EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSEBUG00000003380 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2a
Alias: zgc:56307
Full Name: ribonuclease H2%2C subunit A
Gene Type: protein_coding
Species: Eptatretus_burgeri
Status: putative
Strand: Minus strand
Length: 152697 bases
Position: chrFYBX02010184.1:3425217-3577913
Accession: ZDB-GENE-040426-976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSEBUP00000004892	RNase_HII	PF01351.18	2.8e-52	1	1
ENSEBUP00000004862	RNase_HII	PF01351.18	3e-52	1	1
ENSEBUP00000004885	RNase_HII	PF01351.18	3.8e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSEBUT00000005323	-	5279	-	ENSEBUP00000004885	361 (aa)	-	-
ENSEBUT00000005300	-	3703	-	ENSEBUP00000004862	330 (aa)	-	-
ENSEBUT00000005330	-	1840	-	ENSEBUP00000004892	324 (aa)	-	-

Gene Model

Click here to download ENSEBUG00000003380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSEBUG00000003380's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSEBUG00000003380	rnaseh2a	92	53.846	ENSG00000104889	RNASEH2A	94	57.692	Homo_sapiens
ENSEBUG00000003380	rnaseh2a	89	56.164	ENSAPOG00000004101	rnaseh2a	94	54.983	Acanthochromis_polyacanthus
ENSEBUG00000003380	rnaseh2a	92	54.817	ENSAMEG00000012323	RNASEH2A	98	54.485	Ailuropoda_melanoleuca
ENSEBUG00000003380	rnaseh2a	73	59.664	ENSACIG00000002658	rnaseh2a	93	59.664	Amphilophus_citrinellus
ENSEBUG00000003380	rnaseh2a	89	56.849	ENSAOCG00000009217	rnaseh2a	94	55.670	Amphiprion_ocellaris
ENSEBUG00000003380	rnaseh2a	89	56.849	ENSAPEG00000022937	rnaseh2a	94	55.670	Amphiprion_percula
ENSEBUG00000003380	rnaseh2a	89	57.192	ENSATEG00000000908	rnaseh2a	94	56.014	Anabas_testudineus
ENSEBUG00000003380	rnaseh2a	89	56.552	ENSACAG00000003338	RNASEH2A	94	56.552	Anolis_carolinensis
ENSEBUG00000003380	rnaseh2a	84	42.754	ENSANAG00000037932	RNASEH2A	87	42.754	Aotus_nancymaae
ENSEBUG00000003380	rnaseh2a	89	55.479	ENSACLG00000009169	rnaseh2a	94	54.296	Astatotilapia_calliptera
ENSEBUG00000003380	rnaseh2a	89	50.865	ENSAMXG00000000436	rnaseh2a	94	50.519	Astyanax_mexicanus
ENSEBUG00000003380	rnaseh2a	90	55.973	ENSBTAG00000009661	RNASEH2A	95	55.631	Bos_taurus
ENSEBUG00000003380	rnaseh2a	86	47.368	WBGene00004383	rnh-2	93	46.479	Caenorhabditis_elegans
ENSEBUG00000003380	rnaseh2a	92	52.508	ENSCJAG00000004873	RNASEH2A	97	51.667	Callithrix_jacchus
ENSEBUG00000003380	rnaseh2a	90	55.254	ENSCAFG00000017159	RNASEH2A	96	55.254	Canis_familiaris
ENSEBUG00000003380	rnaseh2a	90	55.254	ENSCAFG00020005190	RNASEH2A	58	55.254	Canis_lupus_dingo
ENSEBUG00000003380	rnaseh2a	90	55.631	ENSCHIG00000014460	RNASEH2A	95	55.290	Capra_hircus
ENSEBUG00000003380	rnaseh2a	92	52.980	ENSTSYG00000025418	RNASEH2A	97	52.508	Carlito_syrichta
ENSEBUG00000003380	rnaseh2a	59	54.974	ENSCAPG00000003411	RNASEH2A	96	53.927	Cavia_aperea
ENSEBUG00000003380	rnaseh2a	90	54.608	ENSCPOG00000038877	RNASEH2A	96	53.559	Cavia_porcellus
ENSEBUG00000003380	rnaseh2a	92	53.512	ENSCCAG00000030453	RNASEH2A	97	52.667	Cebus_capucinus
ENSEBUG00000003380	rnaseh2a	92	53.667	ENSCATG00000029609	RNASEH2A	97	53.333	Cercocebus_atys
ENSEBUG00000003380	rnaseh2a	90	53.220	ENSCLAG00000014930	RNASEH2A	96	52.542	Chinchilla_lanigera
ENSEBUG00000003380	rnaseh2a	92	53.333	ENSCSAG00000006567	RNASEH2A	97	53.000	Chlorocebus_sabaeus
ENSEBUG00000003380	rnaseh2a	92	53.691	ENSCPBG00000023909	RNASEH2A	97	52.843	Chrysemys_picta_bellii
ENSEBUG00000003380	rnaseh2a	75	53.659	ENSCING00000006190	-	81	53.750	Ciona_intestinalis
ENSEBUG00000003380	rnaseh2a	75	54.251	ENSCSAVG00000010904	-	79	56.223	Ciona_savignyi
ENSEBUG00000003380	rnaseh2a	92	53.667	ENSCANG00000027433	RNASEH2A	97	53.333	Colobus_angolensis_palliatus
ENSEBUG00000003380	rnaseh2a	90	54.266	ENSCGRG00001005021	Rnaseh2a	95	52.560	Cricetulus_griseus_chok1gshd
ENSEBUG00000003380	rnaseh2a	90	54.266	ENSCGRG00000016602	Rnaseh2a	95	52.560	Cricetulus_griseus_crigri
ENSEBUG00000003380	rnaseh2a	89	56.701	ENSCSEG00000009842	rnaseh2a	94	56.701	Cynoglossus_semilaevis
ENSEBUG00000003380	rnaseh2a	88	50.347	ENSCVAG00000021203	rnaseh2a	96	49.498	Cyprinodon_variegatus
ENSEBUG00000003380	rnaseh2a	89	55.326	ENSDARG00000018891	rnaseh2a	94	55.326	Danio_rerio
ENSEBUG00000003380	rnaseh2a	79	53.307	ENSDNOG00000036532	RNASEH2A	98	53.307	Dasypus_novemcinctus
ENSEBUG00000003380	rnaseh2a	90	53.584	ENSDORG00000009008	Rnaseh2a	95	53.584	Dipodomys_ordii
ENSEBUG00000003380	rnaseh2a	89	48.464	FBgn0031252	CG13690	83	48.464	Drosophila_melanogaster
ENSEBUG00000003380	rnaseh2a	63	48.780	ENSETEG00000001956	-	96	48.780	Echinops_telfairi
ENSEBUG00000003380	rnaseh2a	73	60.669	ENSEASG00005004118	RNASEH2A	86	60.669	Equus_asinus_asinus
ENSEBUG00000003380	rnaseh2a	92	53.846	ENSECAG00000007013	RNASEH2A	97	53.512	Equus_caballus
ENSEBUG00000003380	rnaseh2a	90	49.495	ENSEEUG00000008222	RNASEH2A	95	48.485	Erinaceus_europaeus
ENSEBUG00000003380	rnaseh2a	87	55.477	ENSELUG00000023079	rnaseh2a	93	54.694	Esox_lucius
ENSEBUG00000003380	rnaseh2a	92	53.922	ENSFCAG00000000474	RNASEH2A	98	53.156	Felis_catus
ENSEBUG00000003380	rnaseh2a	90	54.392	ENSFDAG00000003595	RNASEH2A	92	59.336	Fukomys_damarensis
ENSEBUG00000003380	rnaseh2a	92	54.333	ENSFHEG00000007682	rnaseh2a	98	54.333	Fundulus_heteroclitus
ENSEBUG00000003380	rnaseh2a	87	55.245	ENSGMOG00000005650	rnaseh2a	93	55.245	Gadus_morhua
ENSEBUG00000003380	rnaseh2a	90	55.782	ENSGALG00000052002	RNASEH2A	71	55.000	Gallus_gallus
ENSEBUG00000003380	rnaseh2a	90	55.782	ENSGAFG00000009624	rnaseh2a	96	55.782	Gambusia_affinis
ENSEBUG00000003380	rnaseh2a	89	55.593	ENSGACG00000016019	rnaseh2a	94	55.593	Gasterosteus_aculeatus
ENSEBUG00000003380	rnaseh2a	92	52.843	ENSGAGG00000013859	RNASEH2A	97	52.174	Gopherus_agassizii
ENSEBUG00000003380	rnaseh2a	92	53.846	ENSGGOG00000005846	RNASEH2A	97	53.512	Gorilla_gorilla
ENSEBUG00000003380	rnaseh2a	84	57.509	ENSHBUG00000005267	rnaseh2a	82	60.924	Haplochromis_burtoni
ENSEBUG00000003380	rnaseh2a	90	55.068	ENSHGLG00000018801	RNASEH2A	96	53.898	Heterocephalus_glaber_female
ENSEBUG00000003380	rnaseh2a	90	55.068	ENSHGLG00100015773	RNASEH2A	96	53.898	Heterocephalus_glaber_male
ENSEBUG00000003380	rnaseh2a	92	54.667	ENSHCOG00000016593	rnaseh2a	98	54.667	Hippocampus_comes
ENSEBUG00000003380	rnaseh2a	89	55.326	ENSIPUG00000024299	rnaseh2a	94	55.326	Ictalurus_punctatus
ENSEBUG00000003380	rnaseh2a	90	53.925	ENSSTOG00000006224	RNASEH2A	93	60.251	Ictidomys_tridecemlineatus
ENSEBUG00000003380	rnaseh2a	92	53.846	ENSJJAG00000017547	Rnaseh2a	97	53.846	Jaculus_jaculus
ENSEBUG00000003380	rnaseh2a	87	57.597	ENSKMAG00000019829	rnaseh2a	92	57.597	Kryptolebias_marmoratus
ENSEBUG00000003380	rnaseh2a	89	53.767	ENSLBEG00000020494	rnaseh2a	94	53.425	Labrus_bergylta
ENSEBUG00000003380	rnaseh2a	70	51.528	ENSLACG00000007789	RNASEH2A	89	51.528	Latimeria_chalumnae
ENSEBUG00000003380	rnaseh2a	89	55.172	ENSLOCG00000007890	rnaseh2a	94	55.172	Lepisosteus_oculatus
ENSEBUG00000003380	rnaseh2a	96	52.396	ENSLAFG00000015571	RNASEH2A	99	52.077	Loxodonta_africana
ENSEBUG00000003380	rnaseh2a	92	53.667	ENSMFAG00000002011	RNASEH2A	97	53.333	Macaca_fascicularis
ENSEBUG00000003380	rnaseh2a	92	53.333	ENSMMUG00000005690	RNASEH2A	97	53.000	Macaca_mulatta
ENSEBUG00000003380	rnaseh2a	90	54.209	ENSMNEG00000033054	RNASEH2A	97	53.135	Macaca_nemestrina
ENSEBUG00000003380	rnaseh2a	92	53.667	ENSMLEG00000043654	RNASEH2A	97	53.333	Mandrillus_leucophaeus
ENSEBUG00000003380	rnaseh2a	89	55.254	ENSMAMG00000003062	rnaseh2a	83	60.084	Mastacembelus_armatus
ENSEBUG00000003380	rnaseh2a	92	54.125	ENSMZEG00005023857	rnaseh2a	98	52.980	Maylandia_zebra
ENSEBUG00000003380	rnaseh2a	52	49.112	ENSMAUG00000021740	-	100	48.521	Mesocricetus_auratus
ENSEBUG00000003380	rnaseh2a	92	53.846	ENSMICG00000016430	RNASEH2A	97	53.846	Microcebus_murinus
ENSEBUG00000003380	rnaseh2a	90	54.266	ENSMOCG00000017408	Rnaseh2a	95	54.266	Microtus_ochrogaster
ENSEBUG00000003380	rnaseh2a	74	61.157	ENSMMOG00000008447	rnaseh2a	95	61.157	Mola_mola
ENSEBUG00000003380	rnaseh2a	92	53.135	ENSMODG00000006997	RNASEH2A	97	53.135	Monodelphis_domestica
ENSEBUG00000003380	rnaseh2a	89	55.822	ENSMALG00000021607	rnaseh2a	94	55.137	Monopterus_albus
ENSEBUG00000003380	rnaseh2a	87	42.289	MGP_CAROLIEiJ_G0031319	-	85	69.565	Mus_caroli
ENSEBUG00000003380	rnaseh2a	90	53.925	ENSMUSG00000052926	Rnaseh2a	85	69.565	Mus_musculus
ENSEBUG00000003380	rnaseh2a	90	52.560	MGP_PahariEiJ_G0022924	Rnaseh2a	85	69.565	Mus_pahari
ENSEBUG00000003380	rnaseh2a	90	53.925	MGP_SPRETEiJ_G0032438	Rnaseh2a	85	69.565	Mus_spretus
ENSEBUG00000003380	rnaseh2a	92	53.795	ENSMPUG00000004586	RNASEH2A	98	53.795	Mustela_putorius_furo
ENSEBUG00000003380	rnaseh2a	92	53.512	ENSMLUG00000012723	RNASEH2A	97	53.512	Myotis_lucifugus
ENSEBUG00000003380	rnaseh2a	90	53.242	ENSNGAG00000017988	Rnaseh2a	95	53.242	Nannospalax_galili
ENSEBUG00000003380	rnaseh2a	89	55.137	ENSNBRG00000018731	rnaseh2a	94	53.952	Neolamprologus_brichardi
ENSEBUG00000003380	rnaseh2a	92	53.512	ENSNLEG00000012806	RNASEH2A	97	53.177	Nomascus_leucogenys
ENSEBUG00000003380	rnaseh2a	63	58.333	ENSMEUG00000006001	RNASEH2A	96	58.333	Notamacropus_eugenii
ENSEBUG00000003380	rnaseh2a	86	45.000	ENSOPRG00000004811	RNASEH2A	91	44.286	Ochotona_princeps
ENSEBUG00000003380	rnaseh2a	90	55.290	ENSODEG00000009772	RNASEH2A	96	54.237	Octodon_degus
ENSEBUG00000003380	rnaseh2a	89	55.479	ENSONIG00000018033	rnaseh2a	94	54.795	Oreochromis_niloticus
ENSEBUG00000003380	rnaseh2a	80	51.341	ENSOANG00000009079	RNASEH2A	86	51.341	Ornithorhynchus_anatinus
ENSEBUG00000003380	rnaseh2a	87	56.140	ENSORLG00000004042	rnaseh2a	92	56.140	Oryzias_latipes
ENSEBUG00000003380	rnaseh2a	87	56.140	ENSORLG00020009483	rnaseh2a	92	56.140	Oryzias_latipes_hni
ENSEBUG00000003380	rnaseh2a	87	56.140	ENSORLG00015007548	rnaseh2a	92	56.140	Oryzias_latipes_hsok
ENSEBUG00000003380	rnaseh2a	87	56.842	ENSOMEG00000016454	rnaseh2a	89	62.338	Oryzias_melastigma
ENSEBUG00000003380	rnaseh2a	92	51.974	ENSOGAG00000012214	RNASEH2A	98	51.827	Otolemur_garnettii
ENSEBUG00000003380	rnaseh2a	90	55.973	ENSOARG00000010721	RNASEH2A	95	55.631	Ovis_aries
ENSEBUG00000003380	rnaseh2a	92	53.846	ENSPPAG00000028092	RNASEH2A	97	53.512	Pan_paniscus
ENSEBUG00000003380	rnaseh2a	92	53.922	ENSPPRG00000010585	RNASEH2A	98	53.156	Panthera_pardus
ENSEBUG00000003380	rnaseh2a	92	53.595	ENSPTIG00000013366	RNASEH2A	98	52.824	Panthera_tigris_altaica
ENSEBUG00000003380	rnaseh2a	92	53.177	ENSPTRG00000010542	RNASEH2A	97	53.177	Pan_troglodytes
ENSEBUG00000003380	rnaseh2a	92	53.667	ENSPANG00000034495	RNASEH2A	97	53.333	Papio_anubis
ENSEBUG00000003380	rnaseh2a	87	55.789	ENSPKIG00000009756	rnaseh2a	92	55.789	Paramormyrops_kingsleyae
ENSEBUG00000003380	rnaseh2a	62	54.455	ENSPSIG00000012039	RNASEH2A	100	53.465	Pelodiscus_sinensis
ENSEBUG00000003380	rnaseh2a	73	60.084	ENSPMGG00000023392	rnaseh2a	93	60.084	Periophthalmus_magnuspinnatus
ENSEBUG00000003380	rnaseh2a	90	54.422	ENSPEMG00000018009	Rnaseh2a	95	54.422	Peromyscus_maniculatus_bairdii
ENSEBUG00000003380	rnaseh2a	90	53.135	ENSPMAG00000009060	rnaseh2a	96	53.135	Petromyzon_marinus
ENSEBUG00000003380	rnaseh2a	92	52.145	ENSPCIG00000014119	RNASEH2A	97	52.145	Phascolarctos_cinereus
ENSEBUG00000003380	rnaseh2a	92	56.000	ENSPFOG00000012627	rnaseh2a	98	53.443	Poecilia_formosa
ENSEBUG00000003380	rnaseh2a	64	55.072	ENSPLAG00000018723	-	90	55.072	Poecilia_latipinna
ENSEBUG00000003380	rnaseh2a	76	61.044	ENSPLAG00000015901	rnaseh2a	98	61.044	Poecilia_latipinna
ENSEBUG00000003380	rnaseh2a	68	52.511	ENSPMEG00000009032	-	99	52.511	Poecilia_mexicana
ENSEBUG00000003380	rnaseh2a	76	60.643	ENSPMEG00000000647	rnaseh2a	98	60.643	Poecilia_mexicana
ENSEBUG00000003380	rnaseh2a	92	54.667	ENSPREG00000015015	rnaseh2a	98	54.667	Poecilia_reticulata
ENSEBUG00000003380	rnaseh2a	92	53.333	ENSPPYG00000009608	RNASEH2A	97	53.000	Pongo_abelii
ENSEBUG00000003380	rnaseh2a	92	53.846	ENSPCAG00000015319	RNASEH2A	97	53.512	Procavia_capensis
ENSEBUG00000003380	rnaseh2a	92	53.512	ENSPCOG00000003686	RNASEH2A	97	53.846	Propithecus_coquereli
ENSEBUG00000003380	rnaseh2a	89	41.356	ENSPVAG00000014703	RNASEH2A	95	41.297	Pteropus_vampyrus
ENSEBUG00000003380	rnaseh2a	90	51.852	ENSPNYG00000023986	rnaseh2a	95	50.676	Pundamilia_nyererei
ENSEBUG00000003380	rnaseh2a	89	55.326	ENSPNAG00000021017	rnaseh2a	94	55.326	Pygocentrus_nattereri
ENSEBUG00000003380	rnaseh2a	92	52.318	ENSRNOG00000003504	Rnaseh2a	97	51.987	Rattus_norvegicus
ENSEBUG00000003380	rnaseh2a	92	54.000	ENSRBIG00000023554	RNASEH2A	97	53.667	Rhinopithecus_bieti
ENSEBUG00000003380	rnaseh2a	92	54.000	ENSRROG00000043799	RNASEH2A	97	53.667	Rhinopithecus_roxellana
ENSEBUG00000003380	rnaseh2a	74	41.634	YNL072W	RNH201	81	42.126	Saccharomyces_cerevisiae
ENSEBUG00000003380	rnaseh2a	92	53.512	ENSSBOG00000033164	RNASEH2A	97	52.667	Saimiri_boliviensis_boliviensis
ENSEBUG00000003380	rnaseh2a	96	49.216	ENSSHAG00000015552	RNASEH2A	99	49.216	Sarcophilus_harrisii
ENSEBUG00000003380	rnaseh2a	87	56.140	ENSSFOG00015009692	rnaseh2a	92	56.140	Scleropages_formosus
ENSEBUG00000003380	rnaseh2a	89	56.507	ENSSMAG00000013986	rnaseh2a	93	57.196	Scophthalmus_maximus
ENSEBUG00000003380	rnaseh2a	85	56.884	ENSSDUG00000005280	rnaseh2a	82	61.345	Seriola_dumerili
ENSEBUG00000003380	rnaseh2a	89	54.639	ENSSLDG00000023766	rnaseh2a	94	54.639	Seriola_lalandi_dorsalis
ENSEBUG00000003380	rnaseh2a	90	55.442	ENSSPAG00000012769	rnaseh2a	94	55.670	Stegastes_partitus
ENSEBUG00000003380	rnaseh2a	92	53.512	ENSSSCG00000013737	RNASEH2A	97	53.512	Sus_scrofa
ENSEBUG00000003380	rnaseh2a	89	55.442	ENSTRUG00000000049	rnaseh2a	95	55.442	Takifugu_rubripes
ENSEBUG00000003380	rnaseh2a	90	55.593	ENSTNIG00000004533	rnaseh2a	95	55.593	Tetraodon_nigroviridis
ENSEBUG00000003380	rnaseh2a	63	60.976	ENSTTRG00000003592	RNASEH2A	96	60.976	Tursiops_truncatus
ENSEBUG00000003380	rnaseh2a	92	55.150	ENSUAMG00000019593	RNASEH2A	98	54.817	Ursus_americanus
ENSEBUG00000003380	rnaseh2a	69	61.504	ENSUMAG00000006254	-	71	61.504	Ursus_maritimus
ENSEBUG00000003380	rnaseh2a	89	55.172	ENSXETG00000004762	rnaseh2a	94	55.172	Xenopus_tropicalis
ENSEBUG00000003380	rnaseh2a	92	55.333	ENSXCOG00000013485	rnaseh2a	98	55.333	Xiphophorus_couchianus
ENSEBUG00000003380	rnaseh2a	92	55.000	ENSXMAG00000006953	rnaseh2a	98	55.000	Xiphophorus_maculatus