacropus_eugenii
ENSEBUG00000003357-5489.216ENSOPRG00000001667RBMS25289.216Ochotona_princeps
ENSEBUG00000003357-9860.490ENSODEG00000006249RBMS29660.684Octodon_degus
ENSEBUG00000003357-9067.131ENSONIG00000012198rbms2b9861.220Oreochromis_niloticus
ENSEBUG00000003357-9669.940ENSONIG00000019162rbms2a9470.621Oreochromis_niloticus
ENSEBUG00000003357-9862.944ENSOCUG00000006073RBMS29662.944Oryctolagus_cuniculus
ENSEBUG00000003357-9070.857ENSORLG00000015426rbms2a9870.000Oryzias_latipes
ENSEBUG00000003357-8769.836ENSORLG00000007807rbms2b8867.353Oryzias_latipes
ENSEBUG00000003357-9070.571ENSORLG00020016803rbms2a9765.561Oryzias_latipes_hni
ENSEBUG00000003357-9166.573ENSORLG00020007010rbms2b8965.205Oryzias_latipes_hni
ENSEBUG00000003357-9166.854ENSORLG00015022556rbms2b9365.479Oryzias_latipes_hsok
ENSEBUG00000003357-9070.571ENSORLG00015012519rbms2a9765.561Oryzias_latipes_hsok
ENSEBUG00000003357-9070.571ENSOMEG00000021369rbms2a9869.722Oryzias_melastigma
ENSEBUG00000003357-5473.262ENSOMEG00000014637-7475.132Oryzias_melastigma
ENSEBUG00000003357-9167.552ENSOMEG00000016468rbms2b9766.092Oryzias_melastigma
ENSEBUG00000003357-9664.841ENSOGAG00000003534RBMS29661.675Otolemur_garnettii
ENSEBUG00000003357-9861.675ENSOARG00000008570RBMS29662.183Ovis_aries
ENSEBUG00000003357-9065.000ENSPPAG00000033767-9662.051Pan_paniscus
ENSEBUG00000003357-9764.407ENSPPAG00000042975-9663.706Pan_paniscus
ENSEBUG00000003357-9665.130ENSPPRG00000007678RBMS210058.947Panthera_pardus
ENSEBUG00000003357-9665.130ENSPTIG00000017925RBMS210058.947Panthera_tigris_altaica
ENSEBUG00000003357-9764.407ENSPTRG00000005104RBMS29663.706Pan_troglodytes
ENSEBUG00000003357-9862.944ENSPANG00000014113RBMS29663.452Papio_anubis
ENSEBUG00000003357-8674.582ENSPKIG00000006676rbms2a9766.667Paramormyrops_kingsleyae
ENSEBUG00000003357-8968.786ENSPMGG00000022594rbms2a9465.608Periophthalmus_magnuspinnatus
ENSEBUG00000003357-9865.217ENSPEMG00000012948Rbms29665.217Peromyscus_maniculatus_bairdii
ENSEBUG00000003357-8976.375ENSPMAG00000004019-9165.657Petromyzon_marinus
ENSEBUG00000003357-9276.398ENSPMAG00000007358-9867.892Petromyzon_marinus
ENSEBUG00000003357-7175.502ENSPMAG00000004916-10062.874Petromyzon_marinus
ENSEBUG00000003357-8463.110ENSPCIG00000018048RBMS29863.110Phascolarctos_cinereus
ENSEBUG00000003357-9071.143ENSPFOG00000002734rbms2a9766.327Poecilia_formosa
ENSEBUG00000003357-9758.929ENSPFOG00000002923rbms2b9560.106Poecilia_formosa
ENSEBUG00000003357-9071.429ENSPLAG00000001303rbms2a9964.583Poecilia_latipinna
ENSEBUG00000003357-9465.103ENSPLAG00000012535-9562.341Poecilia_latipinna
ENSEBUG00000003357-9071.429ENSPMEG00000020550rbms2a9766.582Poecilia_mexicana
ENSEBUG00000003357-8959.077ENSPMEG00000015689rbms2b8958.258Poecilia_mexicana
ENSEBUG00000003357-8969.329ENSPREG00000015038rbms2a9168.421Poecilia_reticulata
ENSEBUG00000003357-9061.429ENSPREG00000020560rbms2b9360.326Poecilia_reticulata
ENSEBUG00000003357-9863.198ENSPPYG00000004665RBMS29663.706Pongo_abelii
ENSEBUG00000003357-9362.722ENSPCAG00000010311RBMS28262.426Procavia_capensis
ENSEBUG00000003357-6954.286ENSPCOG00000014899-10054.286Propithecus_coquereli
ENSEBUG00000003357-9664.841ENSPCOG00000016699-9663.198Propithecus_coquereli
ENSEBUG00000003357-9065.738ENSPVAG00000007616RBMS29662.341Pteropus_vampyrus
ENSEBUG00000003357-9070.857ENSPNYG00000020829rbms2a9766.071Pundamilia_nyererei
ENSEBUG00000003357-9763.660ENSPNYG00000017656rbms2b9563.918Pundamilia_nyererei
ENSEBUG00000003357-9071.510ENSPNAG00000019569rbms2b9770.930Pygocentrus_nattereri
ENSEBUG00000003357-9070.857ENSPNAG00000000408rbms2a9568.229Pygocentrus_nattereri
ENSEBUG00000003357-9266.667ENSRNOG00000003076Rbms28966.667Rattus_norvegicus
ENSEBUG00000003357-9862.690ENSRBIG00000036293RBMS29663.198Rhinopithecus_bieti
ENSEBUG00000003357-9862.690ENSRROG00000044831RBMS29765.489Rhinopithecus_roxellana
ENSEBUG00000003357-8963.636ENSSBOG00000028640RBMS29475.111Saimiri_boliviensis_boliviensis
ENSEBUG00000003357-5982.524ENSSHAG00000004939RBMS29576.068Sarcophilus_harrisii
ENSEBUG00000003357-8673.154ENSSFOG00015015788rbms2a9768.805Scleropages_formosus
ENSEBUG00000003357-9071.143ENSSFOG00015006642-9569.377Scleropages_formosus
ENSEBUG00000003357-9069.034ENSSMAG00000004221rbms2b9167.391Scophthalmus_maximus
ENSEBUG00000003357-8972.072ENSSMAG00000003683rbms2a9771.429Scophthalmus_maximus
ENSEBUG00000003357-9072.286ENSSDUG00000005666rbms2a9574.051Seriola_dumerili
ENSEBUG00000003357-9068.857ENSSDUG00000013574rbms2b8867.769Seriola_dumerili
ENSEBUG00000003357-9072.286ENSSLDG00000003394rbms2a9574.051Seriola_lalandi_dorsalis
ENSEBUG00000003357-9068.857ENSSLDG00000004447rbms2b9470.497Seriola_lalandi_dorsalis
ENSEBUG00000003357-6489.231ENSSARG00000012553RBMS26980.537Sorex_araneus
ENSEBUG00000003357-9072.286ENSSPAG00000000639rbms2a9771.720Stegastes_partitus
ENSEBUG00000003357-8672.575ENSSPAG00000022418rbms2b8570.755Stegastes_partitus
ENSEBUG00000003357-9864.130ENSSSCG00000000402RBMS29664.402Sus_scrofa
ENSEBUG00000003357-9070.857ENSTRUG00000008492rbms2a9766.071Takifugu_rubripes
ENSEBUG00000003357-9264.146ENSTRUG00000006839rbms2b9364.146Takifugu_rubripes
ENSEBUG00000003357-8673.841ENSTNIG00000014563rbms2a9167.109Tetraodon_nigroviridis
ENSEBUG00000003357-9166.573ENSTNIG00000015056rbms2b9165.934Tetraodon_nigroviridis
ENSEBUG00000003357-7473.158ENSTBEG00000009515RBMS27274.211Tupaia_belangeri
ENSEBUG00000003357-9061.667ENSTTRG00000002117RBMS29658.883Tursiops_truncatus
ENSEBUG00000003357-8966.561ENSUAMG00000021435RBMS29265.407Ursus_americanus
ENSEBUG00000003357-9465.294ENSUMAG00000017426RBMS28865.882Ursus_maritimus
ENSEBUG00000003357-9165.761ENSVPAG00000004022RBMS29665.761Vicugna_pacos
ENSEBUG00000003357-9863.198ENSVVUG00000021554RBMS29663.706Vulpes_vulpes
ENSEBUG00000003357-8967.847ENSXETG00000021787rbms29967.847Xenopus_tropicalis
ENSEBUG00000003357-9060.684ENSXCOG00000018635rbms2a9963.197Xiphophorus_couchianus
ENSEBUG00000003357-8670.333ENSXCOG00000006995rbms2b9167.066Xiphophorus_couchianus
ENSEBUG00000003357-8670.903ENSXMAG00000011428rbms2b9465.278Xiphophorus_maculatus
ENSEBUG00000003357-9071.143ENSXMAG00000002318rbms2a9870.278Xiphophorus_maculatus

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